RNA–Protein interactions for RNA: ENST00000434713.6

STAG1-203, Transcript of stromal antigen 1, humanhuman

TSL 5 BASIC

Gene STAG1, Length 5,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-203ENST00000434713 NISCHQ9Y2I1 1504 aa22.25■■□□□ 1.15
STAG1-203ENST00000434713 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
STAG1-203ENST00000434713 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
STAG1-203ENST00000434713 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
STAG1-203ENST00000434713 APLP2Q06481 763 aa19.21■□□□□ 0.67
STAG1-203ENST00000434713 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
STAG1-203ENST00000434713 TRIM41Q8WV44 630 aa19.05■□□□□ 0.64
STAG1-203ENST00000434713 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
STAG1-203ENST00000434713 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.6
STAG1-203ENST00000434713 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
STAG1-203ENST00000434713 ABCC9O60706 1549 aa18.63■□□□□ 0.57
STAG1-203ENST00000434713 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
STAG1-203ENST00000434713 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
STAG1-203ENST00000434713 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
STAG1-203ENST00000434713 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
STAG1-203ENST00000434713 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
STAG1-203ENST00000434713 CCER1Q8TC90 406 aaPredicted RBP18.35■□□□□ 0.53
STAG1-203ENST00000434713 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.53
STAG1-203ENST00000434713 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
STAG1-203ENST00000434713 ATP1B4Q9UN42 357 aaPredicted RBP18.28■□□□□ 0.52
STAG1-203ENST00000434713 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.51
STAG1-203ENST00000434713 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
STAG1-203ENST00000434713 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
STAG1-203ENST00000434713 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
STAG1-203ENST00000434713 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
STAG1-203ENST00000434713 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
STAG1-203ENST00000434713 NACADO15069 1562 aa18.02■□□□□ 0.48
STAG1-203ENST00000434713 LOC105371045A0A1W2PR82 267 aa18.01■□□□□ 0.47
STAG1-203ENST00000434713 HRCP23327 699 aa17.93■□□□□ 0.46
STAG1-203ENST00000434713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
STAG1-203ENST00000434713 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
STAG1-203ENST00000434713 PPARGC1BQ86YN6 1023 aaKnown RBP17.79■□□□□ 0.44
STAG1-203ENST00000434713 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
STAG1-203ENST00000434713 NEFLP07196 543 aa17.69■□□□□ 0.42
STAG1-203ENST00000434713 ITGAEP38570 1179 aa17.66■□□□□ 0.42
STAG1-203ENST00000434713 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
STAG1-203ENST00000434713 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
STAG1-203ENST00000434713 EEA1Q15075 1411 aa17.58■□□□□ 0.4
STAG1-203ENST00000434713 MYT1LQ9UL68 1186 aa17.56■□□□□ 0.4
STAG1-203ENST00000434713 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
STAG1-203ENST00000434713 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.39
STAG1-203ENST00000434713 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
STAG1-203ENST00000434713 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
STAG1-203ENST00000434713 ERICH6Q7L0X2 663 aa17.41■□□□□ 0.38
STAG1-203ENST00000434713 YTHDC1Q96MU7 727 aaKnown RBP17.38■□□□□ 0.37
STAG1-203ENST00000434713 TRIM52Q96A61 297 aa17.36■□□□□ 0.37
STAG1-203ENST00000434713 FBLN2P98095 1184 aa17.33■□□□□ 0.36
STAG1-203ENST00000434713 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
STAG1-203ENST00000434713 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
STAG1-203ENST00000434713 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
STAG1-203ENST00000434713 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
STAG1-203ENST00000434713 POLR3GLQ9BT43 218 aa17.23■□□□□ 0.35
STAG1-203ENST00000434713 CLIP1P30622 1438 aa17.2■□□□□ 0.34
STAG1-203ENST00000434713 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
STAG1-203ENST00000434713 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
STAG1-203ENST00000434713 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
STAG1-203ENST00000434713 MYT1Q01538 1121 aa17.18■□□□□ 0.34
STAG1-203ENST00000434713 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
STAG1-203ENST00000434713 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
STAG1-203ENST00000434713 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
STAG1-203ENST00000434713 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
STAG1-203ENST00000434713 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
STAG1-203ENST00000434713 ANP32CO43423 234 aa17.11■□□□□ 0.33
STAG1-203ENST00000434713 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
STAG1-203ENST00000434713 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
STAG1-203ENST00000434713 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
STAG1-203ENST00000434713 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
STAG1-203ENST00000434713 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.32
STAG1-203ENST00000434713 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.32
STAG1-203ENST00000434713 TONSLQ96HA7 1378 aa16.98■□□□□ 0.31
STAG1-203ENST00000434713 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
STAG1-203ENST00000434713 CCDC88BA6NC98 1476 aa16.97■□□□□ 0.31
STAG1-203ENST00000434713 DAXXQ9UER7 740 aaPredicted RBP16.95■□□□□ 0.3
STAG1-203ENST00000434713 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
STAG1-203ENST00000434713 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
STAG1-203ENST00000434713 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
STAG1-203ENST00000434713 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
STAG1-203ENST00000434713 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
STAG1-203ENST00000434713 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
STAG1-203ENST00000434713 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
STAG1-203ENST00000434713 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
STAG1-203ENST00000434713 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
STAG1-203ENST00000434713 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
STAG1-203ENST00000434713 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
STAG1-203ENST00000434713 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
STAG1-203ENST00000434713 CUX2O14529 1486 aa16.81■□□□□ 0.28
STAG1-203ENST00000434713 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
STAG1-203ENST00000434713 CNGB1Q14028 1251 aaPredicted RBP16.79■□□□□ 0.28
STAG1-203ENST00000434713 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
STAG1-203ENST00000434713 WIZO95785 1651 aa16.78■□□□□ 0.28
STAG1-203ENST00000434713 NEFMP07197 916 aa16.76■□□□□ 0.27
STAG1-203ENST00000434713 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
STAG1-203ENST00000434713 SOGA1O94964 1423 aa16.73■□□□□ 0.27
STAG1-203ENST00000434713 VPS8Q8N3P4 1428 aa16.72■□□□□ 0.27
STAG1-203ENST00000434713 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
STAG1-203ENST00000434713 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
STAG1-203ENST00000434713 TIMELESSQ9UNS1 1208 aa16.66■□□□□ 0.26
STAG1-203ENST00000434713 CFDP1Q9UEE9 299 aaPredicted RBP16.65■□□□□ 0.26
STAG1-203ENST00000434713 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
STAG1-203ENST00000434713 GTF3C3Q9Y5Q9 886 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms