RNA–Protein interactions for RNA: ENST00000428996.1

AC239367.3-201, humanhuman

BASIC

Gene AC239367.3, Length 814 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239367.3-201ENST00000428996 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
AC239367.3-201ENST00000428996 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
AC239367.3-201ENST00000428996 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
AC239367.3-201ENST00000428996 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
AC239367.3-201ENST00000428996 PHF23Q9BUL5 403 aaPredicted RBP13.96□□□□□ -0.17
AC239367.3-201ENST00000428996 CCDC180Q9P1Z9 1646 aa13.43□□□□□ -0.26
AC239367.3-201ENST00000428996 FOXD1Q16676 465 aa13.27□□□□□ -0.29
AC239367.3-201ENST00000428996 ABCC9O60706 1549 aa12.99□□□□□ -0.33
AC239367.3-201ENST00000428996 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
AC239367.3-201ENST00000428996 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
AC239367.3-201ENST00000428996 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
AC239367.3-201ENST00000428996 DCAF1Q9Y4B6 1507 aa12.73□□□□□ -0.37
AC239367.3-201ENST00000428996 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
AC239367.3-201ENST00000428996 NACADO15069 1562 aa12.63□□□□□ -0.39
AC239367.3-201ENST00000428996 MSH5O43196 834 aa12.56□□□□□ -0.4
AC239367.3-201ENST00000428996 RB1CC1Q8TDY2 1594 aa12.55□□□□□ -0.4
AC239367.3-201ENST00000428996 SHROOM4Q9ULL8 1493 aa12.52□□□□□ -0.41
AC239367.3-201ENST00000428996 SCRIBQ14160 1630 aa12.35□□□□□ -0.43
AC239367.3-201ENST00000428996 UNC13AQ9UPW8 1703 aa12.33□□□□□ -0.44
AC239367.3-201ENST00000428996 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
AC239367.3-201ENST00000428996 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
AC239367.3-201ENST00000428996 PLPPR3Q6T4P5 718 aa12.2□□□□□ -0.46
AC239367.3-201ENST00000428996 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
AC239367.3-201ENST00000428996 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
AC239367.3-201ENST00000428996 BICRAQ9NZM4 1560 aa12.09□□□□□ -0.47
AC239367.3-201ENST00000428996 ADRA2BP18089 450 aa12.06□□□□□ -0.48
AC239367.3-201ENST00000428996 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
AC239367.3-201ENST00000428996 CECR2Q9BXF3 1484 aa11.97□□□□□ -0.49
AC239367.3-201ENST00000428996 RSF1Q96T23 1441 aaPredicted RBP11.92□□□□□ -0.5
AC239367.3-201ENST00000428996 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
AC239367.3-201ENST00000428996 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
AC239367.3-201ENST00000428996 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
AC239367.3-201ENST00000428996 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
AC239367.3-201ENST00000428996 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
AC239367.3-201ENST00000428996 ATAD2BQ9ULI0 1458 aa11.74□□□□□ -0.53
AC239367.3-201ENST00000428996 WIZO95785 1651 aa11.74□□□□□ -0.53
AC239367.3-201ENST00000428996 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
AC239367.3-201ENST00000428996 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
AC239367.3-201ENST00000428996 NCAPD3P42695 1498 aa11.68□□□□□ -0.54
AC239367.3-201ENST00000428996 BAZ1BQ9UIG0 1483 aaKnown RBP11.67□□□□□ -0.54
AC239367.3-201ENST00000428996 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
AC239367.3-201ENST00000428996 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
AC239367.3-201ENST00000428996 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
AC239367.3-201ENST00000428996 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
AC239367.3-201ENST00000428996 CFTRP13569 1480 aa11.37□□□□□ -0.59
AC239367.3-201ENST00000428996 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
AC239367.3-201ENST00000428996 PDS5BQ9NTI5 1447 aa11.27□□□□□ -0.6
AC239367.3-201ENST00000428996 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
AC239367.3-201ENST00000428996 NESP48681 1621 aa11.27□□□□□ -0.61
AC239367.3-201ENST00000428996 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
AC239367.3-201ENST00000428996 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
AC239367.3-201ENST00000428996 DMRT2Q9Y5R5 561 aa11.23□□□□□ -0.61
AC239367.3-201ENST00000428996 ABCC8Q09428 1581 aa11.22□□□□□ -0.61
AC239367.3-201ENST00000428996 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
AC239367.3-201ENST00000428996 CEP164Q9UPV0 1460 aa11.18□□□□□ -0.62
AC239367.3-201ENST00000428996 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
AC239367.3-201ENST00000428996 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
AC239367.3-201ENST00000428996 CUX2O14529 1486 aa11.17□□□□□ -0.62
AC239367.3-201ENST00000428996 PRDM2Q13029 1718 aa11.15□□□□□ -0.63
AC239367.3-201ENST00000428996 THOC2Q8NI27 1593 aaKnown RBP11.14□□□□□ -0.63
AC239367.3-201ENST00000428996 KCNA4P22459 653 aa11.13□□□□□ -0.63
AC239367.3-201ENST00000428996 FAM9AQ8IZU1 332 aaPredicted RBP11.12□□□□□ -0.63
AC239367.3-201ENST00000428996 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
AC239367.3-201ENST00000428996 CUX1P39880 1505 aa11.11□□□□□ -0.63
AC239367.3-201ENST00000428996 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
AC239367.3-201ENST00000428996 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
AC239367.3-201ENST00000428996 SCAF1Q9H7N4 1312 aaKnown RBP11.09□□□□□ -0.63
AC239367.3-201ENST00000428996 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
AC239367.3-201ENST00000428996 TOPBP1Q92547 1522 aa11.07□□□□□ -0.64
AC239367.3-201ENST00000428996 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
AC239367.3-201ENST00000428996 URB2Q14146 1524 aaKnown RBP11.06□□□□□ -0.64
AC239367.3-201ENST00000428996 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
AC239367.3-201ENST00000428996 SOGA1O94964 1423 aa11.04□□□□□ -0.64
AC239367.3-201ENST00000428996 CSRNP3Q8WYN3 585 aa11.04□□□□□ -0.64
AC239367.3-201ENST00000428996 FGD5Q6ZNL6 1462 aa11.04□□□□□ -0.64
AC239367.3-201ENST00000428996 EEA1Q15075 1411 aa11.03□□□□□ -0.64
AC239367.3-201ENST00000428996 KIF27Q86VH2 1401 aa11□□□□□ -0.65
AC239367.3-201ENST00000428996 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
AC239367.3-201ENST00000428996 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
AC239367.3-201ENST00000428996 RAD54L2Q9Y4B4 1467 aa10.99□□□□□ -0.65
AC239367.3-201ENST00000428996 WDR62O43379 1518 aa10.98□□□□□ -0.65
AC239367.3-201ENST00000428996 RUSC2Q8N2Y8 1516 aa10.98□□□□□ -0.65
AC239367.3-201ENST00000428996 EHMT2Q96KQ7 1210 aa10.96□□□□□ -0.65
AC239367.3-201ENST00000428996 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
AC239367.3-201ENST00000428996 IFT140Q96RY7 1462 aa10.93□□□□□ -0.66
AC239367.3-201ENST00000428996 TDRD9Q8NDG6 1382 aaKnown RBP10.93□□□□□ -0.66
AC239367.3-201ENST00000428996 IGF1RP08069 1367 aa10.92□□□□□ -0.66
AC239367.3-201ENST00000428996 UBTFP17480 764 aaKnown RBP10.91□□□□□ -0.66
AC239367.3-201ENST00000428996 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.66
AC239367.3-201ENST00000428996 GAPVD1Q14C86 1478 aa10.88□□□□□ -0.67
AC239367.3-201ENST00000428996 CARMIL1Q5VZK9 1371 aa10.88□□□□□ -0.67
AC239367.3-201ENST00000428996 AQRO60306 1485 aaKnown RBP eCLIP10.87□□□□□ -0.67
AC239367.3-201ENST00000428996 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
AC239367.3-201ENST00000428996 GOLGA3Q08378 1498 aa10.84□□□□□ -0.67
AC239367.3-201ENST00000428996 PRXQ9BXM0 1461 aa10.83□□□□□ -0.68
AC239367.3-201ENST00000428996 ZNF608Q9ULD9 1512 aaPredicted RBP10.83□□□□□ -0.68
AC239367.3-201ENST00000428996 GRIN2BQ13224 1484 aa10.82□□□□□ -0.68
AC239367.3-201ENST00000428996 RAPGEF2Q9Y4G8 1499 aa10.82□□□□□ -0.68
AC239367.3-201ENST00000428996 ERICH3Q5RHP9 1530 aa10.82□□□□□ -0.68
AC239367.3-201ENST00000428996 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms