RNA–Protein interactions for RNA: ENST00000425423.1
ABCA2-205, Transcript of ATP binding cassette subfamily A member 2, human
Retrieved 5 of 5 RNA–protein pairs in 2.7 ms
ABCA2-205, Transcript of ATP binding cassette subfamily A member 2, human
TSL 5
Gene ABCA2, Length 213 nt, Biotype retained intron, Subcellular localisation Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA2-205 | ENST00000425423 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 9.66 | □□□□□ -0.86 | 1e-11 | ■■■■□ 19.4 |
ABCA2-205 | ENST00000425423 | SF3B1 | O75533 | 1304 aa | Known RBP eCLIP | 9.54 | □□□□□ -0.88 | 3e-9 | ■■■■■ 206.8 |
ABCA2-205 | ENST00000425423 | PPIG | Q13427 | 754 aa | Known RBP eCLIP | 9.53 | □□□□□ -0.88 | 3e-8 | ■■■■□ 22.2 |
ABCA2-205 | ENST00000425423 | UTP3 | Q9NQZ2 | 479 aa | Known RBP eCLIP | 9.65 | □□□□□ -0.86 | 7e-8 | ■■■■■ 186.3 |
ABCA2-205 | ENST00000425423 | RBFOX2 | O43251 | 390 aa | Known RBP eCLIP | 7.44 | □□□□□ -1.22 | 5e-6 | ■■□□□ 13.9 |