RNA–Protein interactions for RNA: ENST00000443560.1

NUCB1-205, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-205ENST00000443560 AATFQ9NY61 560 aaKnown RBP eCLIP18.59■□□□□ 0.574e-8■■■■■ 78.2
NUCB1-205ENST00000443560 FTOQ9C0B1 505 aaKnown RBP eCLIP17.75■□□□□ 0.431e-11■■■■■ 54.4
NUCB1-205ENST00000443560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.43□□□□□ -0.13e-7■■■■■ 53.8
NUCB1-205ENST00000443560 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.929e-7■■■■■ 51.9
NUCB1-205ENST00000443560 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■■■■■ 36.5
NUCB1-205ENST00000443560 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.058e-7■■■■■ 35.1
NUCB1-205ENST00000443560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.8■□□□□ 0.288e-7■■■■■ 34.5
NUCB1-205ENST00000443560 DKC1O60832 514 aaKnown RBP eCLIP16.95■□□□□ 0.34e-7■■■■■ 32.2
NUCB1-205ENST00000443560 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.17□□□□□ -0.149e-6■■■■□ 26.1
NUCB1-205ENST00000443560 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.363e-8■■■■□ 26
NUCB1-205ENST00000443560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.82■□□□□ 0.283e-7■■■■□ 25
NUCB1-205ENST00000443560 RPS3P23396 243 aaKnown RBP eCLIP14.4□□□□□ -0.12e-7■■■■□ 21.8
NUCB1-205ENST00000443560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.42□□□□□ -0.261e-5■■■■□ 21.5
NUCB1-205ENST00000443560 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.616e-6■■■■□ 21.3
NUCB1-205ENST00000443560 EWSR1Q01844 656 aaKnown RBP eCLIP11.27□□□□□ -0.619e-7■■■■□ 21.1
NUCB1-205ENST00000443560 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.17e-8■■■□□ 16.1
NUCB1-205ENST00000443560 PUM1Q14671 1186 aaKnown RBP eCLIP16.61■□□□□ 0.252e-7■■■□□ 14.8
NUCB1-205ENST00000443560 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.37□□□□□ -0.111e-8■■□□□ 12
NUCB1-205ENST00000443560 DDX3XO00571 662 aaKnown RBP eCLIP15□□□□□ -0.014e-7■■□□□ 11.6
NUCB1-205ENST00000443560 YBX3P16989 372 aaKnown RBP eCLIP20.99■□□□□ 0.958e-10■□□□□ 10.6
NUCB1-205ENST00000443560 PCBP1Q15365 356 aaKnown RBP eCLIP16.87■□□□□ 0.294e-6■□□□□ 10.4
NUCB1-205ENST00000443560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.24■■□□□ 1.632e-10■□□□□ 9.9
NUCB1-205ENST00000443560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.72■■□□□ 1.395e-8■□□□□ 9.7
NUCB1-205ENST00000443560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.75□□□□□ -0.053e-14■□□□□ 9.2
Retrieved 24 of 24 RNA–protein pairs in 18.8 ms