RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
PCDH15-219ENST00000448885 NISCHQ9Y2I1 1504 aa10.26□□□□□ -0.77
PCDH15-219ENST00000448885 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
PCDH15-219ENST00000448885 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
PCDH15-219ENST00000448885 APLP2Q06481 763 aa9.68□□□□□ -0.86
PCDH15-219ENST00000448885 FAM9AQ8IZU1 332 aaPredicted RBP9.66□□□□□ -0.86
PCDH15-219ENST00000448885 EHMT2Q96KQ7 1210 aa9.62□□□□□ -0.87
PCDH15-219ENST00000448885 ERICH6Q7L0X2 663 aa9.6□□□□□ -0.87
PCDH15-219ENST00000448885 CCDC180Q9P1Z9 1646 aa9.57□□□□□ -0.88
PCDH15-219ENST00000448885 CCER1Q8TC90 406 aaPredicted RBP9.56□□□□□ -0.88
PCDH15-219ENST00000448885 SHROOM4Q9ULL8 1493 aa9.56□□□□□ -0.88
PCDH15-219ENST00000448885 MYO15BQ96JP2 1530 aa9.53□□□□□ -0.88
PCDH15-219ENST00000448885 CENPBP07199 599 aaPredicted RBP9.41□□□□□ -0.9
PCDH15-219ENST00000448885 DCAF1Q9Y4B6 1507 aa9.4□□□□□ -0.9
PCDH15-219ENST00000448885 TTBK1Q5TCY1 1321 aaPredicted RBP9.34□□□□□ -0.91
PCDH15-219ENST00000448885 ZEB1P37275 1124 aaPredicted RBP9.33□□□□□ -0.92
PCDH15-219ENST00000448885 NEFLP07196 543 aa9.29□□□□□ -0.92
PCDH15-219ENST00000448885 PCGF6Q9BYE7 350 aa9.27□□□□□ -0.93
PCDH15-219ENST00000448885 MYT1Q01538 1121 aa9.27□□□□□ -0.93
PCDH15-219ENST00000448885 ATP1B4Q9UN42 357 aaPredicted RBP9.25□□□□□ -0.93
PCDH15-219ENST00000448885 RANGAP1P46060 587 aaPredicted RBP9.23□□□□□ -0.93
PCDH15-219ENST00000448885 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.95
PCDH15-219ENST00000448885 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
PCDH15-219ENST00000448885 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
PCDH15-219ENST00000448885 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
PCDH15-219ENST00000448885 MYT1LQ9UL68 1186 aa9.01□□□□□ -0.97
PCDH15-219ENST00000448885 POLR3GLQ9BT43 218 aa8.95□□□□□ -0.98
PCDH15-219ENST00000448885 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
PCDH15-219ENST00000448885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.91□□□□□ -0.98
PCDH15-219ENST00000448885 HNRNPUL2Q1KMD3 747 aaKnown RBP8.91□□□□□ -0.98
PCDH15-219ENST00000448885 ZCCHC6Q5VYS8 1495 aaKnown RBP8.88□□□□□ -0.99
PCDH15-219ENST00000448885 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
PCDH15-219ENST00000448885 SLC4A1APQ9BWU0 796 aaKnown RBP8.86□□□□□ -0.99
PCDH15-219ENST00000448885 TRIM26Q12899 539 aaPredicted RBP8.86□□□□□ -0.99
PCDH15-219ENST00000448885 CLSPNQ9HAW4 1339 aa8.84□□□□□ -0.99
PCDH15-219ENST00000448885 ITGAEP38570 1179 aa8.84□□□□□ -0.99
PCDH15-219ENST00000448885 PPARGC1BQ86YN6 1023 aaKnown RBP8.82□□□□□ -1
PCDH15-219ENST00000448885 CHIC1Q5VXU3 224 aa8.8□□□□□ -1
PCDH15-219ENST00000448885 CNGB1Q14028 1251 aaPredicted RBP8.77□□□□□ -1.01
PCDH15-219ENST00000448885 HRCP23327 699 aa8.74□□□□□ -1.01
PCDH15-219ENST00000448885 ZBTB47Q9UFB7 747 aaPredicted RBP8.74□□□□□ -1.01
PCDH15-219ENST00000448885 TRIM52Q96A61 297 aa8.66□□□□□ -1.02
PCDH15-219ENST00000448885 PEG3Q9GZU2 1588 aa8.65□□□□□ -1.02
PCDH15-219ENST00000448885 FAM50AQ14320 339 aaKnown RBP8.64□□□□□ -1.03
PCDH15-219ENST00000448885 CANXP27824 592 aaKnown RBP8.63□□□□□ -1.03
PCDH15-219ENST00000448885 CDK11AQ9UQ88 783 aaPredicted RBP8.62□□□□□ -1.03
PCDH15-219ENST00000448885 DIEXFQ68CQ4 756 aaKnown RBP8.61□□□□□ -1.03
PCDH15-219ENST00000448885 NEFMP07197 916 aa8.6□□□□□ -1.03
PCDH15-219ENST00000448885 SLC24A1O60721 1099 aa8.59□□□□□ -1.03
PCDH15-219ENST00000448885 ANP32CO43423 234 aa8.59□□□□□ -1.03
PCDH15-219ENST00000448885 NEUROD1Q13562 356 aa8.56□□□□□ -1.04
PCDH15-219ENST00000448885 ZNF326Q5BKZ1 582 aaKnown RBP8.54□□□□□ -1.04
PCDH15-219ENST00000448885 BCANQ96GW7 911 aa8.54□□□□□ -1.04
PCDH15-219ENST00000448885 BICRAQ9NZM4 1560 aa8.53□□□□□ -1.04
PCDH15-219ENST00000448885 LOC105371045A0A1W2PR82 267 aa8.52□□□□□ -1.05
PCDH15-219ENST00000448885 ANP32BQ92688 251 aaKnown RBP8.51□□□□□ -1.05
PCDH15-219ENST00000448885 ANP32AP39687 249 aaKnown RBP8.51□□□□□ -1.05
PCDH15-219ENST00000448885 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
PCDH15-219ENST00000448885 EIF4G1Q04637 1599 aaKnown RBP8.49□□□□□ -1.05
PCDH15-219ENST00000448885 NACADO15069 1562 aa8.49□□□□□ -1.05
PCDH15-219ENST00000448885 UNC13AQ9UPW8 1703 aa8.45□□□□□ -1.06
PCDH15-219ENST00000448885 GTF3C3Q9Y5Q9 886 aa8.43□□□□□ -1.06
PCDH15-219ENST00000448885 HSP90AA1P07900 732 aaKnown RBP8.42□□□□□ -1.06
PCDH15-219ENST00000448885 FBLN2P98095 1184 aa8.41□□□□□ -1.06
PCDH15-219ENST00000448885 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
PCDH15-219ENST00000448885 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
PCDH15-219ENST00000448885 ESF1Q9H501 851 aaKnown RBP8.4□□□□□ -1.07
PCDH15-219ENST00000448885 GLIPR1L2Q4G1C9 344 aa8.39□□□□□ -1.07
PCDH15-219ENST00000448885 CDK11BP21127 795 aaKnown RBP8.36□□□□□ -1.07
PCDH15-219ENST00000448885 STAG3Q9UJ98 1225 aa8.35□□□□□ -1.07
PCDH15-219ENST00000448885 ZNF777Q9ULD5 760 aaPredicted RBP8.33□□□□□ -1.08
PCDH15-219ENST00000448885 EIF5BO60841 1220 aaKnown RBP8.33□□□□□ -1.08
PCDH15-219ENST00000448885 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.31□□□□□ -1.08
PCDH15-219ENST00000448885 PABPN1Q86U42 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
PCDH15-219ENST00000448885 CHGAP10645 457 aaKnown RBP8.29□□□□□ -1.08
PCDH15-219ENST00000448885 ARID3CA6NKF2 412 aa8.29□□□□□ -1.08
PCDH15-219ENST00000448885 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
PCDH15-219ENST00000448885 TONSLQ96HA7 1378 aa8.28□□□□□ -1.08
PCDH15-219ENST00000448885 MYH16Q9H6N6 1097 aa8.27□□□□□ -1.09
PCDH15-219ENST00000448885 P3H3Q8IVL6 736 aa8.26□□□□□ -1.09
PCDH15-219ENST00000448885 FKBP8Q14318 412 aa8.26□□□□□ -1.09
PCDH15-219ENST00000448885 WDR43Q15061 677 aaKnown RBP eCLIP8.25□□□□□ -1.09
PCDH15-219ENST00000448885 ABCC9O60706 1549 aa8.24□□□□□ -1.09
PCDH15-219ENST00000448885 PLPPR3Q6T4P5 718 aa8.23□□□□□ -1.09
PCDH15-219ENST00000448885 NPM1P06748 294 aaKnown RBP eCLIP8.23□□□□□ -1.09
PCDH15-219ENST00000448885 NCLP19338 710 aaKnown RBP8.23□□□□□ -1.09
PCDH15-219ENST00000448885 HNRNPUQ00839 825 aaKnown RBP eCLIP8.22□□□□□ -1.09
PCDH15-219ENST00000448885 FAM9BQ8IZU0 186 aa8.22□□□□□ -1.09
PCDH15-219ENST00000448885 SCAF1Q9H7N4 1312 aaKnown RBP8.21□□□□□ -1.1
PCDH15-219ENST00000448885 CCDC136Q96JN2 1154 aa8.2□□□□□ -1.1
PCDH15-219ENST00000448885 DDRGK1Q96HY6 314 aa8.2□□□□□ -1.1
PCDH15-219ENST00000448885 TMC1Q8TDI8 760 aa8.18□□□□□ -1.1
PCDH15-219ENST00000448885 BECN1Q14457 450 aa8.18□□□□□ -1.1
PCDH15-219ENST00000448885 ARXQ96QS3 562 aa8.18□□□□□ -1.1
PCDH15-219ENST00000448885 NBR1Q14596 966 aa8.18□□□□□ -1.1
PCDH15-219ENST00000448885 ANP32EQ9BTT0 268 aa8.17□□□□□ -1.1
PCDH15-219ENST00000448885 CSRNP3Q8WYN3 585 aa8.17□□□□□ -1.1
PCDH15-219ENST00000448885 GOLGA6L22H0YM25 854 aa8.17□□□□□ -1.1
PCDH15-219ENST00000448885 A0A0G2JS52 829 aa8.16□□□□□ -1.1
PCDH15-219ENST00000448885 CASC1Q6TDU7 716 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms