RNA–Protein interactions for RNA: ENST00000428631.6

GRIA4-204, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best) BASIC

Gene GRIA4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-204ENST00000428631 NISCHQ9Y2I1 1504 aa12.93□□□□□ -0.34
GRIA4-204ENST00000428631 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
GRIA4-204ENST00000428631 ZCCHC6Q5VYS8 1495 aaKnown RBP10.89□□□□□ -0.67
GRIA4-204ENST00000428631 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.7
GRIA4-204ENST00000428631 SHROOM4Q9ULL8 1493 aa10.69□□□□□ -0.7
GRIA4-204ENST00000428631 DCAF1Q9Y4B6 1507 aa10.68□□□□□ -0.7
GRIA4-204ENST00000428631 POTEDQ86YR6 584 aa10.67□□□□□ -0.7
GRIA4-204ENST00000428631 ABCC9O60706 1549 aa10.51□□□□□ -0.73
GRIA4-204ENST00000428631 MYO15BQ96JP2 1530 aa10.5□□□□□ -0.73
GRIA4-204ENST00000428631 NACADO15069 1562 aa10.42□□□□□ -0.74
GRIA4-204ENST00000428631 SUPT5HO00267 1087 aaKnown RBP10.36□□□□□ -0.75
GRIA4-204ENST00000428631 SCRIBQ14160 1630 aa10.35□□□□□ -0.75
GRIA4-204ENST00000428631 RB1CC1Q8TDY2 1594 aa10.31□□□□□ -0.76
GRIA4-204ENST00000428631 AEBP2Q6ZN18 517 aaPredicted RBP10.24□□□□□ -0.77
GRIA4-204ENST00000428631 RSF1Q96T23 1441 aaPredicted RBP10.08□□□□□ -0.8
GRIA4-204ENST00000428631 UNC13AQ9UPW8 1703 aa10.06□□□□□ -0.8
GRIA4-204ENST00000428631 CECR2Q9BXF3 1484 aa10.03□□□□□ -0.8
GRIA4-204ENST00000428631 MROH2BQ7Z745 1585 aa9.99□□□□□ -0.81
GRIA4-204ENST00000428631 BAZ1AQ9NRL2 1556 aaPredicted RBP9.99□□□□□ -0.81
GRIA4-204ENST00000428631 BICRAQ9NZM4 1560 aa9.96□□□□□ -0.82
GRIA4-204ENST00000428631 CHIC1Q5VXU3 224 aa9.95□□□□□ -0.82
GRIA4-204ENST00000428631 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
GRIA4-204ENST00000428631 WIZO95785 1651 aa9.92□□□□□ -0.82
GRIA4-204ENST00000428631 SMARCA4P51532 1647 aa9.91□□□□□ -0.82
GRIA4-204ENST00000428631 TOP2AP11388 1531 aaKnown RBP9.83□□□□□ -0.84
GRIA4-204ENST00000428631 PEG3Q9GZU2 1588 aa9.76□□□□□ -0.85
GRIA4-204ENST00000428631 SMARCA2P51531 1590 aa9.73□□□□□ -0.85
GRIA4-204ENST00000428631 TRIM41Q8WV44 630 aa9.73□□□□□ -0.85
GRIA4-204ENST00000428631 CCDC88BA6NC98 1476 aa9.73□□□□□ -0.85
GRIA4-204ENST00000428631 ATAD2BQ9ULI0 1458 aa9.72□□□□□ -0.85
GRIA4-204ENST00000428631 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
GRIA4-204ENST00000428631 EIF4G1Q04637 1599 aaKnown RBP9.69□□□□□ -0.86
GRIA4-204ENST00000428631 HMGXB3Q12766 1538 aa9.61□□□□□ -0.87
GRIA4-204ENST00000428631 NCAPD3P42695 1498 aa9.61□□□□□ -0.87
GRIA4-204ENST00000428631 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
GRIA4-204ENST00000428631 ABCC8Q09428 1581 aa9.57□□□□□ -0.88
GRIA4-204ENST00000428631 FAM9AQ8IZU1 332 aaPredicted RBP9.56□□□□□ -0.88
GRIA4-204ENST00000428631 WRNQ14191 1432 aaPredicted RBP eCLIP9.51□□□□□ -0.89
GRIA4-204ENST00000428631 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
GRIA4-204ENST00000428631 EEA1Q15075 1411 aa9.45□□□□□ -0.9
GRIA4-204ENST00000428631 SYNJ1O43426 1573 aa9.44□□□□□ -0.9
GRIA4-204ENST00000428631 EHMT2Q96KQ7 1210 aa9.44□□□□□ -0.9
GRIA4-204ENST00000428631 CFTRP13569 1480 aa9.44□□□□□ -0.9
GRIA4-204ENST00000428631 SOGA1O94964 1423 aa9.42□□□□□ -0.9
GRIA4-204ENST00000428631 TOP2BQ02880 1626 aa9.39□□□□□ -0.91
GRIA4-204ENST00000428631 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
GRIA4-204ENST00000428631 PRDM2Q13029 1718 aa9.38□□□□□ -0.91
GRIA4-204ENST00000428631 CSRNP3Q8WYN3 585 aa9.38□□□□□ -0.91
GRIA4-204ENST00000428631 BIVM-ERCC5R4GMW8 1640 aa9.37□□□□□ -0.91
GRIA4-204ENST00000428631 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
GRIA4-204ENST00000428631 CUX1P39880 1505 aa9.34□□□□□ -0.91
GRIA4-204ENST00000428631 GOLGA3Q08378 1498 aa9.33□□□□□ -0.92
GRIA4-204ENST00000428631 CEP164Q9UPV0 1460 aa9.31□□□□□ -0.92
GRIA4-204ENST00000428631 TNIKQ9UKE5 1360 aa9.31□□□□□ -0.92
GRIA4-204ENST00000428631 PCGF6Q9BYE7 350 aa9.31□□□□□ -0.92
GRIA4-204ENST00000428631 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
GRIA4-204ENST00000428631 KIF21BO75037 1637 aa9.3□□□□□ -0.92
GRIA4-204ENST00000428631 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
GRIA4-204ENST00000428631 CEP162Q5TB80 1403 aa9.28□□□□□ -0.92
GRIA4-204ENST00000428631 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
GRIA4-204ENST00000428631 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.93
GRIA4-204ENST00000428631 KIF27Q86VH2 1401 aa9.27□□□□□ -0.93
GRIA4-204ENST00000428631 NESP48681 1621 aa9.25□□□□□ -0.93
GRIA4-204ENST00000428631 FGD5Q6ZNL6 1462 aa9.23□□□□□ -0.93
GRIA4-204ENST00000428631 DNMBPQ6XZF7 1577 aa9.22□□□□□ -0.93
GRIA4-204ENST00000428631 RAPGEF2Q9Y4G8 1499 aa9.22□□□□□ -0.93
GRIA4-204ENST00000428631 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
GRIA4-204ENST00000428631 PDS5BQ9NTI5 1447 aa9.21□□□□□ -0.93
GRIA4-204ENST00000428631 CUX2O14529 1486 aa9.21□□□□□ -0.94
GRIA4-204ENST00000428631 SENP3Q9H4L4 574 aaPredicted RBP9.21□□□□□ -0.94
GRIA4-204ENST00000428631 PRXQ9BXM0 1461 aa9.21□□□□□ -0.94
GRIA4-204ENST00000428631 TOPBP1Q92547 1522 aa9.2□□□□□ -0.94
GRIA4-204ENST00000428631 DNAJC5BQ9UF47 199 aa9.19□□□□□ -0.94
GRIA4-204ENST00000428631 CLIP1P30622 1438 aa9.18□□□□□ -0.94
GRIA4-204ENST00000428631 PELP1Q8IZL8 1130 aaKnown RBP9.18□□□□□ -0.94
GRIA4-204ENST00000428631 POLA1P09884 1462 aaPredicted RBP9.16□□□□□ -0.94
GRIA4-204ENST00000428631 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.94
GRIA4-204ENST00000428631 PPARGC1BQ86YN6 1023 aaKnown RBP9.14□□□□□ -0.95
GRIA4-204ENST00000428631 IGF1RP08069 1367 aa9.14□□□□□ -0.95
GRIA4-204ENST00000428631 ABCA10Q8WWZ4 1543 aa9.14□□□□□ -0.95
GRIA4-204ENST00000428631 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
GRIA4-204ENST00000428631 HRCP23327 699 aa9.13□□□□□ -0.95
GRIA4-204ENST00000428631 KIF21AQ7Z4S6 1674 aa9.13□□□□□ -0.95
GRIA4-204ENST00000428631 RANGAP1P46060 587 aaPredicted RBP9.12□□□□□ -0.95
GRIA4-204ENST00000428631 CARMIL1Q5VZK9 1371 aa9.12□□□□□ -0.95
GRIA4-204ENST00000428631 VPS8Q8N3P4 1428 aa9.11□□□□□ -0.95
GRIA4-204ENST00000428631 APLP2Q06481 763 aa9.08□□□□□ -0.96
GRIA4-204ENST00000428631 WDR97A6NE52 1622 aa9.08□□□□□ -0.96
GRIA4-204ENST00000428631 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
GRIA4-204ENST00000428631 TTBK1Q5TCY1 1321 aaPredicted RBP9.08□□□□□ -0.96
GRIA4-204ENST00000428631 CUL7Q14999 1698 aa9.07□□□□□ -0.96
GRIA4-204ENST00000428631 ARAP1Q96P48 1450 aa9.06□□□□□ -0.96
GRIA4-204ENST00000428631 TDRD9Q8NDG6 1382 aaKnown RBP9.05□□□□□ -0.96
GRIA4-204ENST00000428631 ABCA5Q8WWZ7 1642 aa9.05□□□□□ -0.96
GRIA4-204ENST00000428631 GAPVD1Q14C86 1478 aa9.05□□□□□ -0.96
GRIA4-204ENST00000428631 ERCC6Q03468 1493 aa9.03□□□□□ -0.96
GRIA4-204ENST00000428631 ARHGAP35Q9NRY4 1499 aa9.03□□□□□ -0.96
GRIA4-204ENST00000428631 TARBP1Q13395 1621 aaKnown RBP9.02□□□□□ -0.96
GRIA4-204ENST00000428631 WDR62O43379 1518 aa9.01□□□□□ -0.97
GRIA4-204ENST00000428631 IFT140Q96RY7 1462 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms