RNA–Protein interactions for RNA: ENST00000441237.1

PMS2P9-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 9, humanhuman

BASIC

Gene PMS2P9, Length 515 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P9-201ENST00000441237 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
PMS2P9-201ENST00000441237 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
PMS2P9-201ENST00000441237 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
PMS2P9-201ENST00000441237 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
PMS2P9-201ENST00000441237 FOXD1Q16676 465 aa16.84■□□□□ 0.29
PMS2P9-201ENST00000441237 PLPPR3Q6T4P5 718 aa15.89■□□□□ 0.13
PMS2P9-201ENST00000441237 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
PMS2P9-201ENST00000441237 MSH5O43196 834 aa15.71■□□□□ 0.11
PMS2P9-201ENST00000441237 NISCHQ9Y2I1 1504 aa15.68■□□□□ 0.1
PMS2P9-201ENST00000441237 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
PMS2P9-201ENST00000441237 ADRA2BP18089 450 aa15.63■□□□□ 0.09
PMS2P9-201ENST00000441237 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
PMS2P9-201ENST00000441237 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
PMS2P9-201ENST00000441237 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
PMS2P9-201ENST00000441237 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
PMS2P9-201ENST00000441237 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
PMS2P9-201ENST00000441237 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
PMS2P9-201ENST00000441237 ABCC9O60706 1549 aa13.9□□□□□ -0.19
PMS2P9-201ENST00000441237 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
PMS2P9-201ENST00000441237 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
PMS2P9-201ENST00000441237 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
PMS2P9-201ENST00000441237 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
PMS2P9-201ENST00000441237 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
PMS2P9-201ENST00000441237 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
PMS2P9-201ENST00000441237 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
PMS2P9-201ENST00000441237 NACADO15069 1562 aa13.35□□□□□ -0.27
PMS2P9-201ENST00000441237 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
PMS2P9-201ENST00000441237 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
PMS2P9-201ENST00000441237 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
PMS2P9-201ENST00000441237 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
PMS2P9-201ENST00000441237 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
PMS2P9-201ENST00000441237 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
PMS2P9-201ENST00000441237 ZCCHC6Q5VYS8 1495 aaKnown RBP13.05□□□□□ -0.32
PMS2P9-201ENST00000441237 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
PMS2P9-201ENST00000441237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
PMS2P9-201ENST00000441237 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
PMS2P9-201ENST00000441237 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
PMS2P9-201ENST00000441237 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
PMS2P9-201ENST00000441237 KCNA4P22459 653 aa12.9□□□□□ -0.34
PMS2P9-201ENST00000441237 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
PMS2P9-201ENST00000441237 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
PMS2P9-201ENST00000441237 SCRIBQ14160 1630 aa12.77□□□□□ -0.36
PMS2P9-201ENST00000441237 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
PMS2P9-201ENST00000441237 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
PMS2P9-201ENST00000441237 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
PMS2P9-201ENST00000441237 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
PMS2P9-201ENST00000441237 CAPN15O75808 1086 aa12.58□□□□□ -0.4
PMS2P9-201ENST00000441237 DSG3P32926 999 aa12.58□□□□□ -0.4
PMS2P9-201ENST00000441237 CECR2Q9BXF3 1484 aa12.57□□□□□ -0.4
PMS2P9-201ENST00000441237 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
PMS2P9-201ENST00000441237 APLP2Q06481 763 aa12.33□□□□□ -0.44
PMS2P9-201ENST00000441237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
PMS2P9-201ENST00000441237 ABCB7O75027 752 aa12.32□□□□□ -0.44
PMS2P9-201ENST00000441237 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
PMS2P9-201ENST00000441237 ZNF219Q9P2Y4 722 aaPredicted RBP12.32□□□□□ -0.44
PMS2P9-201ENST00000441237 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.45
PMS2P9-201ENST00000441237 NCAPD3P42695 1498 aa12.27□□□□□ -0.45
PMS2P9-201ENST00000441237 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
PMS2P9-201ENST00000441237 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
PMS2P9-201ENST00000441237 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
PMS2P9-201ENST00000441237 BAZ1AQ9NRL2 1556 aaPredicted RBP12.24□□□□□ -0.45
PMS2P9-201ENST00000441237 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
PMS2P9-201ENST00000441237 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
PMS2P9-201ENST00000441237 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
PMS2P9-201ENST00000441237 POTEHQ6S545 545 aa12.14□□□□□ -0.47
PMS2P9-201ENST00000441237 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
PMS2P9-201ENST00000441237 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
PMS2P9-201ENST00000441237 CUX2O14529 1486 aa12.11□□□□□ -0.47
PMS2P9-201ENST00000441237 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
PMS2P9-201ENST00000441237 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
PMS2P9-201ENST00000441237 POLA2Q14181 598 aa12.03□□□□□ -0.48
PMS2P9-201ENST00000441237 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
PMS2P9-201ENST00000441237 FOXD4L1Q9NU39 408 aa12.02□□□□□ -0.49
PMS2P9-201ENST00000441237 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
PMS2P9-201ENST00000441237 THOC2Q8NI27 1593 aaKnown RBP11.94□□□□□ -0.5
PMS2P9-201ENST00000441237 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
PMS2P9-201ENST00000441237 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
PMS2P9-201ENST00000441237 NESP48681 1621 aa11.93□□□□□ -0.5
PMS2P9-201ENST00000441237 ZBTB22O15209 634 aa11.9□□□□□ -0.5
PMS2P9-201ENST00000441237 WIZO95785 1651 aa11.88□□□□□ -0.51
PMS2P9-201ENST00000441237 KIF21AQ7Z4S6 1674 aa11.87□□□□□ -0.51
PMS2P9-201ENST00000441237 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
PMS2P9-201ENST00000441237 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
PMS2P9-201ENST00000441237 TOP2AP11388 1531 aaKnown RBP11.84□□□□□ -0.51
PMS2P9-201ENST00000441237 MRC2Q9UBG0 1479 aa11.82□□□□□ -0.52
PMS2P9-201ENST00000441237 WDR62O43379 1518 aa11.81□□□□□ -0.52
PMS2P9-201ENST00000441237 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
PMS2P9-201ENST00000441237 CEP164Q9UPV0 1460 aa11.78□□□□□ -0.52
PMS2P9-201ENST00000441237 CFTRP13569 1480 aa11.77□□□□□ -0.52
PMS2P9-201ENST00000441237 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
PMS2P9-201ENST00000441237 CHRDL2Q6WN34 429 aa11.74□□□□□ -0.53
PMS2P9-201ENST00000441237 FANCD2Q9BXW9 1451 aa11.74□□□□□ -0.53
PMS2P9-201ENST00000441237 ZBTB12Q9Y330 459 aaPredicted RBP11.72□□□□□ -0.53
PMS2P9-201ENST00000441237 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
PMS2P9-201ENST00000441237 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
PMS2P9-201ENST00000441237 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
PMS2P9-201ENST00000441237 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
PMS2P9-201ENST00000441237 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
PMS2P9-201ENST00000441237 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
PMS2P9-201ENST00000441237 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms