RNA–Protein interactions for RNA: ENST00000435956.7

TMEM143-203, Transcript of transmembrane protein 143, humanhuman

TSL 2 BASIC

Gene TMEM143, Length 2,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-203ENST00000435956 NISCHQ9Y2I1 1504 aa33.29■■■□□ 2.92
TMEM143-203ENST00000435956 CCDC180Q9P1Z9 1646 aa28.41■■■□□ 2.14
TMEM143-203ENST00000435956 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
TMEM143-203ENST00000435956 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
TMEM143-203ENST00000435956 DCAF8L2P0C7V8 631 aa27.52■■■□□ 2
TMEM143-203ENST00000435956 SUPT5HO00267 1087 aaKnown RBP27.48■■□□□ 1.99
TMEM143-203ENST00000435956 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
TMEM143-203ENST00000435956 ABCC9O60706 1549 aa27.25■■□□□ 1.95
TMEM143-203ENST00000435956 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
TMEM143-203ENST00000435956 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
TMEM143-203ENST00000435956 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
TMEM143-203ENST00000435956 NACADO15069 1562 aa26.28■■□□□ 1.8
TMEM143-203ENST00000435956 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
TMEM143-203ENST00000435956 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
TMEM143-203ENST00000435956 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.76
TMEM143-203ENST00000435956 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
TMEM143-203ENST00000435956 LOC105371045A0A1W2PR82 267 aa25.88■■□□□ 1.73
TMEM143-203ENST00000435956 WIZO95785 1651 aa25.76■■□□□ 1.71
TMEM143-203ENST00000435956 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
TMEM143-203ENST00000435956 HRCP23327 699 aa25.65■■□□□ 1.7
TMEM143-203ENST00000435956 TRIM41Q8WV44 630 aa25.58■■□□□ 1.69
TMEM143-203ENST00000435956 PCGF6Q9BYE7 350 aa25.56■■□□□ 1.68
TMEM143-203ENST00000435956 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
TMEM143-203ENST00000435956 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
TMEM143-203ENST00000435956 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
TMEM143-203ENST00000435956 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
TMEM143-203ENST00000435956 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.66
TMEM143-203ENST00000435956 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
TMEM143-203ENST00000435956 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
TMEM143-203ENST00000435956 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
TMEM143-203ENST00000435956 SMARCA2P51531 1590 aa25.19■■□□□ 1.62
TMEM143-203ENST00000435956 EHMT2Q96KQ7 1210 aa25.18■■□□□ 1.62
TMEM143-203ENST00000435956 TRIM26Q12899 539 aaPredicted RBP25.1■■□□□ 1.61
TMEM143-203ENST00000435956 ABCC8Q09428 1581 aa25.08■■□□□ 1.61
TMEM143-203ENST00000435956 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
TMEM143-203ENST00000435956 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
TMEM143-203ENST00000435956 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
TMEM143-203ENST00000435956 ATAD2BQ9ULI0 1458 aa24.79■■□□□ 1.56
TMEM143-203ENST00000435956 SOGA1O94964 1423 aa24.79■■□□□ 1.56
TMEM143-203ENST00000435956 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
TMEM143-203ENST00000435956 BAZ1BQ9UIG0 1483 aaKnown RBP24.67■■□□□ 1.54
TMEM143-203ENST00000435956 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
TMEM143-203ENST00000435956 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
TMEM143-203ENST00000435956 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
TMEM143-203ENST00000435956 CSRNP3Q8WYN3 585 aa24.55■■□□□ 1.52
TMEM143-203ENST00000435956 EEA1Q15075 1411 aa24.54■■□□□ 1.52
TMEM143-203ENST00000435956 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
TMEM143-203ENST00000435956 ZEB1P37275 1124 aaPredicted RBP24.52■■□□□ 1.52
TMEM143-203ENST00000435956 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
TMEM143-203ENST00000435956 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.5
TMEM143-203ENST00000435956 GOLGA3Q08378 1498 aa24.39■■□□□ 1.49
TMEM143-203ENST00000435956 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
TMEM143-203ENST00000435956 HMGXB3Q12766 1538 aa24.32■■□□□ 1.48
TMEM143-203ENST00000435956 TTBK1Q5TCY1 1321 aaPredicted RBP24.31■■□□□ 1.48
TMEM143-203ENST00000435956 KIF21BO75037 1637 aa24.29■■□□□ 1.48
TMEM143-203ENST00000435956 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
TMEM143-203ENST00000435956 CEP164Q9UPV0 1460 aa24.27■■□□□ 1.48
TMEM143-203ENST00000435956 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
TMEM143-203ENST00000435956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.19■■□□□ 1.46
TMEM143-203ENST00000435956 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
TMEM143-203ENST00000435956 CUX1P39880 1505 aa24.12■■□□□ 1.45
TMEM143-203ENST00000435956 CLIP1P30622 1438 aa24.1■■□□□ 1.45
TMEM143-203ENST00000435956 CFTRP13569 1480 aa24.1■■□□□ 1.45
TMEM143-203ENST00000435956 CCER1Q8TC90 406 aaPredicted RBP24.03■■□□□ 1.44
TMEM143-203ENST00000435956 VPS8Q8N3P4 1428 aa23.98■■□□□ 1.43
TMEM143-203ENST00000435956 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
TMEM143-203ENST00000435956 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
TMEM143-203ENST00000435956 ERICH3Q5RHP9 1530 aa23.92■■□□□ 1.42
TMEM143-203ENST00000435956 PRDM2Q13029 1718 aa23.91■■□□□ 1.42
TMEM143-203ENST00000435956 KIF27Q86VH2 1401 aa23.86■■□□□ 1.41
TMEM143-203ENST00000435956 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
TMEM143-203ENST00000435956 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
TMEM143-203ENST00000435956 PELP1Q8IZL8 1130 aaKnown RBP23.78■■□□□ 1.4
TMEM143-203ENST00000435956 SCAF1Q9H7N4 1312 aaKnown RBP23.78■■□□□ 1.4
TMEM143-203ENST00000435956 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
TMEM143-203ENST00000435956 APLP2Q06481 763 aa23.71■■□□□ 1.39
TMEM143-203ENST00000435956 CUX2O14529 1486 aa23.71■■□□□ 1.39
TMEM143-203ENST00000435956 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
TMEM143-203ENST00000435956 IGF1RP08069 1367 aa23.68■■□□□ 1.38
TMEM143-203ENST00000435956 NESP48681 1621 aa23.65■■□□□ 1.38
TMEM143-203ENST00000435956 KANK4Q5T7N3 995 aaPredicted RBP23.64■■□□□ 1.37
TMEM143-203ENST00000435956 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.37
TMEM143-203ENST00000435956 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
TMEM143-203ENST00000435956 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
TMEM143-203ENST00000435956 CARMIL1Q5VZK9 1371 aa23.54■■□□□ 1.36
TMEM143-203ENST00000435956 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
TMEM143-203ENST00000435956 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
TMEM143-203ENST00000435956 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
TMEM143-203ENST00000435956 TOPBP1Q92547 1522 aa23.46■■□□□ 1.35
TMEM143-203ENST00000435956 DIEXFQ68CQ4 756 aaKnown RBP23.45■■□□□ 1.35
TMEM143-203ENST00000435956 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
TMEM143-203ENST00000435956 ERCC6Q03468 1493 aa23.44■■□□□ 1.34
TMEM143-203ENST00000435956 RRBP1Q9P2E9 1410 aaKnown RBP23.41■■□□□ 1.34
TMEM143-203ENST00000435956 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
TMEM143-203ENST00000435956 KIF21AQ7Z4S6 1674 aa23.39■■□□□ 1.33
TMEM143-203ENST00000435956 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
TMEM143-203ENST00000435956 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
TMEM143-203ENST00000435956 ZNF316A6NFI3 1004 aaPredicted RBP23.35■■□□□ 1.33
TMEM143-203ENST00000435956 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
TMEM143-203ENST00000435956 TIAM1Q13009 1591 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms