RNA–Protein interactions for RNA: ENST00000434408.1

TOB2-202, Transcript of transducer of ERBB2, 2, humanhuman

TSL 2

Gene TOB2, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOB2-202ENST00000434408 NISCHQ9Y2I1 1504 aa50.83■■■■■ 5.73
TOB2-202ENST00000434408 CCDC180Q9P1Z9 1646 aa45.26■■■■■ 4.84
TOB2-202ENST00000434408 ABCC9O60706 1549 aa44.66■■■■■ 4.74
TOB2-202ENST00000434408 RB1CC1Q8TDY2 1594 aa42.8■■■■■ 4.44
TOB2-202ENST00000434408 DCAF8L2P0C7V8 631 aa42.69■■■■■ 4.42
TOB2-202ENST00000434408 NACADO15069 1562 aa42.68■■■■■ 4.42
TOB2-202ENST00000434408 MYO15BQ96JP2 1530 aa42.31■■■■■ 4.36
TOB2-202ENST00000434408 ZCCHC6Q5VYS8 1495 aaKnown RBP42.25■■■■■ 4.35
TOB2-202ENST00000434408 DCAF1Q9Y4B6 1507 aa42.03■■■■■ 4.32
TOB2-202ENST00000434408 UNC13AQ9UPW8 1703 aa41.75■■■■■ 4.27
TOB2-202ENST00000434408 PABPN1Q86U42 306 aaKnown RBP eCLIP41.73■■■■■ 4.27
TOB2-202ENST00000434408 BICRAQ9NZM4 1560 aa41.5■■■■■ 4.23
TOB2-202ENST00000434408 DNAJC5BQ9UF47 199 aa41.32■■■■■ 4.21
TOB2-202ENST00000434408 SCRIBQ14160 1630 aa41.31■■■■■ 4.2
TOB2-202ENST00000434408 SHROOM4Q9ULL8 1493 aa41.03■■■■■ 4.16
TOB2-202ENST00000434408 EIF4G1Q04637 1599 aaKnown RBP40.44■■■■■ 4.06
TOB2-202ENST00000434408 CC2D2AQ9P2K1 1620 aa40.34■■■■■ 4.05
TOB2-202ENST00000434408 CECR2Q9BXF3 1484 aa40.17■■■■■ 4.02
TOB2-202ENST00000434408 SMARCA4P51532 1647 aa39.47■■■■□ 3.91
TOB2-202ENST00000434408 NCAPD3P42695 1498 aa39.41■■■■□ 3.9
TOB2-202ENST00000434408 BAZ1AQ9NRL2 1556 aaPredicted RBP39.4■■■■□ 3.9
TOB2-202ENST00000434408 ATAD2BQ9ULI0 1458 aa39.38■■■■□ 3.9
TOB2-202ENST00000434408 SMARCA2P51531 1590 aa39.3■■■■□ 3.88
TOB2-202ENST00000434408 MROH2BQ7Z745 1585 aa39.17■■■■□ 3.86
TOB2-202ENST00000434408 HMGXB3Q12766 1538 aa39.14■■■■□ 3.86
TOB2-202ENST00000434408 PEG3Q9GZU2 1588 aa39.09■■■■□ 3.85
TOB2-202ENST00000434408 BAZ1BQ9UIG0 1483 aaKnown RBP39.04■■■■□ 3.84
TOB2-202ENST00000434408 WIZO95785 1651 aa38.71■■■■□ 3.79
TOB2-202ENST00000434408 RSF1Q96T23 1441 aaPredicted RBP38.63■■■■□ 3.78
TOB2-202ENST00000434408 NESP48681 1621 aa38.55■■■■□ 3.76
TOB2-202ENST00000434408 ERCC6Q03468 1493 aa38.52■■■■□ 3.76
TOB2-202ENST00000434408 LAMC3Q9Y6N6 1575 aa38.38■■■■□ 3.73
TOB2-202ENST00000434408 TOP2AP11388 1531 aaKnown RBP38.29■■■■□ 3.72
TOB2-202ENST00000434408 CADPSQ9ULU8 1353 aa38.26■■■■□ 3.72
TOB2-202ENST00000434408 CUX2O14529 1486 aa38.2■■■■□ 3.71
TOB2-202ENST00000434408 PDS5BQ9NTI5 1447 aa38.18■■■■□ 3.7
TOB2-202ENST00000434408 KIF21AQ7Z4S6 1674 aa38.03■■■■□ 3.68
TOB2-202ENST00000434408 THOC2Q8NI27 1593 aaKnown RBP37.97■■■■□ 3.67
TOB2-202ENST00000434408 CFTRP13569 1480 aa37.95■■■■□ 3.67
TOB2-202ENST00000434408 CCDC88BA6NC98 1476 aa37.88■■■■□ 3.65
TOB2-202ENST00000434408 FANCD2Q9BXW9 1451 aa37.8■■■■□ 3.64
TOB2-202ENST00000434408 MRC2Q9UBG0 1479 aa37.78■■■■□ 3.64
TOB2-202ENST00000434408 CEP164Q9UPV0 1460 aa37.77■■■■□ 3.64
TOB2-202ENST00000434408 WDR62O43379 1518 aa37.64■■■■□ 3.62
TOB2-202ENST00000434408 PRDM2Q13029 1718 aa37.53■■■■□ 3.6
TOB2-202ENST00000434408 SUPT5HO00267 1087 aaKnown RBP37.49■■■■□ 3.59
TOB2-202ENST00000434408 DNAJC5Q9H3Z4 198 aa37.46■■■■□ 3.59
TOB2-202ENST00000434408 URB2Q14146 1524 aaKnown RBP37.44■■■■□ 3.58
TOB2-202ENST00000434408 TOPBP1Q92547 1522 aa37.15■■■■□ 3.54
TOB2-202ENST00000434408 ABCC8Q09428 1581 aa37.15■■■■□ 3.54
TOB2-202ENST00000434408 DNMBPQ6XZF7 1577 aa37.07■■■■□ 3.52
TOB2-202ENST00000434408 IFT140Q96RY7 1462 aa37.01■■■■□ 3.51
TOB2-202ENST00000434408 ZNF608Q9ULD9 1512 aaPredicted RBP36.87■■■■□ 3.49
TOB2-202ENST00000434408 POLA1P09884 1462 aaPredicted RBP36.82■■■■□ 3.49
TOB2-202ENST00000434408 CUX1P39880 1505 aa36.75■■■■□ 3.47
TOB2-202ENST00000434408 TARBP1Q13395 1621 aaKnown RBP36.75■■■■□ 3.47
TOB2-202ENST00000434408 SOGA1O94964 1423 aa36.7■■■■□ 3.47
TOB2-202ENST00000434408 FGD5Q6ZNL6 1462 aa36.69■■■■□ 3.46
TOB2-202ENST00000434408 RAD54L2Q9Y4B4 1467 aa36.69■■■■□ 3.46
TOB2-202ENST00000434408 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
TOB2-202ENST00000434408 AQRO60306 1485 aaKnown RBP eCLIP36.64■■■■□ 3.461e-6■■■□□ 18.9
TOB2-202ENST00000434408 OSCARQ8IYS5 282 aa36.64■■■■□ 3.46
TOB2-202ENST00000434408 TDRD9Q8NDG6 1382 aaKnown RBP36.54■■■■□ 3.44
TOB2-202ENST00000434408 WRNQ14191 1432 aaPredicted RBP eCLIP36.43■■■■□ 3.42
TOB2-202ENST00000434408 WDR97A6NE52 1622 aa36.42■■■■□ 3.42
TOB2-202ENST00000434408 TOP2BQ02880 1626 aa36.34■■■■□ 3.41
TOB2-202ENST00000434408 BIVM-ERCC5R4GMW8 1640 aa36.33■■■■□ 3.41
TOB2-202ENST00000434408 SYNJ1O43426 1573 aa36.32■■■■□ 3.41
TOB2-202ENST00000434408 ABCA10Q8WWZ4 1543 aa36.32■■■■□ 3.4
TOB2-202ENST00000434408 FBLN2P98095 1184 aa36.31■■■■□ 3.4
TOB2-202ENST00000434408 GRIN2BQ13224 1484 aa36.29■■■■□ 3.4
TOB2-202ENST00000434408 SNAPC4Q5SXM2 1469 aa36.26■■■■□ 3.4
TOB2-202ENST00000434408 GAPVD1Q14C86 1478 aa36.24■■■■□ 3.39
TOB2-202ENST00000434408 CHD1O14646 1710 aa36.24■■■■□ 3.39
TOB2-202ENST00000434408 MAGI1Q96QZ7 1491 aaPredicted RBP36.21■■■■□ 3.39
TOB2-202ENST00000434408 ABCA5Q8WWZ7 1642 aa36.16■■■■□ 3.38
TOB2-202ENST00000434408 CHMP7Q8WUX9 453 aaPredicted RBP36.15■■■■□ 3.38
TOB2-202ENST00000434408 PBRM1Q86U86 1689 aa36.11■■■■□ 3.37
TOB2-202ENST00000434408 TRIM41Q8WV44 630 aa36.1■■■■□ 3.37
TOB2-202ENST00000434408 SYNJ2O15056 1496 aa36.08■■■■□ 3.37
TOB2-202ENST00000434408 RIMBP3CA6NJZ7 1639 aa36■■■■□ 3.35
TOB2-202ENST00000434408 RIMBP3BA6NNM3 1639 aa36■■■■□ 3.35
TOB2-202ENST00000434408 RIMBP3Q9UFD9 1639 aa36■■■■□ 3.35
TOB2-202ENST00000434408 ARHGEF11O15085 1522 aa35.98■■■■□ 3.35
TOB2-202ENST00000434408 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
TOB2-202ENST00000434408 ERICH3Q5RHP9 1530 aa35.87■■■■□ 3.33
TOB2-202ENST00000434408 ADAMTS12P58397 1594 aa35.84■■■■□ 3.33
TOB2-202ENST00000434408 FHAD1B1AJZ9 1412 aa35.83■■■■□ 3.33
TOB2-202ENST00000434408 GRIN2AQ12879 1464 aa35.8■■■■□ 3.32
TOB2-202ENST00000434408 CYB5RLQ6IPT4 315 aa35.73■■■■□ 3.31
TOB2-202ENST00000434408 KIF27Q86VH2 1401 aa35.7■■■■□ 3.31
TOB2-202ENST00000434408 ARAP1Q96P48 1450 aa35.67■■■■□ 3.3
TOB2-202ENST00000434408 NUP160Q12769 1436 aa35.66■■■■□ 3.3
TOB2-202ENST00000434408 IGF1RP08069 1367 aa35.63■■■■□ 3.29
TOB2-202ENST00000434408 CEP170Q5SW79 1584 aa35.62■■■■□ 3.29
TOB2-202ENST00000434408 CUL7Q14999 1698 aa35.46■■■■□ 3.27
TOB2-202ENST00000434408 SHROOM2Q13796 1616 aa35.39■■■■□ 3.26
TOB2-202ENST00000434408 CARMIL1Q5VZK9 1371 aa35.39■■■■□ 3.26
TOB2-202ENST00000434408 ERCC6L2Q5T890 1561 aa35.37■■■■□ 3.25
TOB2-202ENST00000434408 JPH4Q96JJ6 628 aa35.36■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms