RNA–Protein interactions for RNA: ENST00000431519.6

CDV3-203, Transcript of CDV3 homolog, humanhuman

TSL 1 (best) BASIC

Gene CDV3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-203ENST00000431519 DDX3XO00571 662 aaKnown RBP eCLIP31.2■■■□□ 2.595e-36■□□□□ 11.1
CDV3-203ENST00000431519 HNRNPLP14866 589 aaKnown RBP eCLIP32.62■■■□□ 2.814e-15■■■■■ 48.6
CDV3-203ENST00000431519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP50.82■■■■■ 5.732e-13■■□□□ 11.7
CDV3-203ENST00000431519 AQRO60306 1485 aaKnown RBP eCLIP55.87■■■■■ 6.532e-11■■■□□ 16.1
CDV3-203ENST00000431519 RBM15Q96T37 977 aaKnown RBP eCLIP31■■■□□ 2.552e-11■■■□□ 14.8
CDV3-203ENST00000431519 GRSF1Q12849 480 aaKnown RBP eCLIP32.98■■■□□ 2.873e-11■■□□□ 12
CDV3-203ENST00000431519 RBM22Q9NW64 420 aaKnown RBP eCLIP30.85■■■□□ 2.534e-11■□□□□ 11.2
CDV3-203ENST00000431519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP48.05■■■■■ 5.285e-9■■■□□ 15
CDV3-203ENST00000431519 FTOQ9C0B1 505 aaKnown RBP eCLIP35.76■■■■□ 3.321e-8■□□□□ 8.1
CDV3-203ENST00000431519 PUM1Q14671 1186 aaKnown RBP eCLIP32.92■■■□□ 2.861e-8■■□□□ 12.6
CDV3-203ENST00000431519 ZNF800Q2TB10 664 aaPredicted RBP eCLIP28.92■■■□□ 2.226e-8■■■□□ 16.5
CDV3-203ENST00000431519 SDAD1Q9NVU7 687 aaKnown RBP eCLIP28.52■■■□□ 2.167e-8■■□□□ 13.1
CDV3-203ENST00000431519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP36.55■■■■□ 3.443e-7■□□□□ 8.1
CDV3-203ENST00000431519 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP26.64■■□□□ 1.854e-7■■□□□ 11.9
CDV3-203ENST00000431519 AATFQ9NY61 560 aaKnown RBP eCLIP37.9■■■■□ 3.664e-7■□□□□ 10
CDV3-203ENST00000431519 EFTUD2Q15029 972 aaKnown RBP eCLIP28.79■■■□□ 2.24e-7■■■■■ 28.3
CDV3-203ENST00000431519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.86■■■□□ 2.854e-7■■■■■ 40.6
CDV3-203ENST00000431519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.83■■■□□ 2.537e-7■□□□□ 9.7
CDV3-203ENST00000431519 TRA2AQ13595 282 aaKnown RBP eCLIP30.6■■■□□ 2.497e-7■□□□□ 9.9
CDV3-203ENST00000431519 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP33.84■■■■□ 3.019e-7■■■■□ 24.5
CDV3-203ENST00000431519 DDX24Q9GZR7 859 aaKnown RBP eCLIP37.35■■■■□ 3.579e-7■□□□□ 9.1
CDV3-203ENST00000431519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP42.35■■■■■ 4.371e-6■■■□□ 16.4
CDV3-203ENST00000431519 HNRNPMP52272 730 aaKnown RBP eCLIP49.56■■■■■ 5.522e-6■□□□□ 10.3
CDV3-203ENST00000431519 AGGF1Q8N302 714 aaeCLIP29.47■■■□□ 2.313e-6■□□□□ 9.6
Retrieved 24 of 24 RNA–protein pairs in 6.2 ms