RNA–Protein interactions for RNA: ENST00000445537.6

PTPRO-204, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 4,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-204ENST00000445537 NISCHQ9Y2I1 1504 aa10.85□□□□□ -0.67
PTPRO-204ENST00000445537 DCAF8L2P0C7V8 631 aa10.3□□□□□ -0.76
PTPRO-204ENST00000445537 AEBP2Q6ZN18 517 aaPredicted RBP9.95□□□□□ -0.82
PTPRO-204ENST00000445537 ABCC9O60706 1549 aa9.75□□□□□ -0.85
PTPRO-204ENST00000445537 CCDC180Q9P1Z9 1646 aa9.37□□□□□ -0.91
PTPRO-204ENST00000445537 PABPN1Q86U42 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
PTPRO-204ENST00000445537 SHROOM4Q9ULL8 1493 aa9.32□□□□□ -0.92
PTPRO-204ENST00000445537 RB1CC1Q8TDY2 1594 aa9.18□□□□□ -0.94
PTPRO-204ENST00000445537 CHIC1Q5VXU3 224 aa9.15□□□□□ -0.94
PTPRO-204ENST00000445537 NACADO15069 1562 aa9.08□□□□□ -0.96
PTPRO-204ENST00000445537 SUPT5HO00267 1087 aaKnown RBP9.07□□□□□ -0.96
PTPRO-204ENST00000445537 SCRIBQ14160 1630 aa8.96□□□□□ -0.97
PTPRO-204ENST00000445537 ZCCHC6Q5VYS8 1495 aaKnown RBP8.94□□□□□ -0.98
PTPRO-204ENST00000445537 FAM9AQ8IZU1 332 aaPredicted RBP8.8□□□□□ -1
PTPRO-204ENST00000445537 MYO15BQ96JP2 1530 aa8.78□□□□□ -1
PTPRO-204ENST00000445537 DCAF1Q9Y4B6 1507 aa8.77□□□□□ -1
PTPRO-204ENST00000445537 CECR2Q9BXF3 1484 aa8.72□□□□□ -1.01
PTPRO-204ENST00000445537 ERCC6Q03468 1493 aa8.69□□□□□ -1.02
PTPRO-204ENST00000445537 DNAJC5BQ9UF47 199 aa8.66□□□□□ -1.02
PTPRO-204ENST00000445537 FBLN2P98095 1184 aa8.64□□□□□ -1.03
PTPRO-204ENST00000445537 BAZ1BQ9UIG0 1483 aaKnown RBP8.6□□□□□ -1.03
PTPRO-204ENST00000445537 BAZ1AQ9NRL2 1556 aaPredicted RBP8.53□□□□□ -1.04
PTPRO-204ENST00000445537 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
PTPRO-204ENST00000445537 EHMT2Q96KQ7 1210 aa8.53□□□□□ -1.04
PTPRO-204ENST00000445537 EIF4G1Q04637 1599 aaKnown RBP8.51□□□□□ -1.05
PTPRO-204ENST00000445537 SMARCA2P51531 1590 aa8.51□□□□□ -1.05
PTPRO-204ENST00000445537 TTBK1Q5TCY1 1321 aaPredicted RBP8.51□□□□□ -1.05
PTPRO-204ENST00000445537 PDS5BQ9NTI5 1447 aa8.5□□□□□ -1.05
PTPRO-204ENST00000445537 CC2D2AQ9P2K1 1620 aa8.47□□□□□ -1.05
PTPRO-204ENST00000445537 RANGAP1P46060 587 aaPredicted RBP8.47□□□□□ -1.05
PTPRO-204ENST00000445537 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
PTPRO-204ENST00000445537 CHMP7Q8WUX9 453 aaPredicted RBP8.43□□□□□ -1.06
PTPRO-204ENST00000445537 ATAD2BQ9ULI0 1458 aa8.42□□□□□ -1.06
PTPRO-204ENST00000445537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.41□□□□□ -1.06
PTPRO-204ENST00000445537 HNRNPUL2Q1KMD3 747 aaKnown RBP8.41□□□□□ -1.06
PTPRO-204ENST00000445537 BICRAQ9NZM4 1560 aa8.41□□□□□ -1.06
PTPRO-204ENST00000445537 NPM1P06748 294 aaKnown RBP eCLIP8.4□□□□□ -1.06
PTPRO-204ENST00000445537 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
PTPRO-204ENST00000445537 APLP2Q06481 763 aa8.39□□□□□ -1.07
PTPRO-204ENST00000445537 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
PTPRO-204ENST00000445537 RSF1Q96T23 1441 aaPredicted RBP8.38□□□□□ -1.07
PTPRO-204ENST00000445537 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
PTPRO-204ENST00000445537 MROH2BQ7Z745 1585 aa8.34□□□□□ -1.07
PTPRO-204ENST00000445537 TRHP20396 242 aaPredicted RBP8.34□□□□□ -1.07
PTPRO-204ENST00000445537 SMARCA4P51532 1647 aa8.33□□□□□ -1.08
PTPRO-204ENST00000445537 MYT1LQ9UL68 1186 aa8.33□□□□□ -1.08
PTPRO-204ENST00000445537 OSCARQ8IYS5 282 aa8.31□□□□□ -1.08
PTPRO-204ENST00000445537 PHF23Q9BUL5 403 aaPredicted RBP8.31□□□□□ -1.08
PTPRO-204ENST00000445537 CEP164Q9UPV0 1460 aa8.3□□□□□ -1.08
PTPRO-204ENST00000445537 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
PTPRO-204ENST00000445537 FANCD2Q9BXW9 1451 aa8.25□□□□□ -1.09
PTPRO-204ENST00000445537 HMGXB3Q12766 1538 aa8.23□□□□□ -1.09
PTPRO-204ENST00000445537 NESP48681 1621 aa8.21□□□□□ -1.09
PTPRO-204ENST00000445537 WIZO95785 1651 aa8.2□□□□□ -1.1
PTPRO-204ENST00000445537 CCDC88BA6NC98 1476 aa8.19□□□□□ -1.1
PTPRO-204ENST00000445537 CYB5RLQ6IPT4 315 aa8.19□□□□□ -1.1
PTPRO-204ENST00000445537 ABCC8Q09428 1581 aa8.19□□□□□ -1.1
PTPRO-204ENST00000445537 TOP2AP11388 1531 aaKnown RBP8.19□□□□□ -1.1
PTPRO-204ENST00000445537 SOGA1O94964 1423 aa8.19□□□□□ -1.1
PTPRO-204ENST00000445537 WRNQ14191 1432 aaPredicted RBP eCLIP8.18□□□□□ -1.1
PTPRO-204ENST00000445537 TDRD9Q8NDG6 1382 aaKnown RBP8.18□□□□□ -1.1
PTPRO-204ENST00000445537 MRC2Q9UBG0 1479 aa8.17□□□□□ -1.1
PTPRO-204ENST00000445537 LAMC3Q9Y6N6 1575 aa8.14□□□□□ -1.11
PTPRO-204ENST00000445537 P3H3Q8IVL6 736 aa8.13□□□□□ -1.11
PTPRO-204ENST00000445537 ARID3CA6NKF2 412 aa8.13□□□□□ -1.11
PTPRO-204ENST00000445537 CSRNP3Q8WYN3 585 aa8.12□□□□□ -1.11
PTPRO-204ENST00000445537 CDK11AQ9UQ88 783 aaPredicted RBP8.12□□□□□ -1.11
PTPRO-204ENST00000445537 CUX2O14529 1486 aa8.12□□□□□ -1.11
PTPRO-204ENST00000445537 KIF27Q86VH2 1401 aa8.11□□□□□ -1.11
PTPRO-204ENST00000445537 CFTRP13569 1480 aa8.1□□□□□ -1.11
PTPRO-204ENST00000445537 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
PTPRO-204ENST00000445537 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
PTPRO-204ENST00000445537 KCNH8Q96L42 1107 aa8.06□□□□□ -1.12
PTPRO-204ENST00000445537 SENP3Q9H4L4 574 aaPredicted RBP8.05□□□□□ -1.12
PTPRO-204ENST00000445537 DNAJC5Q9H3Z4 198 aa8.05□□□□□ -1.12
PTPRO-204ENST00000445537 AQRO60306 1485 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPRO-204ENST00000445537 CARMIL2Q6F5E8 1435 aa8.03□□□□□ -1.12
PTPRO-204ENST00000445537 JPH4Q96JJ6 628 aa8.03□□□□□ -1.12
PTPRO-204ENST00000445537 PLPPR3Q6T4P5 718 aa8.01□□□□□ -1.13
PTPRO-204ENST00000445537 PEG3Q9GZU2 1588 aa8.01□□□□□ -1.13
PTPRO-204ENST00000445537 CARMIL1Q5VZK9 1371 aa8.01□□□□□ -1.13
PTPRO-204ENST00000445537 PLEKHD1A6NEE1 506 aa8□□□□□ -1.13
PTPRO-204ENST00000445537 GAPVD1Q14C86 1478 aa8□□□□□ -1.13
PTPRO-204ENST00000445537 FGD5Q6ZNL6 1462 aa7.99□□□□□ -1.13
PTPRO-204ENST00000445537 ARID4BQ4LE39 1312 aaPredicted RBP7.99□□□□□ -1.13
PTPRO-204ENST00000445537 RAD54L2Q9Y4B4 1467 aa7.99□□□□□ -1.13
PTPRO-204ENST00000445537 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
PTPRO-204ENST00000445537 GRIN2BQ13224 1484 aa7.98□□□□□ -1.13
PTPRO-204ENST00000445537 ZNF777Q9ULD5 760 aaPredicted RBP7.98□□□□□ -1.13
PTPRO-204ENST00000445537 FAM69CQ0P6D2 419 aa7.94□□□□□ -1.14
PTPRO-204ENST00000445537 POLA1P09884 1462 aaPredicted RBP7.93□□□□□ -1.14
PTPRO-204ENST00000445537 DNMBPQ6XZF7 1577 aa7.93□□□□□ -1.14
PTPRO-204ENST00000445537 EEA1Q15075 1411 aa7.92□□□□□ -1.14
PTPRO-204ENST00000445537 PTPRGP23470 1445 aa7.92□□□□□ -1.14
PTPRO-204ENST00000445537 URB2Q14146 1524 aaKnown RBP7.91□□□□□ -1.14
PTPRO-204ENST00000445537 FHAD1B1AJZ9 1412 aa7.9□□□□□ -1.14
PTPRO-204ENST00000445537 ITGAEP38570 1179 aa7.9□□□□□ -1.14
PTPRO-204ENST00000445537 SNAPC4Q5SXM2 1469 aa7.9□□□□□ -1.14
PTPRO-204ENST00000445537 LOC105371045A0A1W2PR82 267 aa7.88□□□□□ -1.15
PTPRO-204ENST00000445537 ZNF608Q9ULD9 1512 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms