RNA–Protein interactions for RNA: ENST00000445072.1

LINC01035-201, Transcript of long intergenic non-protein coding RNA 1035, humanhuman

TSL 3 BASIC

Gene LINC01035, Length 784 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01035-201ENST00000445072 AEBP2Q6ZN18 517 aaPredicted RBP27.8■■■□□ 2.04
LINC01035-201ENST00000445072 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
LINC01035-201ENST00000445072 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
LINC01035-201ENST00000445072 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
LINC01035-201ENST00000445072 POTEDQ86YR6 584 aa22.89■■□□□ 1.25
LINC01035-201ENST00000445072 FOXD1Q16676 465 aa22.45■■□□□ 1.18
LINC01035-201ENST00000445072 MSH5O43196 834 aa21.56■■□□□ 1.04
LINC01035-201ENST00000445072 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
LINC01035-201ENST00000445072 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
LINC01035-201ENST00000445072 ADRA2BP18089 450 aa19.99■□□□□ 0.79
LINC01035-201ENST00000445072 PLPPR3Q6T4P5 718 aa19.82■□□□□ 0.76
LINC01035-201ENST00000445072 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
LINC01035-201ENST00000445072 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
LINC01035-201ENST00000445072 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
LINC01035-201ENST00000445072 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
LINC01035-201ENST00000445072 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
LINC01035-201ENST00000445072 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
LINC01035-201ENST00000445072 C1QBPQ07021 282 aaKnown RBP17.95■□□□□ 0.46
LINC01035-201ENST00000445072 POTEHQ6S545 545 aa17.76■□□□□ 0.43
LINC01035-201ENST00000445072 HOXD11P31277 338 aaPredicted RBP17.69■□□□□ 0.42
LINC01035-201ENST00000445072 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
LINC01035-201ENST00000445072 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
LINC01035-201ENST00000445072 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
LINC01035-201ENST00000445072 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
LINC01035-201ENST00000445072 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
LINC01035-201ENST00000445072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC01035-201ENST00000445072 DSG3P32926 999 aa16.68■□□□□ 0.26
LINC01035-201ENST00000445072 CAPN15O75808 1086 aa16.58■□□□□ 0.24
LINC01035-201ENST00000445072 ABCC9O60706 1549 aa16.5■□□□□ 0.23
LINC01035-201ENST00000445072 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
LINC01035-201ENST00000445072 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
LINC01035-201ENST00000445072 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
LINC01035-201ENST00000445072 SP7Q8TDD2 431 aaPredicted RBP16.11■□□□□ 0.17
LINC01035-201ENST00000445072 CHRDL2Q6WN34 429 aa16.09■□□□□ 0.17
LINC01035-201ENST00000445072 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
LINC01035-201ENST00000445072 ABCB7O75027 752 aa16.05■□□□□ 0.16
LINC01035-201ENST00000445072 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
LINC01035-201ENST00000445072 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
LINC01035-201ENST00000445072 APLP2Q06481 763 aa15.96■□□□□ 0.15
LINC01035-201ENST00000445072 NPM3O75607 178 aaKnown RBP15.92■□□□□ 0.14
LINC01035-201ENST00000445072 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
LINC01035-201ENST00000445072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
LINC01035-201ENST00000445072 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
LINC01035-201ENST00000445072 DNAJC5Q9H3Z4 198 aa15.58■□□□□ 0.08
LINC01035-201ENST00000445072 HAX1O00165 279 aa15.54■□□□□ 0.08
LINC01035-201ENST00000445072 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
LINC01035-201ENST00000445072 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
LINC01035-201ENST00000445072 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
LINC01035-201ENST00000445072 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
LINC01035-201ENST00000445072 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.05
LINC01035-201ENST00000445072 POLA2Q14181 598 aa15.31■□□□□ 0.04
LINC01035-201ENST00000445072 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
LINC01035-201ENST00000445072 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
LINC01035-201ENST00000445072 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC01035-201ENST00000445072 PLSCR2Q9NRY7 297 aa15.15■□□□□ 0.02
LINC01035-201ENST00000445072 EVX2Q03828 476 aa15.11■□□□□ 0.01
LINC01035-201ENST00000445072 LHX8Q68G74 356 aa15.11■□□□□ 0.01
LINC01035-201ENST00000445072 PITPNM1O00562 1244 aa15.05■□□□□ -0
LINC01035-201ENST00000445072 NACADO15069 1562 aa15.01□□□□□ -0.01
LINC01035-201ENST00000445072 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
LINC01035-201ENST00000445072 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
LINC01035-201ENST00000445072 CECR2Q9BXF3 1484 aa14.97□□□□□ -0.01
LINC01035-201ENST00000445072 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
LINC01035-201ENST00000445072 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
LINC01035-201ENST00000445072 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
LINC01035-201ENST00000445072 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
LINC01035-201ENST00000445072 GABBR2O75899 941 aa14.78□□□□□ -0.04
LINC01035-201ENST00000445072 C19orf67A6NJJ6 358 aa14.71□□□□□ -0.05
LINC01035-201ENST00000445072 PRKAR2AP13861 404 aaKnown RBP14.69□□□□□ -0.06
LINC01035-201ENST00000445072 SHROOM4Q9ULL8 1493 aa14.66□□□□□ -0.06
LINC01035-201ENST00000445072 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
LINC01035-201ENST00000445072 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
LINC01035-201ENST00000445072 CUX2O14529 1486 aa14.62□□□□□ -0.07
LINC01035-201ENST00000445072 KCNA4P22459 653 aa14.59□□□□□ -0.07
LINC01035-201ENST00000445072 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
LINC01035-201ENST00000445072 TRIM41Q8WV44 630 aa14.5□□□□□ -0.09
LINC01035-201ENST00000445072 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
LINC01035-201ENST00000445072 ATF5Q9Y2D1 282 aaPredicted RBP14.45□□□□□ -0.1
LINC01035-201ENST00000445072 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
LINC01035-201ENST00000445072 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
LINC01035-201ENST00000445072 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
LINC01035-201ENST00000445072 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
LINC01035-201ENST00000445072 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
LINC01035-201ENST00000445072 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
LINC01035-201ENST00000445072 POTEMA6NI47 508 aa14.29□□□□□ -0.12
LINC01035-201ENST00000445072 CLCN6P51797 869 aa14.27□□□□□ -0.13
LINC01035-201ENST00000445072 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
LINC01035-201ENST00000445072 DCBLD2Q96PD2 775 aa14.24□□□□□ -0.13
LINC01035-201ENST00000445072 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
LINC01035-201ENST00000445072 POTEGQ6S5H5 508 aa14.2□□□□□ -0.14
LINC01035-201ENST00000445072 PCDH10Q9P2E7 1040 aa14.18□□□□□ -0.14
LINC01035-201ENST00000445072 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
LINC01035-201ENST00000445072 FBLN2P98095 1184 aa14.14□□□□□ -0.15
LINC01035-201ENST00000445072 OTUD5Q96G74 571 aa14.12□□□□□ -0.15
LINC01035-201ENST00000445072 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
LINC01035-201ENST00000445072 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
LINC01035-201ENST00000445072 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
LINC01035-201ENST00000445072 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
LINC01035-201ENST00000445072 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
LINC01035-201ENST00000445072 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms