RNA–Protein interactions for RNA: ENST00000439268.6

RANBP3-203, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 3,186 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-203ENST00000439268 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
RANBP3-203ENST00000439268 SHROOM4Q9ULL8 1493 aa19.77■□□□□ 0.76
RANBP3-203ENST00000439268 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
RANBP3-203ENST00000439268 HRCP23327 699 aa19.13■□□□□ 0.65
RANBP3-203ENST00000439268 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
RANBP3-203ENST00000439268 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
RANBP3-203ENST00000439268 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
RANBP3-203ENST00000439268 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
RANBP3-203ENST00000439268 PCGF6Q9BYE7 350 aa18.98■□□□□ 0.63
RANBP3-203ENST00000439268 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
RANBP3-203ENST00000439268 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
RANBP3-203ENST00000439268 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
RANBP3-203ENST00000439268 MYT1Q01538 1121 aa18.71■□□□□ 0.59
RANBP3-203ENST00000439268 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
RANBP3-203ENST00000439268 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
RANBP3-203ENST00000439268 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
RANBP3-203ENST00000439268 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
RANBP3-203ENST00000439268 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
RANBP3-203ENST00000439268 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
RANBP3-203ENST00000439268 ABCC9O60706 1549 aa18.09■□□□□ 0.49
RANBP3-203ENST00000439268 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
RANBP3-203ENST00000439268 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
RANBP3-203ENST00000439268 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
RANBP3-203ENST00000439268 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
RANBP3-203ENST00000439268 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
RANBP3-203ENST00000439268 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
RANBP3-203ENST00000439268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
RANBP3-203ENST00000439268 PRKCSHP14314 528 aaPredicted RBP17.68■□□□□ 0.42
RANBP3-203ENST00000439268 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
RANBP3-203ENST00000439268 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
RANBP3-203ENST00000439268 ACIN1Q9UKV3 1341 aaKnown RBP17.59■□□□□ 0.41
RANBP3-203ENST00000439268 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.41
RANBP3-203ENST00000439268 NEUROD1Q13562 356 aa17.58■□□□□ 0.4
RANBP3-203ENST00000439268 WIZO95785 1651 aa17.53■□□□□ 0.4
RANBP3-203ENST00000439268 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
RANBP3-203ENST00000439268 GTF3C3Q9Y5Q9 886 aa17.46■□□□□ 0.39
RANBP3-203ENST00000439268 CENPBP07199 599 aaPredicted RBP17.43■□□□□ 0.38
RANBP3-203ENST00000439268 NACADO15069 1562 aa17.38■□□□□ 0.37
RANBP3-203ENST00000439268 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
RANBP3-203ENST00000439268 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.36
RANBP3-203ENST00000439268 ABCC8Q09428 1581 aa17.33■□□□□ 0.36
RANBP3-203ENST00000439268 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
RANBP3-203ENST00000439268 CEP162Q5TB80 1403 aa17.31■□□□□ 0.36
RANBP3-203ENST00000439268 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
RANBP3-203ENST00000439268 ERICH6Q7L0X2 663 aa17.28■□□□□ 0.36
RANBP3-203ENST00000439268 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.365e-6■■■■■ 29.2
RANBP3-203ENST00000439268 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
RANBP3-203ENST00000439268 SOGA1O94964 1423 aa17.24■□□□□ 0.35
RANBP3-203ENST00000439268 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
RANBP3-203ENST00000439268 ZNF316A6NFI3 1004 aaPredicted RBP17.23■□□□□ 0.35
RANBP3-203ENST00000439268 TNIKQ9UKE5 1360 aa17.19■□□□□ 0.34
RANBP3-203ENST00000439268 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
RANBP3-203ENST00000439268 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
RANBP3-203ENST00000439268 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
RANBP3-203ENST00000439268 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
RANBP3-203ENST00000439268 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
RANBP3-203ENST00000439268 APLP2Q06481 763 aa17.1■□□□□ 0.33
RANBP3-203ENST00000439268 MIER1Q8N108 512 aa17.09■□□□□ 0.33
RANBP3-203ENST00000439268 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
RANBP3-203ENST00000439268 EEA1Q15075 1411 aa17.05■□□□□ 0.32
RANBP3-203ENST00000439268 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
RANBP3-203ENST00000439268 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
RANBP3-203ENST00000439268 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-203ENST00000439268 CLIP1P30622 1438 aa16.91■□□□□ 0.3
RANBP3-203ENST00000439268 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
RANBP3-203ENST00000439268 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
RANBP3-203ENST00000439268 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
RANBP3-203ENST00000439268 SYNJ1O43426 1573 aa16.83■□□□□ 0.28
RANBP3-203ENST00000439268 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.288e-7■■□□□ 12.1
RANBP3-203ENST00000439268 KIF21BO75037 1637 aa16.82■□□□□ 0.28
RANBP3-203ENST00000439268 RAPGEF2Q9Y4G8 1499 aa16.77■□□□□ 0.28
RANBP3-203ENST00000439268 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
RANBP3-203ENST00000439268 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
RANBP3-203ENST00000439268 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
RANBP3-203ENST00000439268 CLSPNQ9HAW4 1339 aa16.63■□□□□ 0.25
RANBP3-203ENST00000439268 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
RANBP3-203ENST00000439268 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
RANBP3-203ENST00000439268 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
RANBP3-203ENST00000439268 ITGAEP38570 1179 aa16.57■□□□□ 0.24
RANBP3-203ENST00000439268 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
RANBP3-203ENST00000439268 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
RANBP3-203ENST00000439268 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
RANBP3-203ENST00000439268 TSHZ2Q9NRE2 1034 aa16.51■□□□□ 0.23
RANBP3-203ENST00000439268 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
RANBP3-203ENST00000439268 ERICH3Q5RHP9 1530 aa16.47■□□□□ 0.23
RANBP3-203ENST00000439268 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
RANBP3-203ENST00000439268 RRBP1Q9P2E9 1410 aaKnown RBP16.47■□□□□ 0.23
RANBP3-203ENST00000439268 BCANQ96GW7 911 aa16.46■□□□□ 0.23
RANBP3-203ENST00000439268 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
RANBP3-203ENST00000439268 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
RANBP3-203ENST00000439268 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
RANBP3-203ENST00000439268 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
RANBP3-203ENST00000439268 CUX2O14529 1486 aa16.38■□□□□ 0.21
RANBP3-203ENST00000439268 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
RANBP3-203ENST00000439268 FKBP8Q14318 412 aa16.36■□□□□ 0.21
RANBP3-203ENST00000439268 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
RANBP3-203ENST00000439268 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
RANBP3-203ENST00000439268 MAPKBP1O60336 1514 aa16.33■□□□□ 0.2
RANBP3-203ENST00000439268 CUX1P39880 1505 aa16.33■□□□□ 0.2
RANBP3-203ENST00000439268 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms