RNA–Protein interactions for RNA: ENST00000426455.5

STAG3-206, Transcript of stromal antigen 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene STAG3, Length 4,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3-206ENST00000426455 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
STAG3-206ENST00000426455 MYT1Q01538 1121 aa21.68■■□□□ 1.06
STAG3-206ENST00000426455 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
STAG3-206ENST00000426455 HRCP23327 699 aa21.55■■□□□ 1.04
STAG3-206ENST00000426455 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
STAG3-206ENST00000426455 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
STAG3-206ENST00000426455 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
STAG3-206ENST00000426455 SHROOM4Q9ULL8 1493 aa21.03■□□□□ 0.96
STAG3-206ENST00000426455 CENPBP07199 599 aaPredicted RBP20.91■□□□□ 0.94
STAG3-206ENST00000426455 ZEB1P37275 1124 aaPredicted RBP20.88■□□□□ 0.93
STAG3-206ENST00000426455 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
STAG3-206ENST00000426455 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.87
STAG3-206ENST00000426455 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
STAG3-206ENST00000426455 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
STAG3-206ENST00000426455 YTHDC1Q96MU7 727 aaKnown RBP20.4■□□□□ 0.86
STAG3-206ENST00000426455 GTF3C3Q9Y5Q9 886 aa20.37■□□□□ 0.85
STAG3-206ENST00000426455 CCER1Q8TC90 406 aaPredicted RBP20.34■□□□□ 0.85
STAG3-206ENST00000426455 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
STAG3-206ENST00000426455 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
STAG3-206ENST00000426455 LOC105371045A0A1W2PR82 267 aa20.19■□□□□ 0.82
STAG3-206ENST00000426455 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
STAG3-206ENST00000426455 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
STAG3-206ENST00000426455 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
STAG3-206ENST00000426455 DIEXFQ68CQ4 756 aaKnown RBP20.04■□□□□ 0.8
STAG3-206ENST00000426455 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
STAG3-206ENST00000426455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
STAG3-206ENST00000426455 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
STAG3-206ENST00000426455 NEFLP07196 543 aa19.67■□□□□ 0.74
STAG3-206ENST00000426455 BCL11AQ9H165 835 aa19.57■□□□□ 0.72
STAG3-206ENST00000426455 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
STAG3-206ENST00000426455 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
STAG3-206ENST00000426455 APLP2Q06481 763 aa19.45■□□□□ 0.7
STAG3-206ENST00000426455 ZNF316A6NFI3 1004 aaPredicted RBP19.42■□□□□ 0.7
STAG3-206ENST00000426455 BCANQ96GW7 911 aa19.42■□□□□ 0.7
STAG3-206ENST00000426455 ANP32EQ9BTT0 268 aa19.41■□□□□ 0.7
STAG3-206ENST00000426455 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
STAG3-206ENST00000426455 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
STAG3-206ENST00000426455 MIER1Q8N108 512 aa19.13■□□□□ 0.65
STAG3-206ENST00000426455 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
STAG3-206ENST00000426455 RTL5Q5HYW3 569 aaPredicted RBP19.11■□□□□ 0.65
STAG3-206ENST00000426455 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
STAG3-206ENST00000426455 CSRNP3Q8WYN3 585 aa19.04■□□□□ 0.64
STAG3-206ENST00000426455 RANGAP1P46060 587 aaPredicted RBP19.02■□□□□ 0.64
STAG3-206ENST00000426455 FKBP8Q14318 412 aa18.99■□□□□ 0.63
STAG3-206ENST00000426455 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
STAG3-206ENST00000426455 SUPT16HQ9Y5B9 1047 aaKnown RBP18.91■□□□□ 0.62
STAG3-206ENST00000426455 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
STAG3-206ENST00000426455 EIF5BO60841 1220 aaKnown RBP18.86■□□□□ 0.61
STAG3-206ENST00000426455 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
STAG3-206ENST00000426455 ITGAEP38570 1179 aa18.77■□□□□ 0.6
STAG3-206ENST00000426455 NBR1Q14596 966 aa18.75■□□□□ 0.59
STAG3-206ENST00000426455 PRKCSHP14314 528 aaPredicted RBP18.74■□□□□ 0.59
STAG3-206ENST00000426455 DAXXQ9UER7 740 aaPredicted RBP18.68■□□□□ 0.58
STAG3-206ENST00000426455 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.57
STAG3-206ENST00000426455 ANP32CO43423 234 aa18.59■□□□□ 0.57
STAG3-206ENST00000426455 DEKP35659 375 aaKnown RBP18.58■□□□□ 0.56
STAG3-206ENST00000426455 ANP32AP39687 249 aaKnown RBP18.57■□□□□ 0.56
STAG3-206ENST00000426455 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
STAG3-206ENST00000426455 RTN4Q9NQC3 1192 aaKnown RBP18.54■□□□□ 0.56
STAG3-206ENST00000426455 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
STAG3-206ENST00000426455 DDX10Q13206 875 aaKnown RBP18.45■□□□□ 0.54
STAG3-206ENST00000426455 GLIPR1L2Q4G1C9 344 aa18.43■□□□□ 0.54
STAG3-206ENST00000426455 ZBTB47Q9UFB7 747 aaPredicted RBP18.42■□□□□ 0.54
STAG3-206ENST00000426455 CNGB1Q14028 1251 aaPredicted RBP18.41■□□□□ 0.54
STAG3-206ENST00000426455 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
STAG3-206ENST00000426455 ATP1B4Q9UN42 357 aaPredicted RBP18.39■□□□□ 0.53
STAG3-206ENST00000426455 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
STAG3-206ENST00000426455 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.35■□□□□ 0.53
STAG3-206ENST00000426455 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
STAG3-206ENST00000426455 ANO8Q9HCE9 1232 aaPredicted RBP18.28■□□□□ 0.52
STAG3-206ENST00000426455 NOP58Q9Y2X3 529 aaKnown RBP18.28■□□□□ 0.52
STAG3-206ENST00000426455 POLR3GLQ9BT43 218 aa18.26■□□□□ 0.51
STAG3-206ENST00000426455 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
STAG3-206ENST00000426455 NEFMP07197 916 aa18.13■□□□□ 0.49
STAG3-206ENST00000426455 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
STAG3-206ENST00000426455 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
STAG3-206ENST00000426455 FAM50AQ14320 339 aaKnown RBP18.08■□□□□ 0.48
STAG3-206ENST00000426455 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.48
STAG3-206ENST00000426455 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.48
STAG3-206ENST00000426455 FAM9BQ8IZU0 186 aa18.07■□□□□ 0.48
STAG3-206ENST00000426455 SALL2Q9Y467 1007 aaPredicted RBP18.06■□□□□ 0.48
STAG3-206ENST00000426455 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
STAG3-206ENST00000426455 B4GALNT3Q6L9W6 998 aa18.05■□□□□ 0.48
STAG3-206ENST00000426455 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
STAG3-206ENST00000426455 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
STAG3-206ENST00000426455 PPM1GO15355 546 aaPredicted RBP17.97■□□□□ 0.47
STAG3-206ENST00000426455 ARXQ96QS3 562 aa17.94■□□□□ 0.46
STAG3-206ENST00000426455 MSH5O43196 834 aa17.89■□□□□ 0.45
STAG3-206ENST00000426455 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
STAG3-206ENST00000426455 IL27Q8NEV9 243 aa17.86■□□□□ 0.45
STAG3-206ENST00000426455 NAP1L5Q96NT1 182 aaPredicted RBP17.85■□□□□ 0.45
STAG3-206ENST00000426455 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
STAG3-206ENST00000426455 IPO9Q96P70 1041 aaKnown RBP17.84■□□□□ 0.45
STAG3-206ENST00000426455 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
STAG3-206ENST00000426455 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
STAG3-206ENST00000426455 VSIG10Q8N0Z9 540 aa17.77■□□□□ 0.44
STAG3-206ENST00000426455 PKNOX2Q96KN3 472 aa17.77■□□□□ 0.43
STAG3-206ENST00000426455 TNIKQ9UKE5 1360 aa17.76■□□□□ 0.43
STAG3-206ENST00000426455 TIMELESSQ9UNS1 1208 aa17.76■□□□□ 0.43
STAG3-206ENST00000426455 CLIP1P30622 1438 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms