RNA–Protein interactions for RNA: ENST00000428557.1

AC006001.2-203, humanhuman

TSL 3

Gene AC006001.2, Length 304 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.2-203ENST00000428557 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
AC006001.2-203ENST00000428557 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
AC006001.2-203ENST00000428557 ABCC9O60706 1549 aa25.56■■□□□ 1.68
AC006001.2-203ENST00000428557 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
AC006001.2-203ENST00000428557 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
AC006001.2-203ENST00000428557 NACADO15069 1562 aa24.25■■□□□ 1.47
AC006001.2-203ENST00000428557 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
AC006001.2-203ENST00000428557 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
AC006001.2-203ENST00000428557 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
AC006001.2-203ENST00000428557 DCAF1Q9Y4B6 1507 aa23.81■■□□□ 1.4
AC006001.2-203ENST00000428557 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
AC006001.2-203ENST00000428557 BICRAQ9NZM4 1560 aa23.59■■□□□ 1.37
AC006001.2-203ENST00000428557 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
AC006001.2-203ENST00000428557 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
AC006001.2-203ENST00000428557 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
AC006001.2-203ENST00000428557 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
AC006001.2-203ENST00000428557 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
AC006001.2-203ENST00000428557 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
AC006001.2-203ENST00000428557 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
AC006001.2-203ENST00000428557 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
AC006001.2-203ENST00000428557 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
AC006001.2-203ENST00000428557 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
AC006001.2-203ENST00000428557 SMARCA2P51531 1590 aa22.34■■□□□ 1.17
AC006001.2-203ENST00000428557 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
AC006001.2-203ENST00000428557 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
AC006001.2-203ENST00000428557 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
AC006001.2-203ENST00000428557 PEG3Q9GZU2 1588 aa22.15■■□□□ 1.14
AC006001.2-203ENST00000428557 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
AC006001.2-203ENST00000428557 NESP48681 1621 aa22.02■■□□□ 1.11
AC006001.2-203ENST00000428557 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
AC006001.2-203ENST00000428557 WIZO95785 1651 aa21.97■■□□□ 1.11
AC006001.2-203ENST00000428557 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
AC006001.2-203ENST00000428557 CUX2O14529 1486 aa21.82■■□□□ 1.08
AC006001.2-203ENST00000428557 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
AC006001.2-203ENST00000428557 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
AC006001.2-203ENST00000428557 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
AC006001.2-203ENST00000428557 CFTRP13569 1480 aa21.61■■□□□ 1.05
AC006001.2-203ENST00000428557 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
AC006001.2-203ENST00000428557 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
AC006001.2-203ENST00000428557 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
AC006001.2-203ENST00000428557 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
AC006001.2-203ENST00000428557 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
AC006001.2-203ENST00000428557 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
AC006001.2-203ENST00000428557 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
AC006001.2-203ENST00000428557 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
AC006001.2-203ENST00000428557 WDR62O43379 1518 aa21.42■■□□□ 1.02
AC006001.2-203ENST00000428557 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
AC006001.2-203ENST00000428557 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
AC006001.2-203ENST00000428557 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
AC006001.2-203ENST00000428557 ABCC8Q09428 1581 aa21.13■□□□□ 0.97
AC006001.2-203ENST00000428557 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
AC006001.2-203ENST00000428557 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
AC006001.2-203ENST00000428557 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
AC006001.2-203ENST00000428557 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
AC006001.2-203ENST00000428557 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
AC006001.2-203ENST00000428557 SOGA1O94964 1423 aa20.95■□□□□ 0.95
AC006001.2-203ENST00000428557 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
AC006001.2-203ENST00000428557 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
AC006001.2-203ENST00000428557 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
AC006001.2-203ENST00000428557 CUX1P39880 1505 aa20.9■□□□□ 0.94
AC006001.2-203ENST00000428557 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
AC006001.2-203ENST00000428557 FBLN2P98095 1184 aa20.87■□□□□ 0.93
AC006001.2-203ENST00000428557 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
AC006001.2-203ENST00000428557 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
AC006001.2-203ENST00000428557 EIF4G3O43432 1585 aaKnown RBP20.84■□□□□ 0.93
AC006001.2-203ENST00000428557 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
AC006001.2-203ENST00000428557 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
AC006001.2-203ENST00000428557 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
AC006001.2-203ENST00000428557 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
AC006001.2-203ENST00000428557 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
AC006001.2-203ENST00000428557 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
AC006001.2-203ENST00000428557 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
AC006001.2-203ENST00000428557 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
AC006001.2-203ENST00000428557 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
AC006001.2-203ENST00000428557 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
AC006001.2-203ENST00000428557 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
AC006001.2-203ENST00000428557 CHD1O14646 1710 aa20.56■□□□□ 0.88
AC006001.2-203ENST00000428557 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
AC006001.2-203ENST00000428557 CYB5RLQ6IPT4 315 aa20.55■□□□□ 0.88
AC006001.2-203ENST00000428557 BIVM-ERCC5R4GMW8 1640 aa20.54■□□□□ 0.88
AC006001.2-203ENST00000428557 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
AC006001.2-203ENST00000428557 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
AC006001.2-203ENST00000428557 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
AC006001.2-203ENST00000428557 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
AC006001.2-203ENST00000428557 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
AC006001.2-203ENST00000428557 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
AC006001.2-203ENST00000428557 CLASP1Q7Z460 1538 aa20.41■□□□□ 0.86
AC006001.2-203ENST00000428557 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
AC006001.2-203ENST00000428557 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
AC006001.2-203ENST00000428557 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
AC006001.2-203ENST00000428557 ADAMTS12P58397 1594 aa20.35■□□□□ 0.85
AC006001.2-203ENST00000428557 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
AC006001.2-203ENST00000428557 NUP160Q12769 1436 aa20.32■□□□□ 0.84
AC006001.2-203ENST00000428557 IGF1RP08069 1367 aa20.32■□□□□ 0.84
AC006001.2-203ENST00000428557 CEP170Q5SW79 1584 aa20.26■□□□□ 0.83
AC006001.2-203ENST00000428557 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
AC006001.2-203ENST00000428557 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
AC006001.2-203ENST00000428557 CARMIL1Q5VZK9 1371 aa20.2■□□□□ 0.82
AC006001.2-203ENST00000428557 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
AC006001.2-203ENST00000428557 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms