RNA–Protein interactions for RNA: ENST00000446923.6

ZEB1-205, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZEB1, Length 6,267 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-205ENST00000446923 NISCHQ9Y2I1 1504 aa10.99□□□□□ -0.65
ZEB1-205ENST00000446923 ABCC9O60706 1549 aa9.88□□□□□ -0.83
ZEB1-205ENST00000446923 CCDC180Q9P1Z9 1646 aa9.86□□□□□ -0.83
ZEB1-205ENST00000446923 DCAF8L2P0C7V8 631 aa9.81□□□□□ -0.84
ZEB1-205ENST00000446923 RB1CC1Q8TDY2 1594 aa9.58□□□□□ -0.88
ZEB1-205ENST00000446923 NACADO15069 1562 aa9.48□□□□□ -0.89
ZEB1-205ENST00000446923 MYO15BQ96JP2 1530 aa9.3□□□□□ -0.92
ZEB1-205ENST00000446923 SHROOM4Q9ULL8 1493 aa9.28□□□□□ -0.92
ZEB1-205ENST00000446923 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
ZEB1-205ENST00000446923 DCAF1Q9Y4B6 1507 aa9.16□□□□□ -0.94
ZEB1-205ENST00000446923 ZCCHC6Q5VYS8 1495 aaKnown RBP9.06□□□□□ -0.96
ZEB1-205ENST00000446923 SCRIBQ14160 1630 aa9.01□□□□□ -0.97
ZEB1-205ENST00000446923 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
ZEB1-205ENST00000446923 ERCC6Q03468 1493 aa8.88□□□□□ -0.99
ZEB1-205ENST00000446923 DNAJC5BQ9UF47 199 aa8.85□□□□□ -0.99
ZEB1-205ENST00000446923 EIF4G1Q04637 1599 aaKnown RBP8.81□□□□□ -1
ZEB1-205ENST00000446923 SMARCA2P51531 1590 aa8.79□□□□□ -1
ZEB1-205ENST00000446923 CC2D2AQ9P2K1 1620 aa8.77□□□□□ -1.01
ZEB1-205ENST00000446923 FAM9AQ8IZU1 332 aaPredicted RBP8.75□□□□□ -1.01
ZEB1-205ENST00000446923 PDS5BQ9NTI5 1447 aa8.74□□□□□ -1.01
ZEB1-205ENST00000446923 BICRAQ9NZM4 1560 aa8.74□□□□□ -1.01
ZEB1-205ENST00000446923 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
ZEB1-205ENST00000446923 BAZ1AQ9NRL2 1556 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-205ENST00000446923 CUX2O14529 1486 aa8.69□□□□□ -1.02
ZEB1-205ENST00000446923 NCAPD3P42695 1498 aa8.68□□□□□ -1.02
ZEB1-205ENST00000446923 UNC13AQ9UPW8 1703 aa8.61□□□□□ -1.03
ZEB1-205ENST00000446923 HMGXB3Q12766 1538 aa8.6□□□□□ -1.03
ZEB1-205ENST00000446923 ATAD2BQ9ULI0 1458 aa8.59□□□□□ -1.03
ZEB1-205ENST00000446923 DNAJC5Q9H3Z4 198 aa8.57□□□□□ -1.04
ZEB1-205ENST00000446923 CADPSQ9ULU8 1353 aa8.53□□□□□ -1.04
ZEB1-205ENST00000446923 LAMC3Q9Y6N6 1575 aa8.51□□□□□ -1.05
ZEB1-205ENST00000446923 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
ZEB1-205ENST00000446923 OSCARQ8IYS5 282 aa8.5□□□□□ -1.05
ZEB1-205ENST00000446923 ABCC8Q09428 1581 aa8.5□□□□□ -1.05
ZEB1-205ENST00000446923 CEP164Q9UPV0 1460 aa8.49□□□□□ -1.05
ZEB1-205ENST00000446923 MRC2Q9UBG0 1479 aa8.46□□□□□ -1.05
ZEB1-205ENST00000446923 TRIM41Q8WV44 630 aa8.43□□□□□ -1.06
ZEB1-205ENST00000446923 NPM1P06748 294 aaKnown RBP eCLIP8.42□□□□□ -1.06
ZEB1-205ENST00000446923 FBLN2P98095 1184 aa8.42□□□□□ -1.06
ZEB1-205ENST00000446923 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
ZEB1-205ENST00000446923 FANCD2Q9BXW9 1451 aa8.37□□□□□ -1.07
ZEB1-205ENST00000446923 PEG3Q9GZU2 1588 aa8.37□□□□□ -1.07
ZEB1-205ENST00000446923 TRHP20396 242 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-205ENST00000446923 SUPT5HO00267 1087 aaKnown RBP8.34□□□□□ -1.07
ZEB1-205ENST00000446923 IFT140Q96RY7 1462 aa8.34□□□□□ -1.07
ZEB1-205ENST00000446923 TOP2AP11388 1531 aaKnown RBP8.32□□□□□ -1.08
ZEB1-205ENST00000446923 AEBP2Q6ZN18 517 aaPredicted RBP8.32□□□□□ -1.08
ZEB1-205ENST00000446923 MROH2BQ7Z745 1585 aa8.31□□□□□ -1.08
ZEB1-205ENST00000446923 RSF1Q96T23 1441 aaPredicted RBP8.29□□□□□ -1.08
ZEB1-205ENST00000446923 CFTRP13569 1480 aa8.28□□□□□ -1.08
ZEB1-205ENST00000446923 NESP48681 1621 aa8.27□□□□□ -1.09
ZEB1-205ENST00000446923 WDR62O43379 1518 aa8.22□□□□□ -1.09
ZEB1-205ENST00000446923 SOGA1O94964 1423 aa8.21□□□□□ -1.1
ZEB1-205ENST00000446923 WRNQ14191 1432 aaPredicted RBP eCLIP8.18□□□□□ -1.1
ZEB1-205ENST00000446923 CYB5RLQ6IPT4 315 aa8.18□□□□□ -1.1
ZEB1-205ENST00000446923 DNMBPQ6XZF7 1577 aa8.15□□□□□ -1.1
ZEB1-205ENST00000446923 GRIN2BQ13224 1484 aa8.15□□□□□ -1.1
ZEB1-205ENST00000446923 CCDC88BA6NC98 1476 aa8.15□□□□□ -1.11
ZEB1-205ENST00000446923 WDR97A6NE52 1622 aa8.14□□□□□ -1.11
ZEB1-205ENST00000446923 WIZO95785 1651 aa8.14□□□□□ -1.11
ZEB1-205ENST00000446923 THOC2Q8NI27 1593 aaKnown RBP8.14□□□□□ -1.11
ZEB1-205ENST00000446923 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
ZEB1-205ENST00000446923 MAGI1Q96QZ7 1491 aaPredicted RBP8.12□□□□□ -1.11
ZEB1-205ENST00000446923 TOPBP1Q92547 1522 aa8.12□□□□□ -1.11
ZEB1-205ENST00000446923 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
ZEB1-205ENST00000446923 KIF21AQ7Z4S6 1674 aa8.08□□□□□ -1.12
ZEB1-205ENST00000446923 TDRD9Q8NDG6 1382 aaKnown RBP8.08□□□□□ -1.12
ZEB1-205ENST00000446923 KIF27Q86VH2 1401 aa8.07□□□□□ -1.12
ZEB1-205ENST00000446923 GAPVD1Q14C86 1478 aa8.07□□□□□ -1.12
ZEB1-205ENST00000446923 URB2Q14146 1524 aaKnown RBP8.06□□□□□ -1.12
ZEB1-205ENST00000446923 SYNJ2O15056 1496 aa8.05□□□□□ -1.12
ZEB1-205ENST00000446923 FHAD1B1AJZ9 1412 aa8.04□□□□□ -1.12
ZEB1-205ENST00000446923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.04□□□□□ -1.12
ZEB1-205ENST00000446923 HNRNPUL2Q1KMD3 747 aaKnown RBP8.04□□□□□ -1.12
ZEB1-205ENST00000446923 FGD5Q6ZNL6 1462 aa8.03□□□□□ -1.12
ZEB1-205ENST00000446923 CDK11AQ9UQ88 783 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-205ENST00000446923 AQRO60306 1485 aaKnown RBP eCLIP8.01□□□□□ -1.13
ZEB1-205ENST00000446923 POLA1P09884 1462 aaPredicted RBP8.01□□□□□ -1.13
ZEB1-205ENST00000446923 SNAPC4Q5SXM2 1469 aa8□□□□□ -1.13
ZEB1-205ENST00000446923 SLC24A1O60721 1099 aa8□□□□□ -1.13
ZEB1-205ENST00000446923 TTBK1Q5TCY1 1321 aaPredicted RBP7.99□□□□□ -1.13
ZEB1-205ENST00000446923 PRDM2Q13029 1718 aa7.99□□□□□ -1.13
ZEB1-205ENST00000446923 JPH4Q96JJ6 628 aa7.98□□□□□ -1.13
ZEB1-205ENST00000446923 ESF1Q9H501 851 aaKnown RBP7.98□□□□□ -1.13
ZEB1-205ENST00000446923 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
ZEB1-205ENST00000446923 ARHGEF11O15085 1522 aa7.96□□□□□ -1.13
ZEB1-205ENST00000446923 GOLGA3Q08378 1498 aa7.95□□□□□ -1.14
ZEB1-205ENST00000446923 ABCA10Q8WWZ4 1543 aa7.95□□□□□ -1.14
ZEB1-205ENST00000446923 FAM69CQ0P6D2 419 aa7.94□□□□□ -1.14
ZEB1-205ENST00000446923 PTPRGP23470 1445 aa7.94□□□□□ -1.14
ZEB1-205ENST00000446923 EIF4G3O43432 1585 aaKnown RBP7.94□□□□□ -1.14
ZEB1-205ENST00000446923 RAD54L2Q9Y4B4 1467 aa7.93□□□□□ -1.14
ZEB1-205ENST00000446923 ZNF608Q9ULD9 1512 aaPredicted RBP7.93□□□□□ -1.14
ZEB1-205ENST00000446923 APLP2Q06481 763 aa7.92□□□□□ -1.14
ZEB1-205ENST00000446923 CARMIL1Q5VZK9 1371 aa7.91□□□□□ -1.14
ZEB1-205ENST00000446923 ERICH3Q5RHP9 1530 aa7.91□□□□□ -1.14
ZEB1-205ENST00000446923 EEA1Q15075 1411 aa7.91□□□□□ -1.14
ZEB1-205ENST00000446923 GRIN2AQ12879 1464 aa7.91□□□□□ -1.14
ZEB1-205ENST00000446923 PRG4Q92954 1404 aaPredicted RBP7.9□□□□□ -1.14
ZEB1-205ENST00000446923 TNIKQ9UKE5 1360 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms