RNA–Protein interactions for RNA: ENST00000429740.1

LRRC23-205, Transcript of leucine rich repeat containing 23, humanhuman

TSL 1 (best) BASIC

Gene LRRC23, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-205ENST00000429740 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
LRRC23-205ENST00000429740 CCDC180Q9P1Z9 1646 aa22.33■■□□□ 1.17
LRRC23-205ENST00000429740 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
LRRC23-205ENST00000429740 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
LRRC23-205ENST00000429740 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
LRRC23-205ENST00000429740 DCAF8L2P0C7V8 631 aa20.87■□□□□ 0.93
LRRC23-205ENST00000429740 ABCC9O60706 1549 aa20.83■□□□□ 0.93
LRRC23-205ENST00000429740 NACADO15069 1562 aa20.77■□□□□ 0.92
LRRC23-205ENST00000429740 RB1CC1Q8TDY2 1594 aa20.57■□□□□ 0.88
LRRC23-205ENST00000429740 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
LRRC23-205ENST00000429740 SCRIBQ14160 1630 aa20.33■□□□□ 0.84
LRRC23-205ENST00000429740 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
LRRC23-205ENST00000429740 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
LRRC23-205ENST00000429740 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
LRRC23-205ENST00000429740 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
LRRC23-205ENST00000429740 RSF1Q96T23 1441 aaPredicted RBP19.72■□□□□ 0.75
LRRC23-205ENST00000429740 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
LRRC23-205ENST00000429740 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
LRRC23-205ENST00000429740 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
LRRC23-205ENST00000429740 SMARCA4P51532 1647 aa19.58■□□□□ 0.72
LRRC23-205ENST00000429740 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
LRRC23-205ENST00000429740 WIZO95785 1651 aa19.42■□□□□ 0.7
LRRC23-205ENST00000429740 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
LRRC23-205ENST00000429740 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
LRRC23-205ENST00000429740 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
LRRC23-205ENST00000429740 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
LRRC23-205ENST00000429740 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
LRRC23-205ENST00000429740 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
LRRC23-205ENST00000429740 HMGXB3Q12766 1538 aa19.14■□□□□ 0.65
LRRC23-205ENST00000429740 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
LRRC23-205ENST00000429740 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
LRRC23-205ENST00000429740 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
LRRC23-205ENST00000429740 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
LRRC23-205ENST00000429740 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
LRRC23-205ENST00000429740 CFTRP13569 1480 aa18.68■□□□□ 0.58
LRRC23-205ENST00000429740 PRDM2Q13029 1718 aa18.65■□□□□ 0.58
LRRC23-205ENST00000429740 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
LRRC23-205ENST00000429740 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
LRRC23-205ENST00000429740 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
LRRC23-205ENST00000429740 EEA1Q15075 1411 aa18.52■□□□□ 0.56
LRRC23-205ENST00000429740 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
LRRC23-205ENST00000429740 TOP2BQ02880 1626 aa18.48■□□□□ 0.55
LRRC23-205ENST00000429740 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
LRRC23-205ENST00000429740 SYNJ1O43426 1573 aa18.45■□□□□ 0.54
LRRC23-205ENST00000429740 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
LRRC23-205ENST00000429740 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
LRRC23-205ENST00000429740 CUX1P39880 1505 aa18.33■□□□□ 0.53
LRRC23-205ENST00000429740 CEP164Q9UPV0 1460 aa18.3■□□□□ 0.52
LRRC23-205ENST00000429740 FAM9AQ8IZU1 332 aaPredicted RBP18.29■□□□□ 0.52
LRRC23-205ENST00000429740 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.52
LRRC23-205ENST00000429740 SOGA1O94964 1423 aa18.26■□□□□ 0.51
LRRC23-205ENST00000429740 NESP48681 1621 aa18.25■□□□□ 0.51
LRRC23-205ENST00000429740 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
LRRC23-205ENST00000429740 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
LRRC23-205ENST00000429740 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
LRRC23-205ENST00000429740 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
LRRC23-205ENST00000429740 KIF21BO75037 1637 aa18.18■□□□□ 0.5
LRRC23-205ENST00000429740 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
LRRC23-205ENST00000429740 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
LRRC23-205ENST00000429740 FGD5Q6ZNL6 1462 aa18.16■□□□□ 0.5
LRRC23-205ENST00000429740 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
LRRC23-205ENST00000429740 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
LRRC23-205ENST00000429740 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
LRRC23-205ENST00000429740 TNIKQ9UKE5 1360 aa18.09■□□□□ 0.49
LRRC23-205ENST00000429740 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
LRRC23-205ENST00000429740 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
LRRC23-205ENST00000429740 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
LRRC23-205ENST00000429740 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
LRRC23-205ENST00000429740 CUX2O14529 1486 aa18.06■□□□□ 0.48
LRRC23-205ENST00000429740 PRXQ9BXM0 1461 aa18.02■□□□□ 0.48
LRRC23-205ENST00000429740 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
LRRC23-205ENST00000429740 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
LRRC23-205ENST00000429740 WDR62O43379 1518 aa17.98■□□□□ 0.47
LRRC23-205ENST00000429740 WDR97A6NE52 1622 aa17.97■□□□□ 0.47
LRRC23-205ENST00000429740 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
LRRC23-205ENST00000429740 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
LRRC23-205ENST00000429740 CUL7Q14999 1698 aa17.93■□□□□ 0.46
LRRC23-205ENST00000429740 IGF1RP08069 1367 aa17.93■□□□□ 0.46
LRRC23-205ENST00000429740 RAD54L2Q9Y4B4 1467 aa17.93■□□□□ 0.46
LRRC23-205ENST00000429740 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
LRRC23-205ENST00000429740 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
LRRC23-205ENST00000429740 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
LRRC23-205ENST00000429740 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
LRRC23-205ENST00000429740 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
LRRC23-205ENST00000429740 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
LRRC23-205ENST00000429740 THOC2Q8NI27 1593 aaKnown RBP17.85■□□□□ 0.45
LRRC23-205ENST00000429740 CLIP1P30622 1438 aa17.82■□□□□ 0.44
LRRC23-205ENST00000429740 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
LRRC23-205ENST00000429740 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
LRRC23-205ENST00000429740 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
LRRC23-205ENST00000429740 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
LRRC23-205ENST00000429740 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
LRRC23-205ENST00000429740 CTTNBP2Q8WZ74 1663 aa17.67■□□□□ 0.42
LRRC23-205ENST00000429740 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
LRRC23-205ENST00000429740 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
LRRC23-205ENST00000429740 EFCAB5A4FU69 1503 aa17.65■□□□□ 0.42
LRRC23-205ENST00000429740 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
LRRC23-205ENST00000429740 AQRO60306 1485 aaKnown RBP eCLIP17.64■□□□□ 0.41
LRRC23-205ENST00000429740 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
LRRC23-205ENST00000429740 APLP2Q06481 763 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms