RNA–Protein interactions for RNA: ENST00000427775.2

AL033539.1-201, humanhuman

TSL 3 BASIC

Gene AL033539.1, Length 743 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL033539.1-201ENST00000427775 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.37
AL033539.1-201ENST00000427775 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
AL033539.1-201ENST00000427775 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
AL033539.1-201ENST00000427775 PHF23Q9BUL5 403 aaPredicted RBP19.88■□□□□ 0.77
AL033539.1-201ENST00000427775 FOXD1Q16676 465 aa18.99■□□□□ 0.63
AL033539.1-201ENST00000427775 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
AL033539.1-201ENST00000427775 MSH5O43196 834 aa18.05■□□□□ 0.48
AL033539.1-201ENST00000427775 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
AL033539.1-201ENST00000427775 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
AL033539.1-201ENST00000427775 ADRA2BP18089 450 aa17.04■□□□□ 0.32
AL033539.1-201ENST00000427775 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
AL033539.1-201ENST00000427775 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
AL033539.1-201ENST00000427775 CACNB1Q02641 598 aaPredicted RBP15.91■□□□□ 0.14
AL033539.1-201ENST00000427775 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
AL033539.1-201ENST00000427775 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
AL033539.1-201ENST00000427775 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
AL033539.1-201ENST00000427775 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
AL033539.1-201ENST00000427775 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
AL033539.1-201ENST00000427775 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
AL033539.1-201ENST00000427775 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
AL033539.1-201ENST00000427775 RNF216Q9NWF9 866 aaPredicted RBP14.76□□□□□ -0.05
AL033539.1-201ENST00000427775 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
AL033539.1-201ENST00000427775 CNKSR2Q8WXI2 1034 aa14.7□□□□□ -0.06
AL033539.1-201ENST00000427775 POTEHQ6S545 545 aa14.66□□□□□ -0.06
AL033539.1-201ENST00000427775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
AL033539.1-201ENST00000427775 DSG3P32926 999 aa14.11□□□□□ -0.15
AL033539.1-201ENST00000427775 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
AL033539.1-201ENST00000427775 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
AL033539.1-201ENST00000427775 CAPN15O75808 1086 aa13.96□□□□□ -0.17
AL033539.1-201ENST00000427775 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
AL033539.1-201ENST00000427775 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
AL033539.1-201ENST00000427775 ABCB7O75027 752 aa13.58□□□□□ -0.24
AL033539.1-201ENST00000427775 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
AL033539.1-201ENST00000427775 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
AL033539.1-201ENST00000427775 APLP2Q06481 763 aa13.48□□□□□ -0.25
AL033539.1-201ENST00000427775 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
AL033539.1-201ENST00000427775 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
AL033539.1-201ENST00000427775 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
AL033539.1-201ENST00000427775 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
AL033539.1-201ENST00000427775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
AL033539.1-201ENST00000427775 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
AL033539.1-201ENST00000427775 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
AL033539.1-201ENST00000427775 POLA2Q14181 598 aa13.03□□□□□ -0.32
AL033539.1-201ENST00000427775 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
AL033539.1-201ENST00000427775 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
AL033539.1-201ENST00000427775 HAX1O00165 279 aa12.92□□□□□ -0.34
AL033539.1-201ENST00000427775 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
AL033539.1-201ENST00000427775 KCNA4P22459 653 aa12.85□□□□□ -0.35
AL033539.1-201ENST00000427775 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
AL033539.1-201ENST00000427775 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
AL033539.1-201ENST00000427775 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
AL033539.1-201ENST00000427775 EVX2Q03828 476 aa12.75□□□□□ -0.37
AL033539.1-201ENST00000427775 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
AL033539.1-201ENST00000427775 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
AL033539.1-201ENST00000427775 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
AL033539.1-201ENST00000427775 LHX8Q68G74 356 aa12.53□□□□□ -0.4
AL033539.1-201ENST00000427775 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
AL033539.1-201ENST00000427775 GABBR2O75899 941 aa12.41□□□□□ -0.42
AL033539.1-201ENST00000427775 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
AL033539.1-201ENST00000427775 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
AL033539.1-201ENST00000427775 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
AL033539.1-201ENST00000427775 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
AL033539.1-201ENST00000427775 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
AL033539.1-201ENST00000427775 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
AL033539.1-201ENST00000427775 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
AL033539.1-201ENST00000427775 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
AL033539.1-201ENST00000427775 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
AL033539.1-201ENST00000427775 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
AL033539.1-201ENST00000427775 FBLN2P98095 1184 aa12.07□□□□□ -0.48
AL033539.1-201ENST00000427775 SSUH2Q9Y2M2 353 aa12.06□□□□□ -0.48
AL033539.1-201ENST00000427775 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
AL033539.1-201ENST00000427775 CLCN6P51797 869 aa11.98□□□□□ -0.49
AL033539.1-201ENST00000427775 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
AL033539.1-201ENST00000427775 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
AL033539.1-201ENST00000427775 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
AL033539.1-201ENST00000427775 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
AL033539.1-201ENST00000427775 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
AL033539.1-201ENST00000427775 DCBLD2Q96PD2 775 aa11.88□□□□□ -0.51
AL033539.1-201ENST00000427775 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
AL033539.1-201ENST00000427775 FARP1Q9Y4F1 1045 aaPredicted RBP11.85□□□□□ -0.51
AL033539.1-201ENST00000427775 POTEMA6NI47 508 aa11.84□□□□□ -0.51
AL033539.1-201ENST00000427775 ZBTB22O15209 634 aa11.83□□□□□ -0.52
AL033539.1-201ENST00000427775 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
AL033539.1-201ENST00000427775 POTEGQ6S5H5 508 aa11.78□□□□□ -0.52
AL033539.1-201ENST00000427775 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
AL033539.1-201ENST00000427775 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
AL033539.1-201ENST00000427775 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
AL033539.1-201ENST00000427775 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
AL033539.1-201ENST00000427775 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
AL033539.1-201ENST00000427775 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
AL033539.1-201ENST00000427775 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
AL033539.1-201ENST00000427775 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
AL033539.1-201ENST00000427775 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
AL033539.1-201ENST00000427775 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
AL033539.1-201ENST00000427775 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
AL033539.1-201ENST00000427775 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
AL033539.1-201ENST00000427775 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
AL033539.1-201ENST00000427775 ASTLQ6HA08 431 aaPredicted RBP11.4□□□□□ -0.58
AL033539.1-201ENST00000427775 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
AL033539.1-201ENST00000427775 MAMSTRQ6ZN01 415 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms