RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 NISCHQ9Y2I1 1504 aa28.86■■■□□ 2.21
MARK3-205ENST00000429436 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
MARK3-205ENST00000429436 SUPT5HO00267 1087 aaKnown RBP25.41■■□□□ 1.66
MARK3-205ENST00000429436 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
MARK3-205ENST00000429436 PELP1Q8IZL8 1130 aaKnown RBP24.78■■□□□ 1.56
MARK3-205ENST00000429436 PPARGC1BQ86YN6 1023 aaKnown RBP24.47■■□□□ 1.51
MARK3-205ENST00000429436 HRCP23327 699 aa24.45■■□□□ 1.5
MARK3-205ENST00000429436 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.5
MARK3-205ENST00000429436 ZCCHC6Q5VYS8 1495 aaKnown RBP24.35■■□□□ 1.49
MARK3-205ENST00000429436 MYO15BQ96JP2 1530 aa24.28■■□□□ 1.48
MARK3-205ENST00000429436 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
MARK3-205ENST00000429436 MYT1Q01538 1121 aa24.23■■□□□ 1.47
MARK3-205ENST00000429436 LOC105371045A0A1W2PR82 267 aa24.04■■□□□ 1.44
MARK3-205ENST00000429436 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
MARK3-205ENST00000429436 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
MARK3-205ENST00000429436 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
MARK3-205ENST00000429436 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
MARK3-205ENST00000429436 TRIM41Q8WV44 630 aa23.39■■□□□ 1.34
MARK3-205ENST00000429436 TRIM26Q12899 539 aaPredicted RBP23.37■■□□□ 1.33
MARK3-205ENST00000429436 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
MARK3-205ENST00000429436 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
MARK3-205ENST00000429436 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
MARK3-205ENST00000429436 PRKCSHP14314 528 aaPredicted RBP23.04■■□□□ 1.28
MARK3-205ENST00000429436 ABCC9O60706 1549 aa22.98■■□□□ 1.27
MARK3-205ENST00000429436 TTBK1Q5TCY1 1321 aaPredicted RBP22.98■■□□□ 1.27
MARK3-205ENST00000429436 RB1CC1Q8TDY2 1594 aa22.92■■□□□ 1.26
MARK3-205ENST00000429436 ZEB1P37275 1124 aaPredicted RBP22.81■■□□□ 1.24
MARK3-205ENST00000429436 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
MARK3-205ENST00000429436 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
MARK3-205ENST00000429436 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
MARK3-205ENST00000429436 BCL11AQ9H165 835 aa22.78■■□□□ 1.24
MARK3-205ENST00000429436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
MARK3-205ENST00000429436 ACIN1Q9UKV3 1341 aaKnown RBP22.71■■□□□ 1.23
MARK3-205ENST00000429436 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
MARK3-205ENST00000429436 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
MARK3-205ENST00000429436 WIZO95785 1651 aa22.51■■□□□ 1.19
MARK3-205ENST00000429436 YTHDC1Q96MU7 727 aaKnown RBP22.45■■□□□ 1.18
MARK3-205ENST00000429436 ERICH6Q7L0X2 663 aa22.44■■□□□ 1.18
MARK3-205ENST00000429436 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
MARK3-205ENST00000429436 UBTFP17480 764 aaKnown RBP22.39■■□□□ 1.18
MARK3-205ENST00000429436 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.16
MARK3-205ENST00000429436 NACADO15069 1562 aa22.32■■□□□ 1.16
MARK3-205ENST00000429436 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
MARK3-205ENST00000429436 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
MARK3-205ENST00000429436 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
MARK3-205ENST00000429436 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
MARK3-205ENST00000429436 SOGA1O94964 1423 aa22.19■■□□□ 1.14
MARK3-205ENST00000429436 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
MARK3-205ENST00000429436 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
MARK3-205ENST00000429436 CEP162Q5TB80 1403 aa22.11■■□□□ 1.13
MARK3-205ENST00000429436 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
MARK3-205ENST00000429436 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
MARK3-205ENST00000429436 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
MARK3-205ENST00000429436 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
MARK3-205ENST00000429436 APLP2Q06481 763 aa21.9■■□□□ 1.1
MARK3-205ENST00000429436 EIF4G1Q04637 1599 aaKnown RBP21.88■■□□□ 1.09
MARK3-205ENST00000429436 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
MARK3-205ENST00000429436 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
MARK3-205ENST00000429436 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
MARK3-205ENST00000429436 WRNQ14191 1432 aaPredicted RBP eCLIP21.81■■□□□ 1.08
MARK3-205ENST00000429436 MIER1Q8N108 512 aa21.76■■□□□ 1.07
MARK3-205ENST00000429436 SLC24A1O60721 1099 aa21.74■■□□□ 1.07
MARK3-205ENST00000429436 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
MARK3-205ENST00000429436 CLIP1P30622 1438 aa21.67■■□□□ 1.06
MARK3-205ENST00000429436 EEA1Q15075 1411 aa21.66■■□□□ 1.06
MARK3-205ENST00000429436 ITGAEP38570 1179 aa21.62■■□□□ 1.05
MARK3-205ENST00000429436 ANP32EQ9BTT0 268 aa21.62■■□□□ 1.05
MARK3-205ENST00000429436 UNC13AQ9UPW8 1703 aa21.62■■□□□ 1.05
MARK3-205ENST00000429436 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
MARK3-205ENST00000429436 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
MARK3-205ENST00000429436 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
MARK3-205ENST00000429436 BCANQ96GW7 911 aa21.47■■□□□ 1.03
MARK3-205ENST00000429436 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
MARK3-205ENST00000429436 KANK4Q5T7N3 995 aaPredicted RBP21.45■■□□□ 1.02
MARK3-205ENST00000429436 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
MARK3-205ENST00000429436 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
MARK3-205ENST00000429436 TSHZ2Q9NRE2 1034 aa21.41■■□□□ 1.02
MARK3-205ENST00000429436 SUPT16HQ9Y5B9 1047 aaKnown RBP21.41■■□□□ 1.02
MARK3-205ENST00000429436 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.01
MARK3-205ENST00000429436 ANO8Q9HCE9 1232 aaPredicted RBP21.34■■□□□ 1.01
MARK3-205ENST00000429436 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
MARK3-205ENST00000429436 EIF5BO60841 1220 aaKnown RBP21.3■■□□□ 1
MARK3-205ENST00000429436 KIF21BO75037 1637 aa21.3■■□□□ 1
MARK3-205ENST00000429436 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
MARK3-205ENST00000429436 DHX57Q6P158 1386 aaKnown RBP21.22■□□□□ 0.99
MARK3-205ENST00000429436 FAM50AQ14320 339 aaKnown RBP21.14■□□□□ 0.98
MARK3-205ENST00000429436 KCNH8Q96L42 1107 aa21.14■□□□□ 0.98
MARK3-205ENST00000429436 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
MARK3-205ENST00000429436 HIRIP3Q9BW71 556 aaPredicted RBP21.13■□□□□ 0.97
MARK3-205ENST00000429436 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
MARK3-205ENST00000429436 CCDC136Q96JN2 1154 aa21.12■□□□□ 0.97
MARK3-205ENST00000429436 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
MARK3-205ENST00000429436 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
MARK3-205ENST00000429436 PLEKHG5O94827 1062 aa21.05■□□□□ 0.96
MARK3-205ENST00000429436 KIF27Q86VH2 1401 aa21.05■□□□□ 0.96
MARK3-205ENST00000429436 CCNB3Q8WWL7 1395 aa21.04■□□□□ 0.96
MARK3-205ENST00000429436 PRXQ9BXM0 1461 aa21.03■□□□□ 0.96
MARK3-205ENST00000429436 DDX10Q13206 875 aaKnown RBP21.03■□□□□ 0.96
MARK3-205ENST00000429436 FKBP8Q14318 412 aa21■□□□□ 0.95
MARK3-205ENST00000429436 CUX1P39880 1505 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms