RNA–Protein interactions for RNA: ENST00000425888.1

WDR53-202, Transcript of WD repeat domain 53, humanhuman

TSL 2

Gene WDR53, Length 980 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR53-202ENST00000425888 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.28
WDR53-202ENST00000425888 CCDC180Q9P1Z9 1646 aa31.66■■■□□ 2.66
WDR53-202ENST00000425888 ABCC9O60706 1549 aa31.35■■■□□ 2.61
WDR53-202ENST00000425888 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
WDR53-202ENST00000425888 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
WDR53-202ENST00000425888 NACADO15069 1562 aa29.86■■■□□ 2.37
WDR53-202ENST00000425888 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
WDR53-202ENST00000425888 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
WDR53-202ENST00000425888 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
WDR53-202ENST00000425888 PABPN1Q86U42 306 aaKnown RBP eCLIP29.31■■■□□ 2.28
WDR53-202ENST00000425888 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
WDR53-202ENST00000425888 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
WDR53-202ENST00000425888 DNAJC5BQ9UF47 199 aa29.04■■■□□ 2.24
WDR53-202ENST00000425888 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
WDR53-202ENST00000425888 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
WDR53-202ENST00000425888 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
WDR53-202ENST00000425888 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
WDR53-202ENST00000425888 CECR2Q9BXF3 1484 aa28.16■■■□□ 2.1
WDR53-202ENST00000425888 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
WDR53-202ENST00000425888 NCAPD3P42695 1498 aa27.58■■■□□ 2.01
WDR53-202ENST00000425888 ATAD2BQ9ULI0 1458 aa27.58■■■□□ 2.01
WDR53-202ENST00000425888 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
WDR53-202ENST00000425888 SMARCA2P51531 1590 aa27.5■■□□□ 1.99
WDR53-202ENST00000425888 MROH2BQ7Z745 1585 aa27.43■■□□□ 1.98
WDR53-202ENST00000425888 HMGXB3Q12766 1538 aa27.39■■□□□ 1.98
WDR53-202ENST00000425888 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
WDR53-202ENST00000425888 PEG3Q9GZU2 1588 aa27.34■■□□□ 1.97
WDR53-202ENST00000425888 WIZO95785 1651 aa27.13■■□□□ 1.93
WDR53-202ENST00000425888 NESP48681 1621 aa27.05■■□□□ 1.92
WDR53-202ENST00000425888 RSF1Q96T23 1441 aaPredicted RBP27.03■■□□□ 1.92
WDR53-202ENST00000425888 ERCC6Q03468 1493 aa27.02■■□□□ 1.92
WDR53-202ENST00000425888 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
WDR53-202ENST00000425888 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
WDR53-202ENST00000425888 TOP2AP11388 1531 aaKnown RBP26.79■■□□□ 1.88
WDR53-202ENST00000425888 CUX2O14529 1486 aa26.77■■□□□ 1.88
WDR53-202ENST00000425888 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
WDR53-202ENST00000425888 KIF21AQ7Z4S6 1674 aa26.68■■□□□ 1.86
WDR53-202ENST00000425888 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
WDR53-202ENST00000425888 CFTRP13569 1480 aa26.55■■□□□ 1.84
WDR53-202ENST00000425888 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
WDR53-202ENST00000425888 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
WDR53-202ENST00000425888 MRC2Q9UBG0 1479 aa26.47■■□□□ 1.83
WDR53-202ENST00000425888 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
WDR53-202ENST00000425888 WDR62O43379 1518 aa26.37■■□□□ 1.81
WDR53-202ENST00000425888 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
WDR53-202ENST00000425888 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
WDR53-202ENST00000425888 SUPT5HO00267 1087 aaKnown RBP26.27■■□□□ 1.8
WDR53-202ENST00000425888 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
WDR53-202ENST00000425888 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
WDR53-202ENST00000425888 ABCC8Q09428 1581 aa25.98■■□□□ 1.75
WDR53-202ENST00000425888 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.74
WDR53-202ENST00000425888 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
WDR53-202ENST00000425888 ZNF608Q9ULD9 1512 aaPredicted RBP25.85■■□□□ 1.73
WDR53-202ENST00000425888 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
WDR53-202ENST00000425888 CUX1P39880 1505 aa25.74■■□□□ 1.71
WDR53-202ENST00000425888 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
WDR53-202ENST00000425888 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
WDR53-202ENST00000425888 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
WDR53-202ENST00000425888 SOGA1O94964 1423 aa25.71■■□□□ 1.71
WDR53-202ENST00000425888 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.7
WDR53-202ENST00000425888 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
WDR53-202ENST00000425888 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
WDR53-202ENST00000425888 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
WDR53-202ENST00000425888 WRNQ14191 1432 aaPredicted RBP eCLIP25.5■■□□□ 1.67
WDR53-202ENST00000425888 FBLN2P98095 1184 aa25.49■■□□□ 1.67
WDR53-202ENST00000425888 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
WDR53-202ENST00000425888 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
WDR53-202ENST00000425888 CHD1O14646 1710 aa25.43■■□□□ 1.66
WDR53-202ENST00000425888 SNAPC4Q5SXM2 1469 aa25.42■■□□□ 1.66
WDR53-202ENST00000425888 TOP2BQ02880 1626 aa25.42■■□□□ 1.66
WDR53-202ENST00000425888 BIVM-ERCC5R4GMW8 1640 aa25.41■■□□□ 1.66
WDR53-202ENST00000425888 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
WDR53-202ENST00000425888 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
WDR53-202ENST00000425888 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
WDR53-202ENST00000425888 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
WDR53-202ENST00000425888 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
WDR53-202ENST00000425888 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
WDR53-202ENST00000425888 ABCA5Q8WWZ7 1642 aa25.32■■□□□ 1.64
WDR53-202ENST00000425888 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
WDR53-202ENST00000425888 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
WDR53-202ENST00000425888 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
WDR53-202ENST00000425888 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
WDR53-202ENST00000425888 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
WDR53-202ENST00000425888 ARHGEF11O15085 1522 aa25.23■■□□□ 1.63
WDR53-202ENST00000425888 CLASP1Q7Z460 1538 aa25.13■■□□□ 1.61
WDR53-202ENST00000425888 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
WDR53-202ENST00000425888 CYB5RLQ6IPT4 315 aa25.1■■□□□ 1.61
WDR53-202ENST00000425888 ERICH3Q5RHP9 1530 aa25.09■■□□□ 1.61
WDR53-202ENST00000425888 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
WDR53-202ENST00000425888 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
WDR53-202ENST00000425888 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
WDR53-202ENST00000425888 KIF27Q86VH2 1401 aa24.98■■□□□ 1.59
WDR53-202ENST00000425888 CEP170Q5SW79 1584 aa24.97■■□□□ 1.59
WDR53-202ENST00000425888 NUP160Q12769 1436 aa24.96■■□□□ 1.59
WDR53-202ENST00000425888 IGF1RP08069 1367 aa24.93■■□□□ 1.58
WDR53-202ENST00000425888 ERCC6L2Q5T890 1561 aa24.82■■□□□ 1.56
WDR53-202ENST00000425888 CUL7Q14999 1698 aa24.8■■□□□ 1.56
WDR53-202ENST00000425888 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
WDR53-202ENST00000425888 SHROOM2Q13796 1616 aa24.77■■□□□ 1.56
WDR53-202ENST00000425888 JPH4Q96JJ6 628 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms