RNA–Protein interactions for RNA: ENST00000428816.1

BRWD1P3-201, Transcript of bromodomain and WD repeat domain containing 1 pseudogene 3, humanhuman

BASIC

Gene BRWD1P3, Length 390 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1P3-201ENST00000428816 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
BRWD1P3-201ENST00000428816 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
BRWD1P3-201ENST00000428816 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
BRWD1P3-201ENST00000428816 PHF23Q9BUL5 403 aaPredicted RBP16.08■□□□□ 0.16
BRWD1P3-201ENST00000428816 FOXD1Q16676 465 aa15.13■□□□□ 0.01
BRWD1P3-201ENST00000428816 NISCHQ9Y2I1 1504 aa14.78□□□□□ -0.04
BRWD1P3-201ENST00000428816 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
BRWD1P3-201ENST00000428816 ABCC9O60706 1549 aa14.65□□□□□ -0.06
BRWD1P3-201ENST00000428816 PLPPR3Q6T4P5 718 aa14.63□□□□□ -0.07
BRWD1P3-201ENST00000428816 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
BRWD1P3-201ENST00000428816 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
BRWD1P3-201ENST00000428816 ADRA2BP18089 450 aa14.23□□□□□ -0.13
BRWD1P3-201ENST00000428816 PIAS4Q8N2W9 510 aaPredicted RBP14.12□□□□□ -0.15
BRWD1P3-201ENST00000428816 MSH5O43196 834 aa14.02□□□□□ -0.17
BRWD1P3-201ENST00000428816 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.22
BRWD1P3-201ENST00000428816 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
BRWD1P3-201ENST00000428816 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
BRWD1P3-201ENST00000428816 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
BRWD1P3-201ENST00000428816 CECR2Q9BXF3 1484 aa13.35□□□□□ -0.27
BRWD1P3-201ENST00000428816 NACADO15069 1562 aa13.23□□□□□ -0.29
BRWD1P3-201ENST00000428816 CC2D2AQ9P2K1 1620 aa13.2□□□□□ -0.3
BRWD1P3-201ENST00000428816 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
BRWD1P3-201ENST00000428816 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
BRWD1P3-201ENST00000428816 CUX2O14529 1486 aa13.13□□□□□ -0.31
BRWD1P3-201ENST00000428816 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
BRWD1P3-201ENST00000428816 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
BRWD1P3-201ENST00000428816 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
BRWD1P3-201ENST00000428816 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
BRWD1P3-201ENST00000428816 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
BRWD1P3-201ENST00000428816 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
BRWD1P3-201ENST00000428816 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
BRWD1P3-201ENST00000428816 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
BRWD1P3-201ENST00000428816 MYO15BQ96JP2 1530 aa12.77□□□□□ -0.37
BRWD1P3-201ENST00000428816 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
BRWD1P3-201ENST00000428816 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
BRWD1P3-201ENST00000428816 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
BRWD1P3-201ENST00000428816 SCRIBQ14160 1630 aa12.43□□□□□ -0.42
BRWD1P3-201ENST00000428816 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
BRWD1P3-201ENST00000428816 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
BRWD1P3-201ENST00000428816 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
BRWD1P3-201ENST00000428816 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
BRWD1P3-201ENST00000428816 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
BRWD1P3-201ENST00000428816 NESP48681 1621 aa12.29□□□□□ -0.44
BRWD1P3-201ENST00000428816 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
BRWD1P3-201ENST00000428816 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.45
BRWD1P3-201ENST00000428816 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
BRWD1P3-201ENST00000428816 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
BRWD1P3-201ENST00000428816 NCAPD3P42695 1498 aa12.24□□□□□ -0.45
BRWD1P3-201ENST00000428816 RIMBP3CA6NJZ7 1639 aa12.23□□□□□ -0.45
BRWD1P3-201ENST00000428816 RIMBP3BA6NNM3 1639 aa12.23□□□□□ -0.45
BRWD1P3-201ENST00000428816 RIMBP3Q9UFD9 1639 aa12.23□□□□□ -0.45
BRWD1P3-201ENST00000428816 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
BRWD1P3-201ENST00000428816 KCNA4P22459 653 aa12.18□□□□□ -0.46
BRWD1P3-201ENST00000428816 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
BRWD1P3-201ENST00000428816 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
BRWD1P3-201ENST00000428816 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
BRWD1P3-201ENST00000428816 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
BRWD1P3-201ENST00000428816 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
BRWD1P3-201ENST00000428816 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
BRWD1P3-201ENST00000428816 ZCCHC6Q5VYS8 1495 aaKnown RBP12.05□□□□□ -0.48
BRWD1P3-201ENST00000428816 HMGXB3Q12766 1538 aa12.04□□□□□ -0.48
BRWD1P3-201ENST00000428816 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
BRWD1P3-201ENST00000428816 WDR62O43379 1518 aa12.03□□□□□ -0.48
BRWD1P3-201ENST00000428816 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
BRWD1P3-201ENST00000428816 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
BRWD1P3-201ENST00000428816 ARAP1Q96P48 1450 aa11.93□□□□□ -0.5
BRWD1P3-201ENST00000428816 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
BRWD1P3-201ENST00000428816 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
BRWD1P3-201ENST00000428816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.52
BRWD1P3-201ENST00000428816 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
BRWD1P3-201ENST00000428816 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
BRWD1P3-201ENST00000428816 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
BRWD1P3-201ENST00000428816 CEP164Q9UPV0 1460 aa11.76□□□□□ -0.53
BRWD1P3-201ENST00000428816 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
BRWD1P3-201ENST00000428816 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
BRWD1P3-201ENST00000428816 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
BRWD1P3-201ENST00000428816 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
BRWD1P3-201ENST00000428816 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
BRWD1P3-201ENST00000428816 U3KPZ7 1027 aaPredicted RBP11.67□□□□□ -0.54
BRWD1P3-201ENST00000428816 LMTK3Q96Q04 1460 aa11.67□□□□□ -0.54
BRWD1P3-201ENST00000428816 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
BRWD1P3-201ENST00000428816 SOCS7O14512 581 aa11.64□□□□□ -0.55
BRWD1P3-201ENST00000428816 ERCC6L2Q5T890 1561 aa11.63□□□□□ -0.55
BRWD1P3-201ENST00000428816 ZNF608Q9ULD9 1512 aaPredicted RBP11.61□□□□□ -0.55
BRWD1P3-201ENST00000428816 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
BRWD1P3-201ENST00000428816 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
BRWD1P3-201ENST00000428816 CHD1O14646 1710 aa11.55□□□□□ -0.56
BRWD1P3-201ENST00000428816 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
BRWD1P3-201ENST00000428816 HECW2Q9P2P5 1572 aa11.5□□□□□ -0.57
BRWD1P3-201ENST00000428816 FBLN2P98095 1184 aa11.48□□□□□ -0.57
BRWD1P3-201ENST00000428816 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
BRWD1P3-201ENST00000428816 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
BRWD1P3-201ENST00000428816 ILDR2Q71H61 639 aa11.47□□□□□ -0.57
BRWD1P3-201ENST00000428816 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
BRWD1P3-201ENST00000428816 CFTRP13569 1480 aa11.45□□□□□ -0.58
BRWD1P3-201ENST00000428816 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
BRWD1P3-201ENST00000428816 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.59
BRWD1P3-201ENST00000428816 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
BRWD1P3-201ENST00000428816 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
BRWD1P3-201ENST00000428816 KIF13AQ9H1H9 1805 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms