RNA–Protein interactions for RNA: ENST00000425423.1

ABCA2-205, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5

Gene ABCA2, Length 213 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-205ENST00000425423 NISCHQ9Y2I1 1504 aa20.49■□□□□ 0.87
ABCA2-205ENST00000425423 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
ABCA2-205ENST00000425423 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
ABCA2-205ENST00000425423 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
ABCA2-205ENST00000425423 ABCC9O60706 1549 aa16.96■□□□□ 0.31
ABCA2-205ENST00000425423 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
ABCA2-205ENST00000425423 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
ABCA2-205ENST00000425423 NACADO15069 1562 aa16.77■□□□□ 0.28
ABCA2-205ENST00000425423 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
ABCA2-205ENST00000425423 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
ABCA2-205ENST00000425423 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
ABCA2-205ENST00000425423 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
ABCA2-205ENST00000425423 BICRAQ9NZM4 1560 aa16■□□□□ 0.15
ABCA2-205ENST00000425423 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
ABCA2-205ENST00000425423 SUPT5HO00267 1087 aaKnown RBP15.95■□□□□ 0.14
ABCA2-205ENST00000425423 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
ABCA2-205ENST00000425423 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
ABCA2-205ENST00000425423 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
ABCA2-205ENST00000425423 MROH2BQ7Z745 1585 aa15.76■□□□□ 0.11
ABCA2-205ENST00000425423 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
ABCA2-205ENST00000425423 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
ABCA2-205ENST00000425423 WIZO95785 1651 aa15.6■□□□□ 0.09
ABCA2-205ENST00000425423 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
ABCA2-205ENST00000425423 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
ABCA2-205ENST00000425423 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
ABCA2-205ENST00000425423 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
ABCA2-205ENST00000425423 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
ABCA2-205ENST00000425423 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
ABCA2-205ENST00000425423 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
ABCA2-205ENST00000425423 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
ABCA2-205ENST00000425423 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
ABCA2-205ENST00000425423 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
ABCA2-205ENST00000425423 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
ABCA2-205ENST00000425423 CFTRP13569 1480 aa15.08■□□□□ 0
ABCA2-205ENST00000425423 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
ABCA2-205ENST00000425423 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
ABCA2-205ENST00000425423 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.01
ABCA2-205ENST00000425423 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
ABCA2-205ENST00000425423 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
ABCA2-205ENST00000425423 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
ABCA2-205ENST00000425423 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
ABCA2-205ENST00000425423 FANCD2Q9BXW9 1451 aa14.86□□□□□ -0.03
ABCA2-205ENST00000425423 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
ABCA2-205ENST00000425423 NESP48681 1621 aa14.81□□□□□ -0.04
ABCA2-205ENST00000425423 EEA1Q15075 1411 aa14.81□□□□□ -0.04
ABCA2-205ENST00000425423 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
ABCA2-205ENST00000425423 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
ABCA2-205ENST00000425423 BIVM-ERCC5R4GMW8 1640 aa14.79□□□□□ -0.04
ABCA2-205ENST00000425423 CUX1P39880 1505 aa14.75□□□□□ -0.05
ABCA2-205ENST00000425423 DNMBPQ6XZF7 1577 aa14.72□□□□□ -0.05
ABCA2-205ENST00000425423 FAM9AQ8IZU1 332 aaPredicted RBP14.7□□□□□ -0.06
ABCA2-205ENST00000425423 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
ABCA2-205ENST00000425423 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
ABCA2-205ENST00000425423 SOGA1O94964 1423 aa14.66□□□□□ -0.06
ABCA2-205ENST00000425423 ERCC6Q03468 1493 aa14.65□□□□□ -0.06
ABCA2-205ENST00000425423 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
ABCA2-205ENST00000425423 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
ABCA2-205ENST00000425423 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
ABCA2-205ENST00000425423 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
ABCA2-205ENST00000425423 KIF21AQ7Z4S6 1674 aa14.62□□□□□ -0.07
ABCA2-205ENST00000425423 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
ABCA2-205ENST00000425423 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
ABCA2-205ENST00000425423 CUX2O14529 1486 aa14.56□□□□□ -0.08
ABCA2-205ENST00000425423 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
ABCA2-205ENST00000425423 RUSC2Q8N2Y8 1516 aa14.55□□□□□ -0.08
ABCA2-205ENST00000425423 WDR62O43379 1518 aa14.54□□□□□ -0.08
ABCA2-205ENST00000425423 GOLGA3Q08378 1498 aa14.52□□□□□ -0.08
ABCA2-205ENST00000425423 KIF21BO75037 1637 aa14.5□□□□□ -0.09
ABCA2-205ENST00000425423 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
ABCA2-205ENST00000425423 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
ABCA2-205ENST00000425423 UBTFP17480 764 aaKnown RBP14.47□□□□□ -0.09
ABCA2-205ENST00000425423 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
ABCA2-205ENST00000425423 IGF1RP08069 1367 aa14.46□□□□□ -0.1
ABCA2-205ENST00000425423 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.1
ABCA2-205ENST00000425423 PRXQ9BXM0 1461 aa14.45□□□□□ -0.1
ABCA2-205ENST00000425423 THOC2Q8NI27 1593 aaKnown RBP14.45□□□□□ -0.1
ABCA2-205ENST00000425423 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
ABCA2-205ENST00000425423 TARBP1Q13395 1621 aaKnown RBP14.42□□□□□ -0.1
ABCA2-205ENST00000425423 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
ABCA2-205ENST00000425423 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
ABCA2-205ENST00000425423 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
ABCA2-205ENST00000425423 TDRD9Q8NDG6 1382 aaKnown RBP14.4□□□□□ -0.1
ABCA2-205ENST00000425423 RAPGEF2Q9Y4G8 1499 aa14.39□□□□□ -0.11
ABCA2-205ENST00000425423 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
ABCA2-205ENST00000425423 CUL7Q14999 1698 aa14.38□□□□□ -0.11
ABCA2-205ENST00000425423 GRIN2BQ13224 1484 aa14.35□□□□□ -0.11
ABCA2-205ENST00000425423 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
ABCA2-205ENST00000425423 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
ABCA2-205ENST00000425423 FHAD1B1AJZ9 1412 aa14.3□□□□□ -0.12
ABCA2-205ENST00000425423 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.12
ABCA2-205ENST00000425423 CLIP1P30622 1438 aa14.27□□□□□ -0.12
ABCA2-205ENST00000425423 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
ABCA2-205ENST00000425423 MAGI1Q96QZ7 1491 aaPredicted RBP14.25□□□□□ -0.13
ABCA2-205ENST00000425423 EIF4G3O43432 1585 aaKnown RBP14.25□□□□□ -0.13
ABCA2-205ENST00000425423 ADAMTS12P58397 1594 aa14.22□□□□□ -0.13
ABCA2-205ENST00000425423 SNAPC4Q5SXM2 1469 aa14.19□□□□□ -0.14
ABCA2-205ENST00000425423 CHMP7Q8WUX9 453 aaPredicted RBP14.18□□□□□ -0.14
ABCA2-205ENST00000425423 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
ABCA2-205ENST00000425423 RANGAP1P46060 587 aaPredicted RBP14.14□□□□□ -0.15
ABCA2-205ENST00000425423 VPS8Q8N3P4 1428 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 470.7 ms