RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
VPS8-207ENST00000436792 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
VPS8-207ENST00000436792 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
VPS8-207ENST00000436792 APLP2Q06481 763 aa14.69□□□□□ -0.06
VPS8-207ENST00000436792 SUPT5HO00267 1087 aaKnown RBP14.57□□□□□ -0.08
VPS8-207ENST00000436792 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
VPS8-207ENST00000436792 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
VPS8-207ENST00000436792 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
VPS8-207ENST00000436792 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
VPS8-207ENST00000436792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.16
VPS8-207ENST00000436792 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.16
VPS8-207ENST00000436792 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
VPS8-207ENST00000436792 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
VPS8-207ENST00000436792 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
VPS8-207ENST00000436792 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
VPS8-207ENST00000436792 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
VPS8-207ENST00000436792 ABCC9O60706 1549 aa13.74□□□□□ -0.21
VPS8-207ENST00000436792 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
VPS8-207ENST00000436792 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
VPS8-207ENST00000436792 FBLN2P98095 1184 aa13.66□□□□□ -0.22
VPS8-207ENST00000436792 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
VPS8-207ENST00000436792 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
VPS8-207ENST00000436792 BCANQ96GW7 911 aa13.48□□□□□ -0.25
VPS8-207ENST00000436792 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
VPS8-207ENST00000436792 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
VPS8-207ENST00000436792 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
VPS8-207ENST00000436792 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
VPS8-207ENST00000436792 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
VPS8-207ENST00000436792 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
VPS8-207ENST00000436792 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
VPS8-207ENST00000436792 NEFMP07197 916 aa13.15□□□□□ -0.31
VPS8-207ENST00000436792 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
VPS8-207ENST00000436792 ITGAEP38570 1179 aa13.13□□□□□ -0.31
VPS8-207ENST00000436792 AEBP2Q6ZN18 517 aaPredicted RBP13.12□□□□□ -0.31
VPS8-207ENST00000436792 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
VPS8-207ENST00000436792 TRIM52Q96A61 297 aa13.06□□□□□ -0.32
VPS8-207ENST00000436792 NEFLP07196 543 aa13.05□□□□□ -0.32
VPS8-207ENST00000436792 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
VPS8-207ENST00000436792 SLC24A1O60721 1099 aa13.03□□□□□ -0.32
VPS8-207ENST00000436792 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
VPS8-207ENST00000436792 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
VPS8-207ENST00000436792 ERCC6Q03468 1493 aa12.98□□□□□ -0.33
VPS8-207ENST00000436792 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
VPS8-207ENST00000436792 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
VPS8-207ENST00000436792 C14orf37Q86TY3 774 aa12.96□□□□□ -0.33
VPS8-207ENST00000436792 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
VPS8-207ENST00000436792 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
VPS8-207ENST00000436792 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
VPS8-207ENST00000436792 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
VPS8-207ENST00000436792 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
VPS8-207ENST00000436792 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
VPS8-207ENST00000436792 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
VPS8-207ENST00000436792 A0A0G2JS52 829 aa12.85□□□□□ -0.35
VPS8-207ENST00000436792 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.35
VPS8-207ENST00000436792 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
VPS8-207ENST00000436792 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
VPS8-207ENST00000436792 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
VPS8-207ENST00000436792 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
VPS8-207ENST00000436792 ZNF326Q5BKZ1 582 aaKnown RBP12.77□□□□□ -0.37
VPS8-207ENST00000436792 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
VPS8-207ENST00000436792 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
VPS8-207ENST00000436792 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
VPS8-207ENST00000436792 CNGB1Q14028 1251 aaPredicted RBP12.72□□□□□ -0.37
VPS8-207ENST00000436792 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
VPS8-207ENST00000436792 MYT1Q01538 1121 aa12.71□□□□□ -0.37
VPS8-207ENST00000436792 PLEKHD1A6NEE1 506 aa12.7□□□□□ -0.38
VPS8-207ENST00000436792 FOXD1Q16676 465 aa12.7□□□□□ -0.38
VPS8-207ENST00000436792 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
VPS8-207ENST00000436792 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
VPS8-207ENST00000436792 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
VPS8-207ENST00000436792 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
VPS8-207ENST00000436792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.39
VPS8-207ENST00000436792 NPHP1O15259 732 aa12.57□□□□□ -0.4
VPS8-207ENST00000436792 CANXP27824 592 aaKnown RBP12.57□□□□□ -0.4
VPS8-207ENST00000436792 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
VPS8-207ENST00000436792 ZBTB7CA1YPR0 619 aa12.55□□□□□ -0.4
VPS8-207ENST00000436792 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
VPS8-207ENST00000436792 NEUROD1Q13562 356 aa12.49□□□□□ -0.41
VPS8-207ENST00000436792 NACADO15069 1562 aa12.49□□□□□ -0.41
VPS8-207ENST00000436792 EIF4G2P78344 907 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS8-207ENST00000436792 PDS5BQ9NTI5 1447 aa12.47□□□□□ -0.41
VPS8-207ENST00000436792 TRIM26Q12899 539 aaPredicted RBP12.45□□□□□ -0.42
VPS8-207ENST00000436792 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
VPS8-207ENST00000436792 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
VPS8-207ENST00000436792 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
VPS8-207ENST00000436792 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
VPS8-207ENST00000436792 MLECQ14165 292 aa12.42□□□□□ -0.42
VPS8-207ENST00000436792 BAZ1BQ9UIG0 1483 aaKnown RBP12.42□□□□□ -0.42
VPS8-207ENST00000436792 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
VPS8-207ENST00000436792 ARXQ96QS3 562 aa12.39□□□□□ -0.43
VPS8-207ENST00000436792 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
VPS8-207ENST00000436792 KANK1Q14678 1352 aa12.38□□□□□ -0.43
VPS8-207ENST00000436792 CCDC180Q9P1Z9 1646 aa12.37□□□□□ -0.43
VPS8-207ENST00000436792 CCDC9Q9Y3X0 531 aaKnown RBP12.37□□□□□ -0.43
VPS8-207ENST00000436792 PHF23Q9BUL5 403 aaPredicted RBP12.37□□□□□ -0.43
VPS8-207ENST00000436792 CARMIL2Q6F5E8 1435 aa12.36□□□□□ -0.43
VPS8-207ENST00000436792 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
VPS8-207ENST00000436792 EID1Q9Y6B2 187 aa12.36□□□□□ -0.43
VPS8-207ENST00000436792 POGKQ9P215 609 aa12.35□□□□□ -0.43
VPS8-207ENST00000436792 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms