RNA–Protein interactions for RNA: ENST00000446946.1

ALDH1A1-204, Transcript of aldehyde dehydrogenase 1 family member A1, humanhuman

TSL 5

Gene ALDH1A1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1-204ENST00000446946 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
ALDH1A1-204ENST00000446946 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
ALDH1A1-204ENST00000446946 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
ALDH1A1-204ENST00000446946 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
ALDH1A1-204ENST00000446946 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
ALDH1A1-204ENST00000446946 FOXD1Q16676 465 aa19.07■□□□□ 0.64
ALDH1A1-204ENST00000446946 PLPPR3Q6T4P5 718 aa18.88■□□□□ 0.61
ALDH1A1-204ENST00000446946 ABCC9O60706 1549 aa18.35■□□□□ 0.53
ALDH1A1-204ENST00000446946 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
ALDH1A1-204ENST00000446946 CCDC180Q9P1Z9 1646 aa18.17■□□□□ 0.5
ALDH1A1-204ENST00000446946 ADRA2BP18089 450 aa18.16■□□□□ 0.5
ALDH1A1-204ENST00000446946 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
ALDH1A1-204ENST00000446946 MSH5O43196 834 aa17.65■□□□□ 0.42
ALDH1A1-204ENST00000446946 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
ALDH1A1-204ENST00000446946 RB1CC1Q8TDY2 1594 aa17.35■□□□□ 0.37
ALDH1A1-204ENST00000446946 NACADO15069 1562 aa17.17■□□□□ 0.34
ALDH1A1-204ENST00000446946 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
ALDH1A1-204ENST00000446946 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
ALDH1A1-204ENST00000446946 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
ALDH1A1-204ENST00000446946 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
ALDH1A1-204ENST00000446946 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
ALDH1A1-204ENST00000446946 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
ALDH1A1-204ENST00000446946 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
ALDH1A1-204ENST00000446946 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
ALDH1A1-204ENST00000446946 CC2D2AQ9P2K1 1620 aa16.6■□□□□ 0.25
ALDH1A1-204ENST00000446946 DCAF1Q9Y4B6 1507 aa16.58■□□□□ 0.24
ALDH1A1-204ENST00000446946 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
ALDH1A1-204ENST00000446946 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
ALDH1A1-204ENST00000446946 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
ALDH1A1-204ENST00000446946 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
ALDH1A1-204ENST00000446946 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
ALDH1A1-204ENST00000446946 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
ALDH1A1-204ENST00000446946 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
ALDH1A1-204ENST00000446946 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
ALDH1A1-204ENST00000446946 DNAJC5Q9H3Z4 198 aa16.11■□□□□ 0.17
ALDH1A1-204ENST00000446946 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
ALDH1A1-204ENST00000446946 KCNA4P22459 653 aa15.98■□□□□ 0.15
ALDH1A1-204ENST00000446946 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
ALDH1A1-204ENST00000446946 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
ALDH1A1-204ENST00000446946 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
ALDH1A1-204ENST00000446946 CUX2O14529 1486 aa15.86■□□□□ 0.13
ALDH1A1-204ENST00000446946 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
ALDH1A1-204ENST00000446946 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
ALDH1A1-204ENST00000446946 ATAD2BQ9ULI0 1458 aa15.79■□□□□ 0.12
ALDH1A1-204ENST00000446946 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
ALDH1A1-204ENST00000446946 NESP48681 1621 aa15.76■□□□□ 0.11
ALDH1A1-204ENST00000446946 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
ALDH1A1-204ENST00000446946 SMARCA2P51531 1590 aa15.71■□□□□ 0.11
ALDH1A1-204ENST00000446946 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
ALDH1A1-204ENST00000446946 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
ALDH1A1-204ENST00000446946 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
ALDH1A1-204ENST00000446946 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
ALDH1A1-204ENST00000446946 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
ALDH1A1-204ENST00000446946 KIF21AQ7Z4S6 1674 aa15.59■□□□□ 0.09
ALDH1A1-204ENST00000446946 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
ALDH1A1-204ENST00000446946 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
ALDH1A1-204ENST00000446946 PDS5BQ9NTI5 1447 aa15.38■□□□□ 0.05
ALDH1A1-204ENST00000446946 WIZO95785 1651 aa15.36■□□□□ 0.05
ALDH1A1-204ENST00000446946 WDR62O43379 1518 aa15.34■□□□□ 0.05
ALDH1A1-204ENST00000446946 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.04
ALDH1A1-204ENST00000446946 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
ALDH1A1-204ENST00000446946 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
ALDH1A1-204ENST00000446946 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
ALDH1A1-204ENST00000446946 FANCD2Q9BXW9 1451 aa15.19■□□□□ 0.02
ALDH1A1-204ENST00000446946 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
ALDH1A1-204ENST00000446946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
ALDH1A1-204ENST00000446946 CFTRP13569 1480 aa15.15■□□□□ 0.02
ALDH1A1-204ENST00000446946 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
ALDH1A1-204ENST00000446946 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
ALDH1A1-204ENST00000446946 PRDM2Q13029 1718 aa15.1■□□□□ 0.01
ALDH1A1-204ENST00000446946 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
ALDH1A1-204ENST00000446946 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
ALDH1A1-204ENST00000446946 SLC4A2P04920 1241 aa15.05■□□□□ -0
ALDH1A1-204ENST00000446946 OSCARQ8IYS5 282 aa15.04■□□□□ -0
ALDH1A1-204ENST00000446946 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
ALDH1A1-204ENST00000446946 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
ALDH1A1-204ENST00000446946 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
ALDH1A1-204ENST00000446946 ZNF608Q9ULD9 1512 aaPredicted RBP14.99□□□□□ -0.01
ALDH1A1-204ENST00000446946 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
ALDH1A1-204ENST00000446946 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
ALDH1A1-204ENST00000446946 CCDC88BA6NC98 1476 aa14.91□□□□□ -0.02
ALDH1A1-204ENST00000446946 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
ALDH1A1-204ENST00000446946 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
ALDH1A1-204ENST00000446946 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
ALDH1A1-204ENST00000446946 TOPBP1Q92547 1522 aa14.9□□□□□ -0.02
ALDH1A1-204ENST00000446946 CHD1O14646 1710 aa14.88□□□□□ -0.03
ALDH1A1-204ENST00000446946 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
ALDH1A1-204ENST00000446946 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
ALDH1A1-204ENST00000446946 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
ALDH1A1-204ENST00000446946 AQRO60306 1485 aaKnown RBP eCLIP14.78□□□□□ -0.04
ALDH1A1-204ENST00000446946 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
ALDH1A1-204ENST00000446946 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
ALDH1A1-204ENST00000446946 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
ALDH1A1-204ENST00000446946 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
ALDH1A1-204ENST00000446946 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
ALDH1A1-204ENST00000446946 ZBTB22O15209 634 aa14.7□□□□□ -0.06
ALDH1A1-204ENST00000446946 RAD54L2Q9Y4B4 1467 aa14.69□□□□□ -0.06
ALDH1A1-204ENST00000446946 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
ALDH1A1-204ENST00000446946 CLASP1Q7Z460 1538 aa14.66□□□□□ -0.06
ALDH1A1-204ENST00000446946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms