RNA–Protein interactions for RNA: ENST00000447165.6

NREP-206, Transcript of neuronal regeneration related protein, human

APPRIS P1 TSL 1 (best) BASIC

Gene NREP, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-206	ENST00000447165	NISCH	Q9Y2I1	1504 aa		13.05	□□□□□ -0.32
NREP-206	ENST00000447165	HRC	P23327	699 aa		12.62	□□□□□ -0.39
NREP-206	ENST00000447165	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.48	□□□□□ -0.41
NREP-206	ENST00000447165	PELP1	Q8IZL8	1130 aa	Known RBP	12.43	□□□□□ -0.42
NREP-206	ENST00000447165	PCGF6	Q9BYE7	350 aa		12.27	□□□□□ -0.45
NREP-206	ENST00000447165	SCAF1	Q9H7N4	1312 aa	Known RBP	12.17	□□□□□ -0.46
NREP-206	ENST00000447165	MYO15B	Q96JP2	1530 aa		12.1	□□□□□ -0.47
NREP-206	ENST00000447165	SUPT5H	O00267	1087 aa	Known RBP	11.98	□□□□□ -0.49
NREP-206	ENST00000447165	MYT1	Q01538	1121 aa		11.95	□□□□□ -0.5
NREP-206	ENST00000447165	SHROOM4	Q9ULL8	1493 aa		11.95	□□□□□ -0.5
NREP-206	ENST00000447165	CHIC1	Q5VXU3	224 aa		11.87	□□□□□ -0.51
NREP-206	ENST00000447165	DCAF1	Q9Y4B6	1507 aa		11.75	□□□□□ -0.53
NREP-206	ENST00000447165	NEUROD1	Q13562	356 aa		11.72	□□□□□ -0.53
NREP-206	ENST00000447165	TRIM26	Q12899	539 aa	Predicted RBP	11.71	□□□□□ -0.53
NREP-206	ENST00000447165	ACIN1	Q9UKV3	1341 aa	Known RBP	11.7	□□□□□ -0.54
NREP-206	ENST00000447165	LOC105371045	A0A1W2PR82	267 aa		11.7	□□□□□ -0.54
NREP-206	ENST00000447165	GTF3C3	Q9Y5Q9	886 aa		11.66	□□□□□ -0.54
NREP-206	ENST00000447165	CCDC180	Q9P1Z9	1646 aa		11.66	□□□□□ -0.54
NREP-206	ENST00000447165	ZEB1	P37275	1124 aa	Predicted RBP	11.62	□□□□□ -0.55
NREP-206	ENST00000447165	CENPB	P07199	599 aa	Predicted RBP	11.41	□□□□□ -0.58
NREP-206	ENST00000447165	BCL11A	Q9H165	835 aa		11.38	□□□□□ -0.59
NREP-206	ENST00000447165	DIEXF	Q68CQ4	756 aa	Known RBP	11.35	□□□□□ -0.59
NREP-206	ENST00000447165	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.35	□□□□□ -0.59
NREP-206	ENST00000447165	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.29	□□□□□ -0.6
NREP-206	ENST00000447165	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.28	□□□□□ -0.6
NREP-206	ENST00000447165	YTHDC1	Q96MU7	727 aa	Known RBP	11.26	□□□□□ -0.61
NREP-206	ENST00000447165	CCER1	Q8TC90	406 aa	Predicted RBP	11.2	□□□□□ -0.62
NREP-206	ENST00000447165	ANP32E	Q9BTT0	268 aa		11.17	□□□□□ -0.62
NREP-206	ENST00000447165	TRIM41	Q8WV44	630 aa		11.15	□□□□□ -0.62
NREP-206	ENST00000447165	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.15	□□□□□ -0.62
NREP-206	ENST00000447165	EHMT2	Q96KQ7	1210 aa		11.15	□□□□□ -0.62
NREP-206	ENST00000447165	PRKCSH	P14314	528 aa	Predicted RBP	11.14	□□□□□ -0.63
NREP-206	ENST00000447165	CSRNP3	Q8WYN3	585 aa		11.13	□□□□□ -0.63
NREP-206	ENST00000447165	MIER1	Q8N108	512 aa		11.09	□□□□□ -0.63
NREP-206	ENST00000447165	TSHZ2	Q9NRE2	1034 aa		11.07	□□□□□ -0.64
NREP-206	ENST00000447165	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.04	□□□□□ -0.64
NREP-206	ENST00000447165	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.02	□□□□□ -0.65
NREP-206	ENST00000447165	DCAF8L2	P0C7V8	631 aa		10.96	□□□□□ -0.66
NREP-206	ENST00000447165	BCAN	Q96GW7	911 aa		10.79	□□□□□ -0.68
NREP-206	ENST00000447165	CLSPN	Q9HAW4	1339 aa		10.79	□□□□□ -0.68
NREP-206	ENST00000447165	MSH5	O43196	834 aa		10.75	□□□□□ -0.69
NREP-206	ENST00000447165	RBM19	Q9Y4C8	960 aa	Known RBP	10.75	□□□□□ -0.69
NREP-206	ENST00000447165	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.7	□□□□□ -0.7
NREP-206	ENST00000447165	RB1CC1	Q8TDY2	1594 aa		10.7	□□□□□ -0.7
NREP-206	ENST00000447165	ERICH6	Q7L0X2	663 aa		10.69	□□□□□ -0.7
NREP-206	ENST00000447165	APLP2	Q06481	763 aa		10.67	□□□□□ -0.7
NREP-206	ENST00000447165	KCNH8	Q96L42	1107 aa		10.67	□□□□□ -0.7
NREP-206	ENST00000447165	RSF1	Q96T23	1441 aa	Predicted RBP	10.67	□□□□□ -0.7
NREP-206	ENST00000447165	FKBP8	Q14318	412 aa		10.66	□□□□□ -0.7
NREP-206	ENST00000447165	ABCC9	O60706	1549 aa		10.65	□□□□□ -0.71
NREP-206	ENST00000447165	ITGAE	P38570	1179 aa		10.64	□□□□□ -0.71
NREP-206	ENST00000447165	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.64	□□□□□ -0.71
NREP-206	ENST00000447165	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.63	□□□□□ -0.71
NREP-206	ENST00000447165	DEK	P35659	375 aa	Known RBP	10.57	□□□□□ -0.72
NREP-206	ENST00000447165	CEP162	Q5TB80	1403 aa		10.56	□□□□□ -0.72
NREP-206	ENST00000447165	SALL2	Q9Y467	1007 aa	Predicted RBP	10.56	□□□□□ -0.72
NREP-206	ENST00000447165	CCDC136	Q96JN2	1154 aa		10.53	□□□□□ -0.72
NREP-206	ENST00000447165	FANCI	Q9NVI1	1328 aa		10.5	□□□□□ -0.73
NREP-206	ENST00000447165	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.44	□□□□□ -0.74
NREP-206	ENST00000447165	NEFL	P07196	543 aa		10.44	□□□□□ -0.74
NREP-206	ENST00000447165	TNIK	Q9UKE5	1360 aa		10.42	□□□□□ -0.74
NREP-206	ENST00000447165	TRIM52	Q96A61	297 aa		10.42	□□□□□ -0.74
NREP-206	ENST00000447165	DHX57	Q6P158	1386 aa	Known RBP	10.41	□□□□□ -0.74
NREP-206	ENST00000447165	ABCC8	Q09428	1581 aa		10.41	□□□□□ -0.74
NREP-206	ENST00000447165	NBR1	Q14596	966 aa		10.41	□□□□□ -0.74
NREP-206	ENST00000447165	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.41	□□□□□ -0.74
NREP-206	ENST00000447165	IL27	Q8NEV9	243 aa		10.4	□□□□□ -0.74
NREP-206	ENST00000447165	UBTF	P17480	764 aa	Known RBP	10.39	□□□□□ -0.75
NREP-206	ENST00000447165	CCDC88B	A6NC98	1476 aa		10.39	□□□□□ -0.75
NREP-206	ENST00000447165	SOGA1	O94964	1423 aa		10.39	□□□□□ -0.75
NREP-206	ENST00000447165	IRX6	P78412	446 aa	Predicted RBP	10.39	□□□□□ -0.75
NREP-206	ENST00000447165	RTN4	Q9NQC3	1192 aa	Known RBP	10.39	□□□□□ -0.75
NREP-206	ENST00000447165	MYT1L	Q9UL68	1186 aa		10.39	□□□□□ -0.75
NREP-206	ENST00000447165	UBE2Q2	Q8WVN8	375 aa		10.38	□□□□□ -0.75
NREP-206	ENST00000447165	PAK3	O75914	559 aa	Predicted RBP	10.36	□□□□□ -0.75
NREP-206	ENST00000447165	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.36	□□□□□ -0.75
NREP-206	ENST00000447165	DDX10	Q13206	875 aa	Known RBP	10.35	□□□□□ -0.75
NREP-206	ENST00000447165	SCRIB	Q14160	1630 aa		10.35	□□□□□ -0.75
NREP-206	ENST00000447165	RUSC2	Q8N2Y8	1516 aa		10.35	□□□□□ -0.75
NREP-206	ENST00000447165	EIF4G1	Q04637	1599 aa	Known RBP	10.34	□□□□□ -0.75
NREP-206	ENST00000447165	ERICH6B	Q5W0A0	696 aa		10.34	□□□□□ -0.75
NREP-206	ENST00000447165	CECR2	Q9BXF3	1484 aa		10.31	□□□□□ -0.76
NREP-206	ENST00000447165	NOP58	Q9Y2X3	529 aa	Known RBP	10.29	□□□□□ -0.76
NREP-206	ENST00000447165	MROH2B	Q7Z745	1585 aa		10.29	□□□□□ -0.76
NREP-206	ENST00000447165	NACAD	O15069	1562 aa		10.28	□□□□□ -0.76
NREP-206	ENST00000447165	WIZ	O95785	1651 aa		10.28	□□□□□ -0.76
NREP-206	ENST00000447165	PPP1R15A	O75807	674 aa	Predicted RBP	10.26	□□□□□ -0.77
NREP-206	ENST00000447165	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.26	□□□□□ -0.77
NREP-206	ENST00000447165	CLIP1	P30622	1438 aa		10.25	□□□□□ -0.77
NREP-206	ENST00000447165	GOLGA3	Q08378	1498 aa		10.23	□□□□□ -0.77
NREP-206	ENST00000447165	RANGAP1	P46060	587 aa	Predicted RBP	10.22	□□□□□ -0.77
NREP-206	ENST00000447165	B4GALNT3	Q6L9W6	998 aa		10.21	□□□□□ -0.77
NREP-206	ENST00000447165	VPS8	Q8N3P4	1428 aa		10.21	□□□□□ -0.77
NREP-206	ENST00000447165	CCER2	I3L3R5	266 aa		10.21	□□□□□ -0.78
NREP-206	ENST00000447165	WDR97	A6NE52	1622 aa		10.18	□□□□□ -0.78
NREP-206	ENST00000447165	ANP32C	O43423	234 aa		10.17	□□□□□ -0.78
NREP-206	ENST00000447165	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
NREP-206	ENST00000447165	PPP4R2	Q9NY27	417 aa		10.17	□□□□□ -0.78
NREP-206	ENST00000447165	RTL5	Q5HYW3	569 aa	Predicted RBP	10.17	□□□□□ -0.78
NREP-206	ENST00000447165	EEA1	Q15075	1411 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms