RNA–Protein interactions for RNA: ENST00000427658.1

AFG3L1P-208, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, humanhuman

TSL 2

Gene AFG3L1P, Length 2,758 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFG3L1P-208ENST00000427658 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
AFG3L1P-208ENST00000427658 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
AFG3L1P-208ENST00000427658 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.49
AFG3L1P-208ENST00000427658 HRCP23327 699 aa17.9■□□□□ 0.46
AFG3L1P-208ENST00000427658 ZCCHC6Q5VYS8 1495 aaKnown RBP17.67■□□□□ 0.42
AFG3L1P-208ENST00000427658 MYT1Q01538 1121 aa17.54■□□□□ 0.4
AFG3L1P-208ENST00000427658 PPARGC1BQ86YN6 1023 aaKnown RBP17.54■□□□□ 0.4
AFG3L1P-208ENST00000427658 DCAF1Q9Y4B6 1507 aa17.51■□□□□ 0.39
AFG3L1P-208ENST00000427658 ABCC9O60706 1549 aa17.49■□□□□ 0.39
AFG3L1P-208ENST00000427658 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.38
AFG3L1P-208ENST00000427658 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
AFG3L1P-208ENST00000427658 NACADO15069 1562 aa17.28■□□□□ 0.36
AFG3L1P-208ENST00000427658 PCGF6Q9BYE7 350 aa17.27■□□□□ 0.35
AFG3L1P-208ENST00000427658 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
AFG3L1P-208ENST00000427658 DCAF8L2P0C7V8 631 aa17.09■□□□□ 0.33
AFG3L1P-208ENST00000427658 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
AFG3L1P-208ENST00000427658 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
AFG3L1P-208ENST00000427658 SHROOM4Q9ULL8 1493 aa16.76■□□□□ 0.27
AFG3L1P-208ENST00000427658 BICRAQ9NZM4 1560 aa16.66■□□□□ 0.26
AFG3L1P-208ENST00000427658 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
AFG3L1P-208ENST00000427658 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
AFG3L1P-208ENST00000427658 SUPT5HO00267 1087 aaKnown RBP16.61■□□□□ 0.25
AFG3L1P-208ENST00000427658 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
AFG3L1P-208ENST00000427658 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
AFG3L1P-208ENST00000427658 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
AFG3L1P-208ENST00000427658 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
AFG3L1P-208ENST00000427658 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.24
AFG3L1P-208ENST00000427658 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
AFG3L1P-208ENST00000427658 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
AFG3L1P-208ENST00000427658 CENPBP07199 599 aaPredicted RBP16.32■□□□□ 0.2
AFG3L1P-208ENST00000427658 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
AFG3L1P-208ENST00000427658 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
AFG3L1P-208ENST00000427658 FAM9AQ8IZU1 332 aaPredicted RBP16.27■□□□□ 0.2
AFG3L1P-208ENST00000427658 BAZ1AQ9NRL2 1556 aaPredicted RBP16.27■□□□□ 0.2
AFG3L1P-208ENST00000427658 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
AFG3L1P-208ENST00000427658 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.19
AFG3L1P-208ENST00000427658 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
AFG3L1P-208ENST00000427658 PRKCSHP14314 528 aaPredicted RBP16.18■□□□□ 0.18
AFG3L1P-208ENST00000427658 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
AFG3L1P-208ENST00000427658 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
AFG3L1P-208ENST00000427658 WIZO95785 1651 aa16.08■□□□□ 0.17
AFG3L1P-208ENST00000427658 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
AFG3L1P-208ENST00000427658 ANP32EQ9BTT0 268 aa16.02■□□□□ 0.15
AFG3L1P-208ENST00000427658 SMARCA2P51531 1590 aa16■□□□□ 0.15
AFG3L1P-208ENST00000427658 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
AFG3L1P-208ENST00000427658 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
AFG3L1P-208ENST00000427658 CC2D2AQ9P2K1 1620 aa15.93■□□□□ 0.14
AFG3L1P-208ENST00000427658 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
AFG3L1P-208ENST00000427658 NCAPD3P42695 1498 aa15.9■□□□□ 0.14
AFG3L1P-208ENST00000427658 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
AFG3L1P-208ENST00000427658 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
AFG3L1P-208ENST00000427658 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
AFG3L1P-208ENST00000427658 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
AFG3L1P-208ENST00000427658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
AFG3L1P-208ENST00000427658 ERICH6Q7L0X2 663 aa15.76■□□□□ 0.11
AFG3L1P-208ENST00000427658 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
AFG3L1P-208ENST00000427658 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
AFG3L1P-208ENST00000427658 TSHZ2Q9NRE2 1034 aa15.72■□□□□ 0.11
AFG3L1P-208ENST00000427658 CCDC88BA6NC98 1476 aa15.72■□□□□ 0.11
AFG3L1P-208ENST00000427658 APLP2Q06481 763 aa15.64■□□□□ 0.09
AFG3L1P-208ENST00000427658 MIER1Q8N108 512 aa15.61■□□□□ 0.09
AFG3L1P-208ENST00000427658 SUPT16HQ9Y5B9 1047 aaKnown RBP15.61■□□□□ 0.09
AFG3L1P-208ENST00000427658 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
AFG3L1P-208ENST00000427658 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
AFG3L1P-208ENST00000427658 CFTRP13569 1480 aa15.48■□□□□ 0.07
AFG3L1P-208ENST00000427658 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
AFG3L1P-208ENST00000427658 LAMC3Q9Y6N6 1575 aa15.43■□□□□ 0.06
AFG3L1P-208ENST00000427658 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
AFG3L1P-208ENST00000427658 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
AFG3L1P-208ENST00000427658 ANO8Q9HCE9 1232 aaPredicted RBP15.36■□□□□ 0.05
AFG3L1P-208ENST00000427658 NESP48681 1621 aa15.31■□□□□ 0.04
AFG3L1P-208ENST00000427658 RBM19Q9Y4C8 960 aaKnown RBP15.29■□□□□ 0.04
AFG3L1P-208ENST00000427658 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
AFG3L1P-208ENST00000427658 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
AFG3L1P-208ENST00000427658 KIF21AQ7Z4S6 1674 aa15.26■□□□□ 0.03
AFG3L1P-208ENST00000427658 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
AFG3L1P-208ENST00000427658 MSH5O43196 834 aa15.24■□□□□ 0.03
AFG3L1P-208ENST00000427658 SYNJ1O43426 1573 aa15.23■□□□□ 0.03
AFG3L1P-208ENST00000427658 TOP2BQ02880 1626 aa15.23■□□□□ 0.03
AFG3L1P-208ENST00000427658 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
AFG3L1P-208ENST00000427658 PDS5BQ9NTI5 1447 aa15.22■□□□□ 0.03
AFG3L1P-208ENST00000427658 BCANQ96GW7 911 aa15.2■□□□□ 0.02
AFG3L1P-208ENST00000427658 CUX1P39880 1505 aa15.19■□□□□ 0.02
AFG3L1P-208ENST00000427658 CEP164Q9UPV0 1460 aa15.19■□□□□ 0.02
AFG3L1P-208ENST00000427658 DNMBPQ6XZF7 1577 aa15.16■□□□□ 0.02
AFG3L1P-208ENST00000427658 CUX2O14529 1486 aa15.12■□□□□ 0.01
AFG3L1P-208ENST00000427658 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
AFG3L1P-208ENST00000427658 DEKP35659 375 aaKnown RBP15.11■□□□□ 0.01
AFG3L1P-208ENST00000427658 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
AFG3L1P-208ENST00000427658 TOPBP1Q92547 1522 aa15.1■□□□□ 0.01
AFG3L1P-208ENST00000427658 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
AFG3L1P-208ENST00000427658 MRC2Q9UBG0 1479 aa15.08■□□□□ 0
AFG3L1P-208ENST00000427658 FKBP8Q14318 412 aa15.07■□□□□ 0
AFG3L1P-208ENST00000427658 WDR62O43379 1518 aa15.07■□□□□ 0
AFG3L1P-208ENST00000427658 MYT1LQ9UL68 1186 aa15.05■□□□□ -0
AFG3L1P-208ENST00000427658 UBE2Q2Q8WVN8 375 aa15.04■□□□□ -0
AFG3L1P-208ENST00000427658 CCDC136Q96JN2 1154 aa15.04■□□□□ -0
AFG3L1P-208ENST00000427658 FGD5Q6ZNL6 1462 aa15.02■□□□□ -0
AFG3L1P-208ENST00000427658 WDR97A6NE52 1622 aa15.02□□□□□ -0.01
AFG3L1P-208ENST00000427658 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms