RNA–Protein interactions for RNA: ENST00000447715.6

PPFIA4-204, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 6,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-204ENST00000447715 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
PPFIA4-204ENST00000447715 PELP1Q8IZL8 1130 aaKnown RBP21.86■■□□□ 1.09
PPFIA4-204ENST00000447715 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.06
PPFIA4-204ENST00000447715 EHMT2Q96KQ7 1210 aa21.52■■□□□ 1.04
PPFIA4-204ENST00000447715 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
PPFIA4-204ENST00000447715 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
PPFIA4-204ENST00000447715 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.93
PPFIA4-204ENST00000447715 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
PPFIA4-204ENST00000447715 APLP2Q06481 763 aa20.82■□□□□ 0.92
PPFIA4-204ENST00000447715 MYT1Q01538 1121 aa20.81■□□□□ 0.92
PPFIA4-204ENST00000447715 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
PPFIA4-204ENST00000447715 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
PPFIA4-204ENST00000447715 PCGF6Q9BYE7 350 aa20.52■□□□□ 0.88
PPFIA4-204ENST00000447715 FAM9AQ8IZU1 332 aaPredicted RBP20.4■□□□□ 0.86
PPFIA4-204ENST00000447715 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
PPFIA4-204ENST00000447715 NEFLP07196 543 aa20.36■□□□□ 0.85
PPFIA4-204ENST00000447715 RANGAP1P46060 587 aaPredicted RBP20.36■□□□□ 0.85
PPFIA4-204ENST00000447715 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
PPFIA4-204ENST00000447715 DAXXQ9UER7 740 aaPredicted RBP20.15■□□□□ 0.82
PPFIA4-204ENST00000447715 ZEB1P37275 1124 aaPredicted RBP19.91■□□□□ 0.78
PPFIA4-204ENST00000447715 POLR3GLQ9BT43 218 aa19.82■□□□□ 0.76
PPFIA4-204ENST00000447715 CNGB1Q14028 1251 aaPredicted RBP19.77■□□□□ 0.76
PPFIA4-204ENST00000447715 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
PPFIA4-204ENST00000447715 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
PPFIA4-204ENST00000447715 RTL5Q5HYW3 569 aaPredicted RBP19.61■□□□□ 0.73
PPFIA4-204ENST00000447715 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
PPFIA4-204ENST00000447715 MYT1LQ9UL68 1186 aa19.58■□□□□ 0.72
PPFIA4-204ENST00000447715 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
PPFIA4-204ENST00000447715 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
PPFIA4-204ENST00000447715 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
PPFIA4-204ENST00000447715 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
PPFIA4-204ENST00000447715 ITGAEP38570 1179 aa19.41■□□□□ 0.7
PPFIA4-204ENST00000447715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
PPFIA4-204ENST00000447715 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
PPFIA4-204ENST00000447715 BCL11AQ9H165 835 aa19.21■□□□□ 0.67
PPFIA4-204ENST00000447715 HRCP23327 699 aa19.15■□□□□ 0.66
PPFIA4-204ENST00000447715 BCANQ96GW7 911 aa19.14■□□□□ 0.65
PPFIA4-204ENST00000447715 ZBTB47Q9UFB7 747 aaPredicted RBP19.01■□□□□ 0.63
PPFIA4-204ENST00000447715 SLC24A1O60721 1099 aa19■□□□□ 0.63
PPFIA4-204ENST00000447715 EIF5BO60841 1220 aaKnown RBP19■□□□□ 0.63
PPFIA4-204ENST00000447715 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
PPFIA4-204ENST00000447715 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
PPFIA4-204ENST00000447715 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
PPFIA4-204ENST00000447715 ABCC9O60706 1549 aa18.81■□□□□ 0.6
PPFIA4-204ENST00000447715 CANXP27824 592 aaKnown RBP18.79■□□□□ 0.6
PPFIA4-204ENST00000447715 NPM2Q86SE8 214 aaKnown RBP18.75■□□□□ 0.59
PPFIA4-204ENST00000447715 GTF3C3Q9Y5Q9 886 aa18.72■□□□□ 0.59
PPFIA4-204ENST00000447715 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
PPFIA4-204ENST00000447715 ZNF326Q5BKZ1 582 aaKnown RBP18.68■□□□□ 0.58
PPFIA4-204ENST00000447715 TRIM52Q96A61 297 aa18.68■□□□□ 0.58
PPFIA4-204ENST00000447715 ANP32BQ92688 251 aaKnown RBP18.64■□□□□ 0.57
PPFIA4-204ENST00000447715 FAM50AQ14320 339 aaKnown RBP18.62■□□□□ 0.57
PPFIA4-204ENST00000447715 ANP32AP39687 249 aaKnown RBP18.61■□□□□ 0.57
PPFIA4-204ENST00000447715 LOC105371045A0A1W2PR82 267 aa18.59■□□□□ 0.57
PPFIA4-204ENST00000447715 GLIPR1L2Q4G1C9 344 aa18.58■□□□□ 0.56
PPFIA4-204ENST00000447715 ANP32CO43423 234 aa18.55■□□□□ 0.56
PPFIA4-204ENST00000447715 ARXQ96QS3 562 aa18.55■□□□□ 0.56
PPFIA4-204ENST00000447715 HSP90AA1P07900 732 aaKnown RBP18.54■□□□□ 0.56
PPFIA4-204ENST00000447715 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
PPFIA4-204ENST00000447715 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.55
PPFIA4-204ENST00000447715 NEFMP07197 916 aa18.49■□□□□ 0.55
PPFIA4-204ENST00000447715 NBR1Q14596 966 aa18.37■□□□□ 0.53
PPFIA4-204ENST00000447715 CDK11BP21127 795 aaKnown RBP18.31■□□□□ 0.52
PPFIA4-204ENST00000447715 UPF2Q9HAU5 1272 aaKnown RBP18.26■□□□□ 0.51
PPFIA4-204ENST00000447715 FBLN2P98095 1184 aa18.23■□□□□ 0.51
PPFIA4-204ENST00000447715 FKBP8Q14318 412 aa18.2■□□□□ 0.5
PPFIA4-204ENST00000447715 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
PPFIA4-204ENST00000447715 SALL2Q9Y467 1007 aaPredicted RBP18.17■□□□□ 0.5
PPFIA4-204ENST00000447715 TULP1O00294 542 aaPredicted RBP18.11■□□□□ 0.49
PPFIA4-204ENST00000447715 SCRIBQ14160 1630 aa18.11■□□□□ 0.49
PPFIA4-204ENST00000447715 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
PPFIA4-204ENST00000447715 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
PPFIA4-204ENST00000447715 A0A0G2JS52 829 aa18.03■□□□□ 0.48
PPFIA4-204ENST00000447715 TPRNQ4KMQ1 711 aa18.02■□□□□ 0.48
PPFIA4-204ENST00000447715 FAM9BQ8IZU0 186 aa18.01■□□□□ 0.47
PPFIA4-204ENST00000447715 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
PPFIA4-204ENST00000447715 HNRNPUQ00839 825 aaKnown RBP eCLIP17.98■□□□□ 0.47
PPFIA4-204ENST00000447715 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
PPFIA4-204ENST00000447715 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
PPFIA4-204ENST00000447715 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
PPFIA4-204ENST00000447715 TRIM44Q96DX7 344 aaPredicted RBP17.97■□□□□ 0.47
PPFIA4-204ENST00000447715 PLEKHG5O94827 1062 aa17.96■□□□□ 0.47
PPFIA4-204ENST00000447715 CCDC136Q96JN2 1154 aa17.96■□□□□ 0.47
PPFIA4-204ENST00000447715 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
PPFIA4-204ENST00000447715 ZNF777Q9ULD5 760 aaPredicted RBP17.92■□□□□ 0.46
PPFIA4-204ENST00000447715 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.92■□□□□ 0.46
PPFIA4-204ENST00000447715 NCLP19338 710 aaKnown RBP17.92■□□□□ 0.46
PPFIA4-204ENST00000447715 STAG3Q9UJ98 1225 aa17.91■□□□□ 0.46
PPFIA4-204ENST00000447715 DNTTIP2Q5QJE6 756 aaKnown RBP17.9■□□□□ 0.46
PPFIA4-204ENST00000447715 PTMAP06454 111 aaKnown RBP17.89■□□□□ 0.45
PPFIA4-204ENST00000447715 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
PPFIA4-204ENST00000447715 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
PPFIA4-204ENST00000447715 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
PPFIA4-204ENST00000447715 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
PPFIA4-204ENST00000447715 P3H3Q8IVL6 736 aa17.84■□□□□ 0.45
PPFIA4-204ENST00000447715 RTN4Q9NQC3 1192 aaKnown RBP17.83■□□□□ 0.45
PPFIA4-204ENST00000447715 TAOK2Q9UL54 1235 aa17.83■□□□□ 0.45
PPFIA4-204ENST00000447715 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
PPFIA4-204ENST00000447715 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
PPFIA4-204ENST00000447715 NAP1L5Q96NT1 182 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms