RNA–Protein interactions for RNA: ENST00000444158.1

AC006372.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC006372.3, Length 4,049 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006372.3-201ENST00000444158 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
AC006372.3-201ENST00000444158 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
AC006372.3-201ENST00000444158 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
AC006372.3-201ENST00000444158 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
AC006372.3-201ENST00000444158 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
AC006372.3-201ENST00000444158 HRCP23327 699 aa18.69■□□□□ 0.58
AC006372.3-201ENST00000444158 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
AC006372.3-201ENST00000444158 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
AC006372.3-201ENST00000444158 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
AC006372.3-201ENST00000444158 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
AC006372.3-201ENST00000444158 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
AC006372.3-201ENST00000444158 ABCC9O60706 1549 aa18.17■□□□□ 0.5
AC006372.3-201ENST00000444158 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
AC006372.3-201ENST00000444158 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
AC006372.3-201ENST00000444158 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
AC006372.3-201ENST00000444158 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.47
AC006372.3-201ENST00000444158 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
AC006372.3-201ENST00000444158 ZCCHC6Q5VYS8 1495 aaKnown RBP17.92■□□□□ 0.46
AC006372.3-201ENST00000444158 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.44
AC006372.3-201ENST00000444158 MYT1Q01538 1121 aa17.76■□□□□ 0.43
AC006372.3-201ENST00000444158 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
AC006372.3-201ENST00000444158 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
AC006372.3-201ENST00000444158 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
AC006372.3-201ENST00000444158 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
AC006372.3-201ENST00000444158 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.41
AC006372.3-201ENST00000444158 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
AC006372.3-201ENST00000444158 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
AC006372.3-201ENST00000444158 GTF3C3Q9Y5Q9 886 aa17.46■□□□□ 0.39
AC006372.3-201ENST00000444158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
AC006372.3-201ENST00000444158 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
AC006372.3-201ENST00000444158 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
AC006372.3-201ENST00000444158 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
AC006372.3-201ENST00000444158 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
AC006372.3-201ENST00000444158 APLP2Q06481 763 aa17.04■□□□□ 0.32
AC006372.3-201ENST00000444158 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
AC006372.3-201ENST00000444158 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
AC006372.3-201ENST00000444158 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
AC006372.3-201ENST00000444158 ZNF316A6NFI3 1004 aaPredicted RBP16.93■□□□□ 0.3
AC006372.3-201ENST00000444158 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
AC006372.3-201ENST00000444158 NACADO15069 1562 aa16.87■□□□□ 0.29
AC006372.3-201ENST00000444158 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
AC006372.3-201ENST00000444158 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
AC006372.3-201ENST00000444158 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
AC006372.3-201ENST00000444158 NEFLP07196 543 aa16.74■□□□□ 0.27
AC006372.3-201ENST00000444158 MIER1Q8N108 512 aa16.72■□□□□ 0.27
AC006372.3-201ENST00000444158 BCANQ96GW7 911 aa16.7■□□□□ 0.26
AC006372.3-201ENST00000444158 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
AC006372.3-201ENST00000444158 ITGAEP38570 1179 aa16.55■□□□□ 0.24
AC006372.3-201ENST00000444158 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
AC006372.3-201ENST00000444158 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
AC006372.3-201ENST00000444158 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
AC006372.3-201ENST00000444158 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
AC006372.3-201ENST00000444158 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
AC006372.3-201ENST00000444158 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
AC006372.3-201ENST00000444158 FKBP8Q14318 412 aa16.38■□□□□ 0.21
AC006372.3-201ENST00000444158 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
AC006372.3-201ENST00000444158 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
AC006372.3-201ENST00000444158 MROH2BQ7Z745 1585 aa16.33■□□□□ 0.21
AC006372.3-201ENST00000444158 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.21
AC006372.3-201ENST00000444158 SOGA1O94964 1423 aa16.31■□□□□ 0.2
AC006372.3-201ENST00000444158 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
AC006372.3-201ENST00000444158 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
AC006372.3-201ENST00000444158 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
AC006372.3-201ENST00000444158 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
AC006372.3-201ENST00000444158 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
AC006372.3-201ENST00000444158 WIZO95785 1651 aa16.24■□□□□ 0.19
AC006372.3-201ENST00000444158 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
AC006372.3-201ENST00000444158 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
AC006372.3-201ENST00000444158 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
AC006372.3-201ENST00000444158 TRIM52Q96A61 297 aa16.17■□□□□ 0.18
AC006372.3-201ENST00000444158 ANP32CO43423 234 aa16.16■□□□□ 0.18
AC006372.3-201ENST00000444158 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
AC006372.3-201ENST00000444158 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
AC006372.3-201ENST00000444158 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.18
AC006372.3-201ENST00000444158 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
AC006372.3-201ENST00000444158 CLIP1P30622 1438 aa16.1■□□□□ 0.17
AC006372.3-201ENST00000444158 CNGB1Q14028 1251 aaPredicted RBP16.07■□□□□ 0.16
AC006372.3-201ENST00000444158 RTL5Q5HYW3 569 aaPredicted RBP16.07■□□□□ 0.16
AC006372.3-201ENST00000444158 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
AC006372.3-201ENST00000444158 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
AC006372.3-201ENST00000444158 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
AC006372.3-201ENST00000444158 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
AC006372.3-201ENST00000444158 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
AC006372.3-201ENST00000444158 KCNH8Q96L42 1107 aa16.02■□□□□ 0.15
AC006372.3-201ENST00000444158 TOP2AP11388 1531 aaKnown RBP16■□□□□ 0.15
AC006372.3-201ENST00000444158 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
AC006372.3-201ENST00000444158 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
AC006372.3-201ENST00000444158 HNRNPUQ00839 825 aaKnown RBP eCLIP15.98■□□□□ 0.15
AC006372.3-201ENST00000444158 P3H3Q8IVL6 736 aa15.97■□□□□ 0.15
AC006372.3-201ENST00000444158 NBR1Q14596 966 aa15.96■□□□□ 0.15
AC006372.3-201ENST00000444158 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
AC006372.3-201ENST00000444158 POLR3GLQ9BT43 218 aa15.94■□□□□ 0.14
AC006372.3-201ENST00000444158 EEA1Q15075 1411 aa15.9■□□□□ 0.14
AC006372.3-201ENST00000444158 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
AC006372.3-201ENST00000444158 SIN3AQ96ST3 1273 aa15.87■□□□□ 0.13
AC006372.3-201ENST00000444158 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
AC006372.3-201ENST00000444158 MYT1LQ9UL68 1186 aa15.85■□□□□ 0.13
AC006372.3-201ENST00000444158 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
AC006372.3-201ENST00000444158 FBLN2P98095 1184 aa15.84■□□□□ 0.13
AC006372.3-201ENST00000444158 VPS8Q8N3P4 1428 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms