RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 NISCHQ9Y2I1 1504 aa31.48■■■□□ 2.63
SNRNP27-203ENST00000450162 CCDC180Q9P1Z9 1646 aa27.94■■■□□ 2.06
SNRNP27-203ENST00000450162 ABCC9O60706 1549 aa27.24■■□□□ 1.95
SNRNP27-203ENST00000450162 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
SNRNP27-203ENST00000450162 NACADO15069 1562 aa26.31■■□□□ 1.8
SNRNP27-203ENST00000450162 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
SNRNP27-203ENST00000450162 DCAF8L2P0C7V8 631 aa26.29■■□□□ 1.8
SNRNP27-203ENST00000450162 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
SNRNP27-203ENST00000450162 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
SNRNP27-203ENST00000450162 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
SNRNP27-203ENST00000450162 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
SNRNP27-203ENST00000450162 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
SNRNP27-203ENST00000450162 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
SNRNP27-203ENST00000450162 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
SNRNP27-203ENST00000450162 SCRIBQ14160 1630 aa25.42■■□□□ 1.66
SNRNP27-203ENST00000450162 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
SNRNP27-203ENST00000450162 DNAJC5BQ9UF47 199 aa24.95■■□□□ 1.58
SNRNP27-203ENST00000450162 EIF4G1Q04637 1599 aaKnown RBP24.78■■□□□ 1.56
SNRNP27-203ENST00000450162 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.54
SNRNP27-203ENST00000450162 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
SNRNP27-203ENST00000450162 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
SNRNP27-203ENST00000450162 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
SNRNP27-203ENST00000450162 NCAPD3P42695 1498 aa24.3■■□□□ 1.48
SNRNP27-203ENST00000450162 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
SNRNP27-203ENST00000450162 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
SNRNP27-203ENST00000450162 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
SNRNP27-203ENST00000450162 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
SNRNP27-203ENST00000450162 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
SNRNP27-203ENST00000450162 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
SNRNP27-203ENST00000450162 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
SNRNP27-203ENST00000450162 WIZO95785 1651 aa23.92■■□□□ 1.42
SNRNP27-203ENST00000450162 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
SNRNP27-203ENST00000450162 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
SNRNP27-203ENST00000450162 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
SNRNP27-203ENST00000450162 NESP48681 1621 aa23.56■■□□□ 1.36
SNRNP27-203ENST00000450162 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
SNRNP27-203ENST00000450162 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
SNRNP27-203ENST00000450162 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
SNRNP27-203ENST00000450162 CFTRP13569 1480 aa23.44■■□□□ 1.34
SNRNP27-203ENST00000450162 SUPT5HO00267 1087 aaKnown RBP23.44■■□□□ 1.34
SNRNP27-203ENST00000450162 CUX2O14529 1486 aa23.3■■□□□ 1.32
SNRNP27-203ENST00000450162 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
SNRNP27-203ENST00000450162 KIF21AQ7Z4S6 1674 aa23.25■■□□□ 1.31
SNRNP27-203ENST00000450162 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
SNRNP27-203ENST00000450162 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
SNRNP27-203ENST00000450162 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
SNRNP27-203ENST00000450162 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
SNRNP27-203ENST00000450162 WDR62O43379 1518 aa23.09■■□□□ 1.29
SNRNP27-203ENST00000450162 ABCC8Q09428 1581 aa23■■□□□ 1.27
SNRNP27-203ENST00000450162 URB2Q14146 1524 aaKnown RBP22.99■■□□□ 1.27
SNRNP27-203ENST00000450162 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
SNRNP27-203ENST00000450162 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
SNRNP27-203ENST00000450162 IFT140Q96RY7 1462 aa22.78■■□□□ 1.24
SNRNP27-203ENST00000450162 CUX1P39880 1505 aa22.71■■□□□ 1.23
SNRNP27-203ENST00000450162 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
SNRNP27-203ENST00000450162 SOGA1O94964 1423 aa22.65■■□□□ 1.22
SNRNP27-203ENST00000450162 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
SNRNP27-203ENST00000450162 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
SNRNP27-203ENST00000450162 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
SNRNP27-203ENST00000450162 ZNF608Q9ULD9 1512 aaPredicted RBP22.58■■□□□ 1.21
SNRNP27-203ENST00000450162 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
SNRNP27-203ENST00000450162 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
SNRNP27-203ENST00000450162 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
SNRNP27-203ENST00000450162 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
SNRNP27-203ENST00000450162 DNAJC5Q9H3Z4 198 aa22.53■■□□□ 1.2
SNRNP27-203ENST00000450162 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
SNRNP27-203ENST00000450162 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
SNRNP27-203ENST00000450162 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.198e-9■□□□□ 8.7
SNRNP27-203ENST00000450162 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
SNRNP27-203ENST00000450162 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
SNRNP27-203ENST00000450162 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
SNRNP27-203ENST00000450162 OSCARQ8IYS5 282 aa22.39■■□□□ 1.17
SNRNP27-203ENST00000450162 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
SNRNP27-203ENST00000450162 GAPVD1Q14C86 1478 aa22.38■■□□□ 1.17
SNRNP27-203ENST00000450162 MAGI1Q96QZ7 1491 aaPredicted RBP22.32■■□□□ 1.16
SNRNP27-203ENST00000450162 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
SNRNP27-203ENST00000450162 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
SNRNP27-203ENST00000450162 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
SNRNP27-203ENST00000450162 FBLN2P98095 1184 aa22.25■■□□□ 1.15
SNRNP27-203ENST00000450162 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
SNRNP27-203ENST00000450162 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
SNRNP27-203ENST00000450162 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
SNRNP27-203ENST00000450162 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
SNRNP27-203ENST00000450162 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
SNRNP27-203ENST00000450162 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
SNRNP27-203ENST00000450162 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
SNRNP27-203ENST00000450162 CHD1O14646 1710 aa22.15■■□□□ 1.14
SNRNP27-203ENST00000450162 IGF1RP08069 1367 aa22.1■■□□□ 1.13
SNRNP27-203ENST00000450162 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
SNRNP27-203ENST00000450162 GRIN2AQ12879 1464 aa22.07■■□□□ 1.12
SNRNP27-203ENST00000450162 CUL7Q14999 1698 aa21.99■■□□□ 1.11
SNRNP27-203ENST00000450162 NUP160Q12769 1436 aa21.98■■□□□ 1.11
SNRNP27-203ENST00000450162 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
SNRNP27-203ENST00000450162 CARMIL1Q5VZK9 1371 aa21.98■■□□□ 1.11
SNRNP27-203ENST00000450162 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
SNRNP27-203ENST00000450162 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
SNRNP27-203ENST00000450162 CEP170Q5SW79 1584 aa21.89■■□□□ 1.09
SNRNP27-203ENST00000450162 EEA1Q15075 1411 aa21.87■■□□□ 1.09
SNRNP27-203ENST00000450162 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
SNRNP27-203ENST00000450162 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms