RNA–Protein interactions for RNA: ENST00000443560.1

NUCB1-205, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-205ENST00000443560 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
NUCB1-205ENST00000443560 ABCC9O60706 1549 aa34.41■■■■□ 3.1
NUCB1-205ENST00000443560 CCDC180Q9P1Z9 1646 aa34.33■■■■□ 3.09
NUCB1-205ENST00000443560 RB1CC1Q8TDY2 1594 aa32.72■■■□□ 2.83
NUCB1-205ENST00000443560 NACADO15069 1562 aa32.45■■■□□ 2.78
NUCB1-205ENST00000443560 DNAJC5BQ9UF47 199 aa32.31■■■□□ 2.76
NUCB1-205ENST00000443560 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
NUCB1-205ENST00000443560 UNC13AQ9UPW8 1703 aa32.03■■■□□ 2.72
NUCB1-205ENST00000443560 PABPN1Q86U42 306 aaKnown RBP eCLIP31.98■■■□□ 2.71
NUCB1-205ENST00000443560 MYO15BQ96JP2 1530 aa31.93■■■□□ 2.7
NUCB1-205ENST00000443560 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
NUCB1-205ENST00000443560 ZCCHC6Q5VYS8 1495 aaKnown RBP31.57■■■□□ 2.64
NUCB1-205ENST00000443560 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
NUCB1-205ENST00000443560 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
NUCB1-205ENST00000443560 SCRIBQ14160 1630 aa31.26■■■□□ 2.59
NUCB1-205ENST00000443560 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
NUCB1-205ENST00000443560 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.56
NUCB1-205ENST00000443560 EIF4G1Q04637 1599 aaKnown RBP30.99■■■□□ 2.55
NUCB1-205ENST00000443560 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
NUCB1-205ENST00000443560 ATAD2BQ9ULI0 1458 aa29.82■■■□□ 2.36
NUCB1-205ENST00000443560 DNAJC5Q9H3Z4 198 aa29.8■■■□□ 2.36
NUCB1-205ENST00000443560 SMARCA4P51532 1647 aa29.79■■■□□ 2.36
NUCB1-205ENST00000443560 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
NUCB1-205ENST00000443560 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
NUCB1-205ENST00000443560 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
NUCB1-205ENST00000443560 CUX2O14529 1486 aa29.71■■■□□ 2.35
NUCB1-205ENST00000443560 BAZ1AQ9NRL2 1556 aaPredicted RBP29.62■■■□□ 2.33
NUCB1-205ENST00000443560 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
NUCB1-205ENST00000443560 NESP48681 1621 aa29.5■■■□□ 2.31
NUCB1-205ENST00000443560 PEG3Q9GZU2 1588 aa29.48■■■□□ 2.31
NUCB1-205ENST00000443560 MROH2BQ7Z745 1585 aa29.36■■■□□ 2.29
NUCB1-205ENST00000443560 LAMC3Q9Y6N6 1575 aa29.31■■■□□ 2.28
NUCB1-205ENST00000443560 THOC2Q8NI27 1593 aaKnown RBP29.27■■■□□ 2.28
NUCB1-205ENST00000443560 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.26
NUCB1-205ENST00000443560 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
NUCB1-205ENST00000443560 WIZO95785 1651 aa29.04■■■□□ 2.24
NUCB1-205ENST00000443560 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
NUCB1-205ENST00000443560 MRC2Q9UBG0 1479 aa28.9■■■□□ 2.22
NUCB1-205ENST00000443560 WDR62O43379 1518 aa28.82■■■□□ 2.2
NUCB1-205ENST00000443560 CEP164Q9UPV0 1460 aa28.77■■■□□ 2.2
NUCB1-205ENST00000443560 FANCD2Q9BXW9 1451 aa28.71■■■□□ 2.19
NUCB1-205ENST00000443560 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
NUCB1-205ENST00000443560 TOP2AP11388 1531 aaKnown RBP28.66■■■□□ 2.18
NUCB1-205ENST00000443560 CFTRP13569 1480 aa28.65■■■□□ 2.18
NUCB1-205ENST00000443560 TRIM41Q8WV44 630 aa28.49■■■□□ 2.15
NUCB1-205ENST00000443560 PRDM2Q13029 1718 aa28.48■■■□□ 2.15
NUCB1-205ENST00000443560 URB2Q14146 1524 aaKnown RBP28.47■■■□□ 2.15
NUCB1-205ENST00000443560 OSCARQ8IYS5 282 aa28.31■■■□□ 2.12
NUCB1-205ENST00000443560 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
NUCB1-205ENST00000443560 IFT140Q96RY7 1462 aa28.18■■■□□ 2.1
NUCB1-205ENST00000443560 TOPBP1Q92547 1522 aa28.14■■■□□ 2.1
NUCB1-205ENST00000443560 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
NUCB1-205ENST00000443560 ABCC8Q09428 1581 aa28.09■■■□□ 2.09
NUCB1-205ENST00000443560 DNMBPQ6XZF7 1577 aa28.06■■■□□ 2.08
NUCB1-205ENST00000443560 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
NUCB1-205ENST00000443560 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
NUCB1-205ENST00000443560 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
NUCB1-205ENST00000443560 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
NUCB1-205ENST00000443560 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
NUCB1-205ENST00000443560 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
NUCB1-205ENST00000443560 CHD1O14646 1710 aa27.87■■■□□ 2.05
NUCB1-205ENST00000443560 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.058e-7■■■■■ 35.1
NUCB1-205ENST00000443560 POLA1P09884 1462 aaPredicted RBP27.84■■■□□ 2.05
NUCB1-205ENST00000443560 FBLN2P98095 1184 aa27.74■■■□□ 2.03
NUCB1-205ENST00000443560 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
NUCB1-205ENST00000443560 SOGA1O94964 1423 aa27.71■■■□□ 2.03
NUCB1-205ENST00000443560 CYB5RLQ6IPT4 315 aa27.67■■■□□ 2.02
NUCB1-205ENST00000443560 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
NUCB1-205ENST00000443560 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
NUCB1-205ENST00000443560 WDR97A6NE52 1622 aa27.64■■■□□ 2.02
NUCB1-205ENST00000443560 CUX1P39880 1505 aa27.61■■■□□ 2.01
NUCB1-205ENST00000443560 SNAPC4Q5SXM2 1469 aa27.59■■■□□ 2.01
NUCB1-205ENST00000443560 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
NUCB1-205ENST00000443560 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
NUCB1-205ENST00000443560 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
NUCB1-205ENST00000443560 GRIN2BQ13224 1484 aa27.5■■□□□ 1.99
NUCB1-205ENST00000443560 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
NUCB1-205ENST00000443560 CLASP1Q7Z460 1538 aa27.48■■□□□ 1.99
NUCB1-205ENST00000443560 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
NUCB1-205ENST00000443560 TRHP20396 242 aaPredicted RBP27.44■■□□□ 1.98
NUCB1-205ENST00000443560 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
NUCB1-205ENST00000443560 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
NUCB1-205ENST00000443560 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
NUCB1-205ENST00000443560 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.97
NUCB1-205ENST00000443560 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
NUCB1-205ENST00000443560 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.94
NUCB1-205ENST00000443560 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
NUCB1-205ENST00000443560 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
NUCB1-205ENST00000443560 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
NUCB1-205ENST00000443560 ADAMTS12P58397 1594 aa27.14■■□□□ 1.93
NUCB1-205ENST00000443560 CEP170Q5SW79 1584 aa27.05■■□□□ 1.92
NUCB1-205ENST00000443560 NUP160Q12769 1436 aa27.04■■□□□ 1.92
NUCB1-205ENST00000443560 ERCC6L2Q5T890 1561 aa27.03■■□□□ 1.92
NUCB1-205ENST00000443560 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
NUCB1-205ENST00000443560 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
NUCB1-205ENST00000443560 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
NUCB1-205ENST00000443560 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
NUCB1-205ENST00000443560 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
NUCB1-205ENST00000443560 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
NUCB1-205ENST00000443560 JPH4Q96JJ6 628 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms