RNA–Protein interactions for RNA: ENST00000426820.6

HIPK1-208, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK1, Length 4,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-208ENST00000426820 NISCHQ9Y2I1 1504 aa17.65■□□□□ 0.42
HIPK1-208ENST00000426820 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
HIPK1-208ENST00000426820 ABCC9O60706 1549 aa15.75■□□□□ 0.11
HIPK1-208ENST00000426820 CCDC180Q9P1Z9 1646 aa15.23■□□□□ 0.03
HIPK1-208ENST00000426820 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0.01
HIPK1-208ENST00000426820 SHROOM4Q9ULL8 1493 aa15.07■□□□□ 0
HIPK1-208ENST00000426820 RB1CC1Q8TDY2 1594 aa14.82□□□□□ -0.04
HIPK1-208ENST00000426820 NACADO15069 1562 aa14.68□□□□□ -0.06
HIPK1-208ENST00000426820 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
HIPK1-208ENST00000426820 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
HIPK1-208ENST00000426820 SCRIBQ14160 1630 aa14.5□□□□□ -0.09
HIPK1-208ENST00000426820 DCAF1Q9Y4B6 1507 aa14.28□□□□□ -0.12
HIPK1-208ENST00000426820 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
HIPK1-208ENST00000426820 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
HIPK1-208ENST00000426820 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
HIPK1-208ENST00000426820 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
HIPK1-208ENST00000426820 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
HIPK1-208ENST00000426820 FAM9AQ8IZU1 332 aaPredicted RBP13.81□□□□□ -0.2
HIPK1-208ENST00000426820 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
HIPK1-208ENST00000426820 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
HIPK1-208ENST00000426820 FBLN2P98095 1184 aa13.78□□□□□ -0.2
HIPK1-208ENST00000426820 BICRAQ9NZM4 1560 aa13.77□□□□□ -0.21
HIPK1-208ENST00000426820 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
HIPK1-208ENST00000426820 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
HIPK1-208ENST00000426820 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.21
HIPK1-208ENST00000426820 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
HIPK1-208ENST00000426820 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
HIPK1-208ENST00000426820 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
HIPK1-208ENST00000426820 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
HIPK1-208ENST00000426820 MROH2BQ7Z745 1585 aa13.61□□□□□ -0.23
HIPK1-208ENST00000426820 UNC13AQ9UPW8 1703 aa13.6□□□□□ -0.23
HIPK1-208ENST00000426820 NCAPD3P42695 1498 aa13.59□□□□□ -0.23
HIPK1-208ENST00000426820 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.24
HIPK1-208ENST00000426820 RANGAP1P46060 587 aaPredicted RBP13.56□□□□□ -0.24
HIPK1-208ENST00000426820 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
HIPK1-208ENST00000426820 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
HIPK1-208ENST00000426820 CHMP7Q8WUX9 453 aaPredicted RBP13.46□□□□□ -0.25
HIPK1-208ENST00000426820 ATP1B4Q9UN42 357 aaPredicted RBP13.44□□□□□ -0.26
HIPK1-208ENST00000426820 UBTFP17480 764 aaKnown RBP13.43□□□□□ -0.26
HIPK1-208ENST00000426820 WIZO95785 1651 aa13.39□□□□□ -0.27
HIPK1-208ENST00000426820 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
HIPK1-208ENST00000426820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.37□□□□□ -0.27
HIPK1-208ENST00000426820 HNRNPUL2Q1KMD3 747 aaKnown RBP13.37□□□□□ -0.27
HIPK1-208ENST00000426820 NESP48681 1621 aa13.36□□□□□ -0.27
HIPK1-208ENST00000426820 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
HIPK1-208ENST00000426820 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
HIPK1-208ENST00000426820 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
HIPK1-208ENST00000426820 TOP2AP11388 1531 aaKnown RBP13.32□□□□□ -0.28
HIPK1-208ENST00000426820 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
HIPK1-208ENST00000426820 APLP2Q06481 763 aa13.29□□□□□ -0.28
HIPK1-208ENST00000426820 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
HIPK1-208ENST00000426820 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
HIPK1-208ENST00000426820 SOGA1O94964 1423 aa13.2□□□□□ -0.3
HIPK1-208ENST00000426820 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
HIPK1-208ENST00000426820 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
HIPK1-208ENST00000426820 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
HIPK1-208ENST00000426820 ABCC8Q09428 1581 aa13.17□□□□□ -0.3
HIPK1-208ENST00000426820 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
HIPK1-208ENST00000426820 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
HIPK1-208ENST00000426820 CFTRP13569 1480 aa13.15□□□□□ -0.31
HIPK1-208ENST00000426820 CHIC1Q5VXU3 224 aa13.11□□□□□ -0.31
HIPK1-208ENST00000426820 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
HIPK1-208ENST00000426820 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
HIPK1-208ENST00000426820 P3H3Q8IVL6 736 aa13.08□□□□□ -0.31
HIPK1-208ENST00000426820 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
HIPK1-208ENST00000426820 CUX2O14529 1486 aa13.07□□□□□ -0.32
HIPK1-208ENST00000426820 ARID3CA6NKF2 412 aa13.06□□□□□ -0.32
HIPK1-208ENST00000426820 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
HIPK1-208ENST00000426820 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.333e-7■■■■□ 26.6
HIPK1-208ENST00000426820 IFT140Q96RY7 1462 aa13□□□□□ -0.33
HIPK1-208ENST00000426820 RAD54L2Q9Y4B4 1467 aa12.97□□□□□ -0.33
HIPK1-208ENST00000426820 FGD5Q6ZNL6 1462 aa12.96□□□□□ -0.34
HIPK1-208ENST00000426820 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
HIPK1-208ENST00000426820 CARMIL1Q5VZK9 1371 aa12.92□□□□□ -0.34
HIPK1-208ENST00000426820 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
HIPK1-208ENST00000426820 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
HIPK1-208ENST00000426820 CDK11AQ9UQ88 783 aaPredicted RBP12.9□□□□□ -0.34
HIPK1-208ENST00000426820 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.35
HIPK1-208ENST00000426820 KCNH8Q96L42 1107 aa12.89□□□□□ -0.35
HIPK1-208ENST00000426820 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
HIPK1-208ENST00000426820 GRIN2BQ13224 1484 aa12.86□□□□□ -0.35
HIPK1-208ENST00000426820 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
HIPK1-208ENST00000426820 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
HIPK1-208ENST00000426820 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
HIPK1-208ENST00000426820 LOC105371045A0A1W2PR82 267 aa12.81□□□□□ -0.36
HIPK1-208ENST00000426820 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
HIPK1-208ENST00000426820 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
HIPK1-208ENST00000426820 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
HIPK1-208ENST00000426820 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
HIPK1-208ENST00000426820 EEA1Q15075 1411 aa12.76□□□□□ -0.37
HIPK1-208ENST00000426820 ESF1Q9H501 851 aaKnown RBP12.75□□□□□ -0.37
HIPK1-208ENST00000426820 ZNF777Q9ULD5 760 aaPredicted RBP12.75□□□□□ -0.37
HIPK1-208ENST00000426820 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
HIPK1-208ENST00000426820 WDR62O43379 1518 aa12.74□□□□□ -0.37
HIPK1-208ENST00000426820 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
HIPK1-208ENST00000426820 CUX1P39880 1505 aa12.74□□□□□ -0.37
HIPK1-208ENST00000426820 PTPRGP23470 1445 aa12.71□□□□□ -0.37
HIPK1-208ENST00000426820 AEBP2Q6ZN18 517 aaPredicted RBP12.71□□□□□ -0.38
HIPK1-208ENST00000426820 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
HIPK1-208ENST00000426820 IGF1RP08069 1367 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms