RNA–Protein interactions for RNA: ENST00000448861.5

MUC4-207, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,944 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-207ENST00000448861 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
MUC4-207ENST00000448861 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
MUC4-207ENST00000448861 DCAF8L2P0C7V8 631 aa19.65■□□□□ 0.74
MUC4-207ENST00000448861 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
MUC4-207ENST00000448861 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
MUC4-207ENST00000448861 HRCP23327 699 aa18.62■□□□□ 0.57
MUC4-207ENST00000448861 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
MUC4-207ENST00000448861 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
MUC4-207ENST00000448861 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
MUC4-207ENST00000448861 ZEB1P37275 1124 aaPredicted RBP18.33■□□□□ 0.53
MUC4-207ENST00000448861 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
MUC4-207ENST00000448861 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
MUC4-207ENST00000448861 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
MUC4-207ENST00000448861 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
MUC4-207ENST00000448861 ZCCHC6Q5VYS8 1495 aaKnown RBP18.1■□□□□ 0.49
MUC4-207ENST00000448861 PELP1Q8IZL8 1130 aaKnown RBP18.03■□□□□ 0.48
MUC4-207ENST00000448861 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
MUC4-207ENST00000448861 TTBK1Q5TCY1 1321 aaPredicted RBP17.88■□□□□ 0.45
MUC4-207ENST00000448861 CENPBP07199 599 aaPredicted RBP17.87■□□□□ 0.45
MUC4-207ENST00000448861 MYO15BQ96JP2 1530 aa17.85■□□□□ 0.45
MUC4-207ENST00000448861 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
MUC4-207ENST00000448861 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
MUC4-207ENST00000448861 APLP2Q06481 763 aa17.77■□□□□ 0.44
MUC4-207ENST00000448861 UBTFP17480 764 aaKnown RBP17.66■□□□□ 0.42
MUC4-207ENST00000448861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
MUC4-207ENST00000448861 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
MUC4-207ENST00000448861 DIEXFQ68CQ4 756 aaKnown RBP17.44■□□□□ 0.38
MUC4-207ENST00000448861 RANGAP1P46060 587 aaPredicted RBP17.44■□□□□ 0.38
MUC4-207ENST00000448861 MYT1Q01538 1121 aa17.43■□□□□ 0.38
MUC4-207ENST00000448861 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
MUC4-207ENST00000448861 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
MUC4-207ENST00000448861 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
MUC4-207ENST00000448861 ABCC9O60706 1549 aa17.27■□□□□ 0.36
MUC4-207ENST00000448861 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
MUC4-207ENST00000448861 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
MUC4-207ENST00000448861 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
MUC4-207ENST00000448861 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
MUC4-207ENST00000448861 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
MUC4-207ENST00000448861 NEUROD1Q13562 356 aa17.06■□□□□ 0.32
MUC4-207ENST00000448861 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
MUC4-207ENST00000448861 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
MUC4-207ENST00000448861 NEFLP07196 543 aa16.98■□□□□ 0.31
MUC4-207ENST00000448861 ITGAEP38570 1179 aa16.97■□□□□ 0.31
MUC4-207ENST00000448861 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
MUC4-207ENST00000448861 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
MUC4-207ENST00000448861 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
MUC4-207ENST00000448861 NACADO15069 1562 aa16.82■□□□□ 0.28
MUC4-207ENST00000448861 EEA1Q15075 1411 aa16.8■□□□□ 0.28
MUC4-207ENST00000448861 ERICH6Q7L0X2 663 aa16.8■□□□□ 0.28
MUC4-207ENST00000448861 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
MUC4-207ENST00000448861 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
MUC4-207ENST00000448861 MIER1Q8N108 512 aa16.74■□□□□ 0.27
MUC4-207ENST00000448861 GOLGA3Q08378 1498 aa16.71■□□□□ 0.27
MUC4-207ENST00000448861 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
MUC4-207ENST00000448861 CLIP1P30622 1438 aa16.69■□□□□ 0.26
MUC4-207ENST00000448861 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
MUC4-207ENST00000448861 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.26
MUC4-207ENST00000448861 SOGA1O94964 1423 aa16.6■□□□□ 0.25
MUC4-207ENST00000448861 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
MUC4-207ENST00000448861 BCANQ96GW7 911 aa16.58■□□□□ 0.24
MUC4-207ENST00000448861 WIZO95785 1651 aa16.56■□□□□ 0.24
MUC4-207ENST00000448861 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
MUC4-207ENST00000448861 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
MUC4-207ENST00000448861 ABCC8Q09428 1581 aa16.54■□□□□ 0.24
MUC4-207ENST00000448861 ANP32CO43423 234 aa16.52■□□□□ 0.24
MUC4-207ENST00000448861 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
MUC4-207ENST00000448861 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
MUC4-207ENST00000448861 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
MUC4-207ENST00000448861 FKBP8Q14318 412 aa16.39■□□□□ 0.22
MUC4-207ENST00000448861 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
MUC4-207ENST00000448861 BAZ1BQ9UIG0 1483 aaKnown RBP16.33■□□□□ 0.2
MUC4-207ENST00000448861 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
MUC4-207ENST00000448861 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
MUC4-207ENST00000448861 CDK11AQ9UQ88 783 aaPredicted RBP16.31■□□□□ 0.2
MUC4-207ENST00000448861 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
MUC4-207ENST00000448861 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
MUC4-207ENST00000448861 SUPT16HQ9Y5B9 1047 aaKnown RBP16.28■□□□□ 0.2
MUC4-207ENST00000448861 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.19
MUC4-207ENST00000448861 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
MUC4-207ENST00000448861 SMARCA4P51532 1647 aa16.24■□□□□ 0.19
MUC4-207ENST00000448861 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
MUC4-207ENST00000448861 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
MUC4-207ENST00000448861 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
MUC4-207ENST00000448861 KANK4Q5T7N3 995 aaPredicted RBP16.18■□□□□ 0.18
MUC4-207ENST00000448861 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
MUC4-207ENST00000448861 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
MUC4-207ENST00000448861 ANP32EQ9BTT0 268 aa16.13■□□□□ 0.17
MUC4-207ENST00000448861 SIN3AQ96ST3 1273 aa16.11■□□□□ 0.17
MUC4-207ENST00000448861 DHX57Q6P158 1386 aaKnown RBP16.11■□□□□ 0.17
MUC4-207ENST00000448861 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
MUC4-207ENST00000448861 MTUS2Q5JR59 1369 aa16.09■□□□□ 0.17
MUC4-207ENST00000448861 TIMELESSQ9UNS1 1208 aa16.06■□□□□ 0.16
MUC4-207ENST00000448861 ZNF326Q5BKZ1 582 aaKnown RBP16.05■□□□□ 0.16
MUC4-207ENST00000448861 RAB3GAP2Q9H2M9 1393 aa16.04■□□□□ 0.16
MUC4-207ENST00000448861 SETD5Q9C0A6 1442 aa16.04■□□□□ 0.16
MUC4-207ENST00000448861 FAM9BQ8IZU0 186 aa16.02■□□□□ 0.16
MUC4-207ENST00000448861 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
MUC4-207ENST00000448861 FHAD1B1AJZ9 1412 aa16.01■□□□□ 0.15
MUC4-207ENST00000448861 TSHZ2Q9NRE2 1034 aa16■□□□□ 0.15
MUC4-207ENST00000448861 CHIC2Q9UKJ5 165 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms