RNA–Protein interactions for RNA: ENST00000432143.2

GTF2I-201, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-201ENST00000432143 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
GTF2I-201ENST00000432143 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
GTF2I-201ENST00000432143 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
GTF2I-201ENST00000432143 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
GTF2I-201ENST00000432143 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
GTF2I-201ENST00000432143 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
GTF2I-201ENST00000432143 FOXD1Q16676 465 aa18.2■□□□□ 0.5
GTF2I-201ENST00000432143 ZCCHC6Q5VYS8 1495 aaKnown RBP18.08■□□□□ 0.49
GTF2I-201ENST00000432143 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
GTF2I-201ENST00000432143 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
GTF2I-201ENST00000432143 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
GTF2I-201ENST00000432143 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
GTF2I-201ENST00000432143 ABCC9O60706 1549 aa17.61■□□□□ 0.41
GTF2I-201ENST00000432143 NACADO15069 1562 aa17.47■□□□□ 0.39
GTF2I-201ENST00000432143 SHROOM4Q9ULL8 1493 aa17.44■□□□□ 0.38
GTF2I-201ENST00000432143 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
GTF2I-201ENST00000432143 RB1CC1Q8TDY2 1594 aa17.29■□□□□ 0.36
GTF2I-201ENST00000432143 ADRA2BP18089 450 aa17.24■□□□□ 0.35
GTF2I-201ENST00000432143 SCRIBQ14160 1630 aa17.16■□□□□ 0.34
GTF2I-201ENST00000432143 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
GTF2I-201ENST00000432143 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
GTF2I-201ENST00000432143 MSH5O43196 834 aa16.8■□□□□ 0.28
GTF2I-201ENST00000432143 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
GTF2I-201ENST00000432143 BICRAQ9NZM4 1560 aa16.7■□□□□ 0.26
GTF2I-201ENST00000432143 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
GTF2I-201ENST00000432143 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
GTF2I-201ENST00000432143 BAZ1AQ9NRL2 1556 aaPredicted RBP16.61■□□□□ 0.25
GTF2I-201ENST00000432143 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
GTF2I-201ENST00000432143 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
GTF2I-201ENST00000432143 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
GTF2I-201ENST00000432143 WIZO95785 1651 aa16.38■□□□□ 0.21
GTF2I-201ENST00000432143 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
GTF2I-201ENST00000432143 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
GTF2I-201ENST00000432143 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
GTF2I-201ENST00000432143 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
GTF2I-201ENST00000432143 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
GTF2I-201ENST00000432143 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
GTF2I-201ENST00000432143 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
GTF2I-201ENST00000432143 HMGXB3Q12766 1538 aa16.11■□□□□ 0.17
GTF2I-201ENST00000432143 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
GTF2I-201ENST00000432143 CC2D2AQ9P2K1 1620 aa15.95■□□□□ 0.14
GTF2I-201ENST00000432143 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
GTF2I-201ENST00000432143 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
GTF2I-201ENST00000432143 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
GTF2I-201ENST00000432143 CFTRP13569 1480 aa15.76■□□□□ 0.11
GTF2I-201ENST00000432143 ABCC8Q09428 1581 aa15.72■□□□□ 0.11
GTF2I-201ENST00000432143 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.11
GTF2I-201ENST00000432143 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
GTF2I-201ENST00000432143 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
GTF2I-201ENST00000432143 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
GTF2I-201ENST00000432143 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
GTF2I-201ENST00000432143 EEA1Q15075 1411 aa15.59■□□□□ 0.09
GTF2I-201ENST00000432143 SYNJ1O43426 1573 aa15.58■□□□□ 0.09
GTF2I-201ENST00000432143 TOP2BQ02880 1626 aa15.56■□□□□ 0.08
GTF2I-201ENST00000432143 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
GTF2I-201ENST00000432143 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
GTF2I-201ENST00000432143 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
GTF2I-201ENST00000432143 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
GTF2I-201ENST00000432143 CUX1P39880 1505 aa15.49■□□□□ 0.07
GTF2I-201ENST00000432143 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
GTF2I-201ENST00000432143 SOGA1O94964 1423 aa15.46■□□□□ 0.07
GTF2I-201ENST00000432143 LOC105371045A0A1W2PR82 267 aa15.46■□□□□ 0.07
GTF2I-201ENST00000432143 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
GTF2I-201ENST00000432143 NESP48681 1621 aa15.45■□□□□ 0.06
GTF2I-201ENST00000432143 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
GTF2I-201ENST00000432143 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
GTF2I-201ENST00000432143 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
GTF2I-201ENST00000432143 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
GTF2I-201ENST00000432143 RUSC2Q8N2Y8 1516 aa15.37■□□□□ 0.05
GTF2I-201ENST00000432143 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
GTF2I-201ENST00000432143 KIF27Q86VH2 1401 aa15.34■□□□□ 0.05
GTF2I-201ENST00000432143 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.05
GTF2I-201ENST00000432143 GOLGA3Q08378 1498 aa15.32■□□□□ 0.04
GTF2I-201ENST00000432143 KIF21BO75037 1637 aa15.31■□□□□ 0.04
GTF2I-201ENST00000432143 URB2Q14146 1524 aaKnown RBP15.28■□□□□ 0.04
GTF2I-201ENST00000432143 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
GTF2I-201ENST00000432143 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.03
GTF2I-201ENST00000432143 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
GTF2I-201ENST00000432143 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
GTF2I-201ENST00000432143 CUX2O14529 1486 aa15.25■□□□□ 0.03
GTF2I-201ENST00000432143 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
GTF2I-201ENST00000432143 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
GTF2I-201ENST00000432143 PRXQ9BXM0 1461 aa15.23■□□□□ 0.03
GTF2I-201ENST00000432143 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
GTF2I-201ENST00000432143 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
GTF2I-201ENST00000432143 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
GTF2I-201ENST00000432143 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
GTF2I-201ENST00000432143 RAPGEF2Q9Y4G8 1499 aa15.17■□□□□ 0.02
GTF2I-201ENST00000432143 IGF1RP08069 1367 aa15.16■□□□□ 0.02
GTF2I-201ENST00000432143 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
GTF2I-201ENST00000432143 WDR62O43379 1518 aa15.15■□□□□ 0.02
GTF2I-201ENST00000432143 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
GTF2I-201ENST00000432143 WDR97A6NE52 1622 aa15.13■□□□□ 0.01
GTF2I-201ENST00000432143 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
GTF2I-201ENST00000432143 CARMIL1Q5VZK9 1371 aa15.1■□□□□ 0.01
GTF2I-201ENST00000432143 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
GTF2I-201ENST00000432143 IFT140Q96RY7 1462 aa15.08■□□□□ 0
GTF2I-201ENST00000432143 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
GTF2I-201ENST00000432143 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
GTF2I-201ENST00000432143 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms