RNA–Protein interactions for RNA: ENST00000435181.1

GRAMD4P1-201, Transcript of GRAM domain containing 4 pseudogene 1, humanhuman

BASIC

Gene GRAMD4P1, Length 1,110 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4P1-201ENST00000435181 NISCHQ9Y2I1 1504 aa44.21■■■■■ 4.67
GRAMD4P1-201ENST00000435181 CCDC180Q9P1Z9 1646 aa39.14■■■■□ 3.86
GRAMD4P1-201ENST00000435181 ABCC9O60706 1549 aa38.04■■■■□ 3.68
GRAMD4P1-201ENST00000435181 DCAF8L2P0C7V8 631 aa37.03■■■■□ 3.52
GRAMD4P1-201ENST00000435181 ZCCHC6Q5VYS8 1495 aaKnown RBP36.86■■■■□ 3.49
GRAMD4P1-201ENST00000435181 NACADO15069 1562 aa36.8■■■■□ 3.48
GRAMD4P1-201ENST00000435181 RB1CC1Q8TDY2 1594 aa36.77■■■■□ 3.48
GRAMD4P1-201ENST00000435181 MYO15BQ96JP2 1530 aa36.66■■■■□ 3.46
GRAMD4P1-201ENST00000435181 DCAF1Q9Y4B6 1507 aa36.61■■■■□ 3.45
GRAMD4P1-201ENST00000435181 UNC13AQ9UPW8 1703 aa35.74■■■■□ 3.31
GRAMD4P1-201ENST00000435181 SCRIBQ14160 1630 aa35.74■■■■□ 3.31
GRAMD4P1-201ENST00000435181 PABPN1Q86U42 306 aaKnown RBP eCLIP35.66■■■■□ 3.3
GRAMD4P1-201ENST00000435181 BICRAQ9NZM4 1560 aa35.5■■■■□ 3.27
GRAMD4P1-201ENST00000435181 SHROOM4Q9ULL8 1493 aa35.3■■■■□ 3.24
GRAMD4P1-201ENST00000435181 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
GRAMD4P1-201ENST00000435181 DNAJC5BQ9UF47 199 aa34.59■■■■□ 3.13
GRAMD4P1-201ENST00000435181 CC2D2AQ9P2K1 1620 aa34.39■■■■□ 3.1
GRAMD4P1-201ENST00000435181 CECR2Q9BXF3 1484 aa34.36■■■■□ 3.09
GRAMD4P1-201ENST00000435181 BAZ1AQ9NRL2 1556 aaPredicted RBP34.29■■■■□ 3.08
GRAMD4P1-201ENST00000435181 SMARCA4P51532 1647 aa34.21■■■■□ 3.07
GRAMD4P1-201ENST00000435181 MROH2BQ7Z745 1585 aa34.04■■■■□ 3.04
GRAMD4P1-201ENST00000435181 SMARCA2P51531 1590 aa34■■■■□ 3.03
GRAMD4P1-201ENST00000435181 ATAD2BQ9ULI0 1458 aa33.99■■■■□ 3.03
GRAMD4P1-201ENST00000435181 NCAPD3P42695 1498 aa33.95■■■■□ 3.02
GRAMD4P1-201ENST00000435181 PEG3Q9GZU2 1588 aa33.86■■■■□ 3.01
GRAMD4P1-201ENST00000435181 RSF1Q96T23 1441 aaPredicted RBP33.81■■■■□ 3
GRAMD4P1-201ENST00000435181 HMGXB3Q12766 1538 aa33.77■■■■□ 3
GRAMD4P1-201ENST00000435181 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■■□ 3
GRAMD4P1-201ENST00000435181 WIZO95785 1651 aa33.68■■■□□ 2.98
GRAMD4P1-201ENST00000435181 TOP2AP11388 1531 aaKnown RBP33.38■■■□□ 2.93
GRAMD4P1-201ENST00000435181 SUPT5HO00267 1087 aaKnown RBP33.32■■■□□ 2.92
GRAMD4P1-201ENST00000435181 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
GRAMD4P1-201ENST00000435181 CADPSQ9ULU8 1353 aa33.01■■■□□ 2.88
GRAMD4P1-201ENST00000435181 LAMC3Q9Y6N6 1575 aa33■■■□□ 2.87
GRAMD4P1-201ENST00000435181 NESP48681 1621 aa32.95■■■□□ 2.87
GRAMD4P1-201ENST00000435181 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
GRAMD4P1-201ENST00000435181 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
GRAMD4P1-201ENST00000435181 CFTRP13569 1480 aa32.83■■■□□ 2.85
GRAMD4P1-201ENST00000435181 FANCD2Q9BXW9 1451 aa32.6■■■□□ 2.81
GRAMD4P1-201ENST00000435181 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
GRAMD4P1-201ENST00000435181 KIF21AQ7Z4S6 1674 aa32.54■■■□□ 2.8
GRAMD4P1-201ENST00000435181 PRDM2Q13029 1718 aa32.51■■■□□ 2.8
GRAMD4P1-201ENST00000435181 MRC2Q9UBG0 1479 aa32.42■■■□□ 2.78
GRAMD4P1-201ENST00000435181 THOC2Q8NI27 1593 aaKnown RBP32.35■■■□□ 2.77
GRAMD4P1-201ENST00000435181 CUX2O14529 1486 aa32.35■■■□□ 2.77
GRAMD4P1-201ENST00000435181 WDR62O43379 1518 aa32.24■■■□□ 2.75
GRAMD4P1-201ENST00000435181 ABCC8Q09428 1581 aa32.22■■■□□ 2.75
GRAMD4P1-201ENST00000435181 URB2Q14146 1524 aaKnown RBP32.18■■■□□ 2.74
GRAMD4P1-201ENST00000435181 TOPBP1Q92547 1522 aa32.08■■■□□ 2.73
GRAMD4P1-201ENST00000435181 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
GRAMD4P1-201ENST00000435181 CUX1P39880 1505 aa31.92■■■□□ 2.7
GRAMD4P1-201ENST00000435181 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
GRAMD4P1-201ENST00000435181 IFT140Q96RY7 1462 aa31.86■■■□□ 2.69
GRAMD4P1-201ENST00000435181 POLA1P09884 1462 aaPredicted RBP31.82■■■□□ 2.68
GRAMD4P1-201ENST00000435181 FGD5Q6ZNL6 1462 aa31.8■■■□□ 2.68
GRAMD4P1-201ENST00000435181 SOGA1O94964 1423 aa31.79■■■□□ 2.68
GRAMD4P1-201ENST00000435181 TOP2BQ02880 1626 aa31.75■■■□□ 2.67
GRAMD4P1-201ENST00000435181 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
GRAMD4P1-201ENST00000435181 SYNJ1O43426 1573 aa31.71■■■□□ 2.67
GRAMD4P1-201ENST00000435181 RAD54L2Q9Y4B4 1467 aa31.68■■■□□ 2.66
GRAMD4P1-201ENST00000435181 TARBP1Q13395 1621 aaKnown RBP31.65■■■□□ 2.66
GRAMD4P1-201ENST00000435181 ZNF608Q9ULD9 1512 aaPredicted RBP31.59■■■□□ 2.65
GRAMD4P1-201ENST00000435181 TDRD9Q8NDG6 1382 aaKnown RBP31.54■■■□□ 2.64
GRAMD4P1-201ENST00000435181 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
GRAMD4P1-201ENST00000435181 ABCA10Q8WWZ4 1543 aa31.52■■■□□ 2.64
GRAMD4P1-201ENST00000435181 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.64
GRAMD4P1-201ENST00000435181 WDR97A6NE52 1622 aa31.51■■■□□ 2.63
GRAMD4P1-201ENST00000435181 EIF4G3O43432 1585 aaKnown RBP31.47■■■□□ 2.63
GRAMD4P1-201ENST00000435181 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
GRAMD4P1-201ENST00000435181 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
GRAMD4P1-201ENST00000435181 ABCA5Q8WWZ7 1642 aa31.3■■■□□ 2.6
GRAMD4P1-201ENST00000435181 KIF27Q86VH2 1401 aa31.28■■■□□ 2.6
GRAMD4P1-201ENST00000435181 MAGI1Q96QZ7 1491 aaPredicted RBP31.23■■■□□ 2.59
GRAMD4P1-201ENST00000435181 FBLN2P98095 1184 aa31.23■■■□□ 2.59
GRAMD4P1-201ENST00000435181 CHIC1Q5VXU3 224 aa31.23■■■□□ 2.59
GRAMD4P1-201ENST00000435181 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
GRAMD4P1-201ENST00000435181 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
GRAMD4P1-201ENST00000435181 OSCARQ8IYS5 282 aa31.19■■■□□ 2.58
GRAMD4P1-201ENST00000435181 CHMP7Q8WUX9 453 aaPredicted RBP31.19■■■□□ 2.58
GRAMD4P1-201ENST00000435181 ERICH3Q5RHP9 1530 aa31.17■■■□□ 2.58
GRAMD4P1-201ENST00000435181 SYNJ2O15056 1496 aa31.1■■■□□ 2.57
GRAMD4P1-201ENST00000435181 IGF1RP08069 1367 aa31.07■■■□□ 2.56
GRAMD4P1-201ENST00000435181 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.56
GRAMD4P1-201ENST00000435181 DNAJC5Q9H3Z4 198 aa31.03■■■□□ 2.56
GRAMD4P1-201ENST00000435181 CHD1O14646 1710 aa31■■■□□ 2.55
GRAMD4P1-201ENST00000435181 ADAMTS12P58397 1594 aa30.99■■■□□ 2.55
GRAMD4P1-201ENST00000435181 RUSC2Q8N2Y8 1516 aa30.94■■■□□ 2.54
GRAMD4P1-201ENST00000435181 CUL7Q14999 1698 aa30.93■■■□□ 2.54
GRAMD4P1-201ENST00000435181 CARMIL1Q5VZK9 1371 aa30.93■■■□□ 2.54
GRAMD4P1-201ENST00000435181 EEA1Q15075 1411 aa30.91■■■□□ 2.54
GRAMD4P1-201ENST00000435181 GRIN2AQ12879 1464 aa30.91■■■□□ 2.54
GRAMD4P1-201ENST00000435181 CSRNP3Q8WYN3 585 aa30.85■■■□□ 2.53
GRAMD4P1-201ENST00000435181 FAM9AQ8IZU1 332 aaPredicted RBP30.79■■■□□ 2.52
GRAMD4P1-201ENST00000435181 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.52
GRAMD4P1-201ENST00000435181 NUP160Q12769 1436 aa30.75■■■□□ 2.51
GRAMD4P1-201ENST00000435181 CLASP1Q7Z460 1538 aa30.68■■■□□ 2.5
GRAMD4P1-201ENST00000435181 CEP170Q5SW79 1584 aa30.67■■■□□ 2.5
GRAMD4P1-201ENST00000435181 PRXQ9BXM0 1461 aa30.66■■■□□ 2.5
GRAMD4P1-201ENST00000435181 KIAA0586Q9BVV6 1533 aa30.59■■■□□ 2.49
GRAMD4P1-201ENST00000435181 JPH4Q96JJ6 628 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms