RNA–Protein interactions for RNA: ENST00000432071.1

VAMP8-203, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 664 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-203ENST00000432071 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
VAMP8-203ENST00000432071 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
VAMP8-203ENST00000432071 ABCC9O60706 1549 aa31.45■■■□□ 2.63
VAMP8-203ENST00000432071 DCAF8L2P0C7V8 631 aa30.12■■■□□ 2.41
VAMP8-203ENST00000432071 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
VAMP8-203ENST00000432071 NACADO15069 1562 aa29.86■■■□□ 2.37
VAMP8-203ENST00000432071 ZCCHC6Q5VYS8 1495 aaKnown RBP29.59■■■□□ 2.33
VAMP8-203ENST00000432071 MYO15BQ96JP2 1530 aa29.51■■■□□ 2.32
VAMP8-203ENST00000432071 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.31
VAMP8-203ENST00000432071 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
VAMP8-203ENST00000432071 DCAF1Q9Y4B6 1507 aa29.33■■■□□ 2.29
VAMP8-203ENST00000432071 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
VAMP8-203ENST00000432071 BICRAQ9NZM4 1560 aa29.15■■■□□ 2.26
VAMP8-203ENST00000432071 SCRIBQ14160 1630 aa29.05■■■□□ 2.24
VAMP8-203ENST00000432071 SHROOM4Q9ULL8 1493 aa28.6■■■□□ 2.17
VAMP8-203ENST00000432071 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
VAMP8-203ENST00000432071 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
VAMP8-203ENST00000432071 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
VAMP8-203ENST00000432071 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
VAMP8-203ENST00000432071 ATAD2BQ9ULI0 1458 aa27.62■■■□□ 2.01
VAMP8-203ENST00000432071 NCAPD3P42695 1498 aa27.6■■■□□ 2.01
VAMP8-203ENST00000432071 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
VAMP8-203ENST00000432071 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
VAMP8-203ENST00000432071 SMARCA2P51531 1590 aa27.5■■□□□ 1.99
VAMP8-203ENST00000432071 HMGXB3Q12766 1538 aa27.38■■□□□ 1.97
VAMP8-203ENST00000432071 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
VAMP8-203ENST00000432071 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
VAMP8-203ENST00000432071 WIZO95785 1651 aa27.21■■□□□ 1.95
VAMP8-203ENST00000432071 NESP48681 1621 aa27.16■■□□□ 1.94
VAMP8-203ENST00000432071 RSF1Q96T23 1441 aaPredicted RBP27.1■■□□□ 1.93
VAMP8-203ENST00000432071 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
VAMP8-203ENST00000432071 LAMC3Q9Y6N6 1575 aa26.87■■□□□ 1.89
VAMP8-203ENST00000432071 CADPSQ9ULU8 1353 aa26.83■■□□□ 1.88
VAMP8-203ENST00000432071 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
VAMP8-203ENST00000432071 CUX2O14529 1486 aa26.76■■□□□ 1.87
VAMP8-203ENST00000432071 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
VAMP8-203ENST00000432071 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
VAMP8-203ENST00000432071 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
VAMP8-203ENST00000432071 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
VAMP8-203ENST00000432071 CFTRP13569 1480 aa26.58■■□□□ 1.85
VAMP8-203ENST00000432071 FANCD2Q9BXW9 1451 aa26.53■■□□□ 1.84
VAMP8-203ENST00000432071 MRC2Q9UBG0 1479 aa26.5■■□□□ 1.83
VAMP8-203ENST00000432071 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
VAMP8-203ENST00000432071 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
VAMP8-203ENST00000432071 WDR62O43379 1518 aa26.39■■□□□ 1.81
VAMP8-203ENST00000432071 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
VAMP8-203ENST00000432071 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
VAMP8-203ENST00000432071 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
VAMP8-203ENST00000432071 TOPBP1Q92547 1522 aa26.08■■□□□ 1.77
VAMP8-203ENST00000432071 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
VAMP8-203ENST00000432071 ABCC8Q09428 1581 aa25.95■■□□□ 1.75
VAMP8-203ENST00000432071 ZNF608Q9ULD9 1512 aaPredicted RBP25.94■■□□□ 1.74
VAMP8-203ENST00000432071 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
VAMP8-203ENST00000432071 POLA1P09884 1462 aaPredicted RBP25.84■■□□□ 1.73
VAMP8-203ENST00000432071 RAD54L2Q9Y4B4 1467 aa25.82■■□□□ 1.72
VAMP8-203ENST00000432071 CUX1P39880 1505 aa25.81■■□□□ 1.72
VAMP8-203ENST00000432071 AQRO60306 1485 aaKnown RBP eCLIP25.79■■□□□ 1.72
VAMP8-203ENST00000432071 TARBP1Q13395 1621 aaKnown RBP25.78■■□□□ 1.72
VAMP8-203ENST00000432071 SOGA1O94964 1423 aa25.76■■□□□ 1.71
VAMP8-203ENST00000432071 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
VAMP8-203ENST00000432071 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
VAMP8-203ENST00000432071 EIF4G3O43432 1585 aaKnown RBP25.73■■□□□ 1.71
VAMP8-203ENST00000432071 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
VAMP8-203ENST00000432071 FBLN2P98095 1184 aa25.59■■□□□ 1.69
VAMP8-203ENST00000432071 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
VAMP8-203ENST00000432071 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
VAMP8-203ENST00000432071 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
VAMP8-203ENST00000432071 CHD1O14646 1710 aa25.49■■□□□ 1.67
VAMP8-203ENST00000432071 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
VAMP8-203ENST00000432071 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
VAMP8-203ENST00000432071 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
VAMP8-203ENST00000432071 ABCA10Q8WWZ4 1543 aa25.43■■□□□ 1.66
VAMP8-203ENST00000432071 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
VAMP8-203ENST00000432071 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
VAMP8-203ENST00000432071 GAPVD1Q14C86 1478 aa25.42■■□□□ 1.66
VAMP8-203ENST00000432071 CHMP7Q8WUX9 453 aaPredicted RBP25.4■■□□□ 1.66
VAMP8-203ENST00000432071 PBRM1Q86U86 1689 aa25.35■■□□□ 1.65
VAMP8-203ENST00000432071 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
VAMP8-203ENST00000432071 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
VAMP8-203ENST00000432071 RIMBP3CA6NJZ7 1639 aa25.32■■□□□ 1.64
VAMP8-203ENST00000432071 RIMBP3BA6NNM3 1639 aa25.32■■□□□ 1.64
VAMP8-203ENST00000432071 RIMBP3Q9UFD9 1639 aa25.32■■□□□ 1.64
VAMP8-203ENST00000432071 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
VAMP8-203ENST00000432071 ARHGEF11O15085 1522 aa25.28■■□□□ 1.64
VAMP8-203ENST00000432071 CYB5RLQ6IPT4 315 aa25.19■■□□□ 1.62
VAMP8-203ENST00000432071 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
VAMP8-203ENST00000432071 ADAMTS12P58397 1594 aa25.14■■□□□ 1.61
VAMP8-203ENST00000432071 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
VAMP8-203ENST00000432071 FHAD1B1AJZ9 1412 aa25.1■■□□□ 1.61
VAMP8-203ENST00000432071 ERICH3Q5RHP9 1530 aa25.09■■□□□ 1.61
VAMP8-203ENST00000432071 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
VAMP8-203ENST00000432071 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
VAMP8-203ENST00000432071 KIF27Q86VH2 1401 aa25■■□□□ 1.59
VAMP8-203ENST00000432071 IGF1RP08069 1367 aa24.99■■□□□ 1.59
VAMP8-203ENST00000432071 NUP160Q12769 1436 aa24.99■■□□□ 1.59
VAMP8-203ENST00000432071 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
VAMP8-203ENST00000432071 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
VAMP8-203ENST00000432071 JPH4Q96JJ6 628 aa24.84■■□□□ 1.57
VAMP8-203ENST00000432071 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.57
VAMP8-203ENST00000432071 SHROOM2Q13796 1616 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms