RNA–Protein interactions for RNA: ENST00000431207.5

LRRC23-206, Transcript of leucine rich repeat containing 23, humanhuman

TSL 3

Gene LRRC23, Length 1,140 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-206ENST00000431207 NISCHQ9Y2I1 1504 aa30.81■■■□□ 2.52
LRRC23-206ENST00000431207 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
LRRC23-206ENST00000431207 ABCC9O60706 1549 aa27.19■■□□□ 1.94
LRRC23-206ENST00000431207 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
LRRC23-206ENST00000431207 RB1CC1Q8TDY2 1594 aa25.95■■□□□ 1.74
LRRC23-206ENST00000431207 NACADO15069 1562 aa25.85■■□□□ 1.73
LRRC23-206ENST00000431207 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
LRRC23-206ENST00000431207 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.68
LRRC23-206ENST00000431207 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.66
LRRC23-206ENST00000431207 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
LRRC23-206ENST00000431207 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
LRRC23-206ENST00000431207 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
LRRC23-206ENST00000431207 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
LRRC23-206ENST00000431207 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
LRRC23-206ENST00000431207 SHROOM4Q9ULL8 1493 aa24.79■■□□□ 1.56
LRRC23-206ENST00000431207 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
LRRC23-206ENST00000431207 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
LRRC23-206ENST00000431207 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
LRRC23-206ENST00000431207 SMARCA4P51532 1647 aa23.94■■□□□ 1.42
LRRC23-206ENST00000431207 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
LRRC23-206ENST00000431207 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
LRRC23-206ENST00000431207 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
LRRC23-206ENST00000431207 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
LRRC23-206ENST00000431207 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
LRRC23-206ENST00000431207 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
LRRC23-206ENST00000431207 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
LRRC23-206ENST00000431207 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
LRRC23-206ENST00000431207 WIZO95785 1651 aa23.51■■□□□ 1.35
LRRC23-206ENST00000431207 NESP48681 1621 aa23.48■■□□□ 1.35
LRRC23-206ENST00000431207 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
LRRC23-206ENST00000431207 ERCC6Q03468 1493 aa23.41■■□□□ 1.34
LRRC23-206ENST00000431207 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
LRRC23-206ENST00000431207 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
LRRC23-206ENST00000431207 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
LRRC23-206ENST00000431207 CUX2O14529 1486 aa23.18■■□□□ 1.3
LRRC23-206ENST00000431207 PDS5BQ9NTI5 1447 aa23.16■■□□□ 1.3
LRRC23-206ENST00000431207 KIF21AQ7Z4S6 1674 aa23.11■■□□□ 1.29
LRRC23-206ENST00000431207 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
LRRC23-206ENST00000431207 CFTRP13569 1480 aa23.01■■□□□ 1.27
LRRC23-206ENST00000431207 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
LRRC23-206ENST00000431207 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
LRRC23-206ENST00000431207 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
LRRC23-206ENST00000431207 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
LRRC23-206ENST00000431207 DNAJC5Q9H3Z4 198 aa22.85■■□□□ 1.25
LRRC23-206ENST00000431207 WDR62O43379 1518 aa22.83■■□□□ 1.25
LRRC23-206ENST00000431207 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
LRRC23-206ENST00000431207 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
LRRC23-206ENST00000431207 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
LRRC23-206ENST00000431207 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
LRRC23-206ENST00000431207 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
LRRC23-206ENST00000431207 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
LRRC23-206ENST00000431207 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
LRRC23-206ENST00000431207 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
LRRC23-206ENST00000431207 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
LRRC23-206ENST00000431207 CUX1P39880 1505 aa22.31■■□□□ 1.16
LRRC23-206ENST00000431207 RAD54L2Q9Y4B4 1467 aa22.31■■□□□ 1.16
LRRC23-206ENST00000431207 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
LRRC23-206ENST00000431207 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.16
LRRC23-206ENST00000431207 OSCARQ8IYS5 282 aa22.29■■□□□ 1.16
LRRC23-206ENST00000431207 SOGA1O94964 1423 aa22.28■■□□□ 1.16
LRRC23-206ENST00000431207 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
LRRC23-206ENST00000431207 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
LRRC23-206ENST00000431207 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
LRRC23-206ENST00000431207 FBLN2P98095 1184 aa22.12■■□□□ 1.13
LRRC23-206ENST00000431207 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
LRRC23-206ENST00000431207 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
LRRC23-206ENST00000431207 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
LRRC23-206ENST00000431207 SNAPC4Q5SXM2 1469 aa22.03■■□□□ 1.12
LRRC23-206ENST00000431207 CHD1O14646 1710 aa22.02■■□□□ 1.12
LRRC23-206ENST00000431207 WDR97A6NE52 1622 aa22.02■■□□□ 1.11
LRRC23-206ENST00000431207 TOP2BQ02880 1626 aa22.02■■□□□ 1.11
LRRC23-206ENST00000431207 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
LRRC23-206ENST00000431207 GRIN2BQ13224 1484 aa22■■□□□ 1.11
LRRC23-206ENST00000431207 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
LRRC23-206ENST00000431207 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
LRRC23-206ENST00000431207 CHMP7Q8WUX9 453 aaPredicted RBP21.98■■□□□ 1.11
LRRC23-206ENST00000431207 MAGI1Q96QZ7 1491 aaPredicted RBP21.93■■□□□ 1.1
LRRC23-206ENST00000431207 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
LRRC23-206ENST00000431207 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
LRRC23-206ENST00000431207 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
LRRC23-206ENST00000431207 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
LRRC23-206ENST00000431207 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
LRRC23-206ENST00000431207 SYNJ2O15056 1496 aa21.88■■□□□ 1.09
LRRC23-206ENST00000431207 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
LRRC23-206ENST00000431207 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
LRRC23-206ENST00000431207 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
LRRC23-206ENST00000431207 ADAMTS12P58397 1594 aa21.73■■□□□ 1.07
LRRC23-206ENST00000431207 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
LRRC23-206ENST00000431207 ERICH3Q5RHP9 1530 aa21.72■■□□□ 1.07
LRRC23-206ENST00000431207 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
LRRC23-206ENST00000431207 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
LRRC23-206ENST00000431207 CEP170Q5SW79 1584 aa21.63■■□□□ 1.05
LRRC23-206ENST00000431207 NUP160Q12769 1436 aa21.63■■□□□ 1.05
LRRC23-206ENST00000431207 IGF1RP08069 1367 aa21.62■■□□□ 1.05
LRRC23-206ENST00000431207 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
LRRC23-206ENST00000431207 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
LRRC23-206ENST00000431207 JPH4Q96JJ6 628 aa21.49■■□□□ 1.03
LRRC23-206ENST00000431207 CARMIL1Q5VZK9 1371 aa21.48■■□□□ 1.03
LRRC23-206ENST00000431207 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
LRRC23-206ENST00000431207 SHROOM2Q13796 1616 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms