RNA–Protein interactions for RNA: ENST00000423351.5

PBRM1-211, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-211ENST00000423351 NISCHQ9Y2I1 1504 aa11.56□□□□□ -0.56
PBRM1-211ENST00000423351 CCDC180Q9P1Z9 1646 aa10.13□□□□□ -0.79
PBRM1-211ENST00000423351 ZCCHC6Q5VYS8 1495 aaKnown RBP9.75□□□□□ -0.85
PBRM1-211ENST00000423351 DCAF1Q9Y4B6 1507 aa9.64□□□□□ -0.87
PBRM1-211ENST00000423351 MYO15BQ96JP2 1530 aa9.51□□□□□ -0.89
PBRM1-211ENST00000423351 NACADO15069 1562 aa9.38□□□□□ -0.91
PBRM1-211ENST00000423351 ABCC9O60706 1549 aa9.35□□□□□ -0.91
PBRM1-211ENST00000423351 DCAF8L2P0C7V8 631 aa9.33□□□□□ -0.92
PBRM1-211ENST00000423351 SHROOM4Q9ULL8 1493 aa9.32□□□□□ -0.92
PBRM1-211ENST00000423351 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
PBRM1-211ENST00000423351 SCRIBQ14160 1630 aa9.21□□□□□ -0.94
PBRM1-211ENST00000423351 UNC13AQ9UPW8 1703 aa9.09□□□□□ -0.95
PBRM1-211ENST00000423351 SUPT5HO00267 1087 aaKnown RBP9.01□□□□□ -0.97
PBRM1-211ENST00000423351 RSF1Q96T23 1441 aaPredicted RBP8.97□□□□□ -0.97
PBRM1-211ENST00000423351 BICRAQ9NZM4 1560 aa8.97□□□□□ -0.97
PBRM1-211ENST00000423351 BAZ1AQ9NRL2 1556 aaPredicted RBP8.94□□□□□ -0.98
PBRM1-211ENST00000423351 CECR2Q9BXF3 1484 aa8.92□□□□□ -0.98
PBRM1-211ENST00000423351 MROH2BQ7Z745 1585 aa8.9□□□□□ -0.98
PBRM1-211ENST00000423351 SMARCA4P51532 1647 aa8.89□□□□□ -0.99
PBRM1-211ENST00000423351 WIZO95785 1651 aa8.84□□□□□ -0.99
PBRM1-211ENST00000423351 PEG3Q9GZU2 1588 aa8.82□□□□□ -1
PBRM1-211ENST00000423351 TOP2AP11388 1531 aaKnown RBP8.8□□□□□ -1
PBRM1-211ENST00000423351 PABPN1Q86U42 306 aaKnown RBP eCLIP8.77□□□□□ -1
PBRM1-211ENST00000423351 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
PBRM1-211ENST00000423351 CHIC1Q5VXU3 224 aa8.73□□□□□ -1.01
PBRM1-211ENST00000423351 EIF4G1Q04637 1599 aaKnown RBP8.7□□□□□ -1.02
PBRM1-211ENST00000423351 ATAD2BQ9ULI0 1458 aa8.69□□□□□ -1.02
PBRM1-211ENST00000423351 HMGXB3Q12766 1538 aa8.66□□□□□ -1.02
PBRM1-211ENST00000423351 CCDC88BA6NC98 1476 aa8.66□□□□□ -1.02
PBRM1-211ENST00000423351 BAZ1BQ9UIG0 1483 aaKnown RBP8.64□□□□□ -1.03
PBRM1-211ENST00000423351 NCAPD3P42695 1498 aa8.63□□□□□ -1.03
PBRM1-211ENST00000423351 CC2D2AQ9P2K1 1620 aa8.52□□□□□ -1.04
PBRM1-211ENST00000423351 TRIM41Q8WV44 630 aa8.51□□□□□ -1.05
PBRM1-211ENST00000423351 PRDM2Q13029 1718 aa8.5□□□□□ -1.05
PBRM1-211ENST00000423351 ABCC8Q09428 1581 aa8.47□□□□□ -1.05
PBRM1-211ENST00000423351 CFTRP13569 1480 aa8.45□□□□□ -1.06
PBRM1-211ENST00000423351 WRNQ14191 1432 aaPredicted RBP eCLIP8.44□□□□□ -1.06
PBRM1-211ENST00000423351 BIVM-ERCC5R4GMW8 1640 aa8.42□□□□□ -1.06
PBRM1-211ENST00000423351 EEA1Q15075 1411 aa8.42□□□□□ -1.06
PBRM1-211ENST00000423351 SYNJ1O43426 1573 aa8.41□□□□□ -1.06
PBRM1-211ENST00000423351 TOP2BQ02880 1626 aa8.41□□□□□ -1.06
PBRM1-211ENST00000423351 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
PBRM1-211ENST00000423351 LAMC3Q9Y6N6 1575 aa8.34□□□□□ -1.07
PBRM1-211ENST00000423351 CUX1P39880 1505 aa8.33□□□□□ -1.08
PBRM1-211ENST00000423351 LOC105371045A0A1W2PR82 267 aa8.33□□□□□ -1.08
PBRM1-211ENST00000423351 SOGA1O94964 1423 aa8.31□□□□□ -1.08
PBRM1-211ENST00000423351 KIF21BO75037 1637 aa8.31□□□□□ -1.08
PBRM1-211ENST00000423351 AEBP2Q6ZN18 517 aaPredicted RBP8.3□□□□□ -1.08
PBRM1-211ENST00000423351 FANCD2Q9BXW9 1451 aa8.29□□□□□ -1.08
PBRM1-211ENST00000423351 FAM9AQ8IZU1 332 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-211ENST00000423351 RUSC2Q8N2Y8 1516 aa8.27□□□□□ -1.09
PBRM1-211ENST00000423351 CSRNP3Q8WYN3 585 aa8.27□□□□□ -1.09
PBRM1-211ENST00000423351 DNMBPQ6XZF7 1577 aa8.27□□□□□ -1.09
PBRM1-211ENST00000423351 GOLGA3Q08378 1498 aa8.26□□□□□ -1.09
PBRM1-211ENST00000423351 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
PBRM1-211ENST00000423351 TNIKQ9UKE5 1360 aa8.25□□□□□ -1.09
PBRM1-211ENST00000423351 ERICH3Q5RHP9 1530 aa8.24□□□□□ -1.09
PBRM1-211ENST00000423351 NESP48681 1621 aa8.24□□□□□ -1.09
PBRM1-211ENST00000423351 PDS5BQ9NTI5 1447 aa8.23□□□□□ -1.09
PBRM1-211ENST00000423351 KIF27Q86VH2 1401 aa8.23□□□□□ -1.09
PBRM1-211ENST00000423351 FGD5Q6ZNL6 1462 aa8.22□□□□□ -1.09
PBRM1-211ENST00000423351 TOPBP1Q92547 1522 aa8.22□□□□□ -1.09
PBRM1-211ENST00000423351 KIF21AQ7Z4S6 1674 aa8.21□□□□□ -1.1
PBRM1-211ENST00000423351 PRXQ9BXM0 1461 aa8.2□□□□□ -1.1
PBRM1-211ENST00000423351 WDR97A6NE52 1622 aa8.19□□□□□ -1.1
PBRM1-211ENST00000423351 ABCA10Q8WWZ4 1543 aa8.18□□□□□ -1.1
PBRM1-211ENST00000423351 CEP162Q5TB80 1403 aa8.18□□□□□ -1.1
PBRM1-211ENST00000423351 URB2Q14146 1524 aaKnown RBP8.18□□□□□ -1.1
PBRM1-211ENST00000423351 POLA1P09884 1462 aaPredicted RBP8.17□□□□□ -1.1
PBRM1-211ENST00000423351 CUX2O14529 1486 aa8.16□□□□□ -1.1
PBRM1-211ENST00000423351 RAPGEF2Q9Y4G8 1499 aa8.16□□□□□ -1.1
PBRM1-211ENST00000423351 DNAJC5BQ9UF47 199 aa8.15□□□□□ -1.11
PBRM1-211ENST00000423351 CUL7Q14999 1698 aa8.14□□□□□ -1.11
PBRM1-211ENST00000423351 MRC2Q9UBG0 1479 aa8.14□□□□□ -1.11
PBRM1-211ENST00000423351 ABCA5Q8WWZ7 1642 aa8.13□□□□□ -1.11
PBRM1-211ENST00000423351 IGF1RP08069 1367 aa8.12□□□□□ -1.11
PBRM1-211ENST00000423351 UBTFP17480 764 aaKnown RBP8.12□□□□□ -1.11
PBRM1-211ENST00000423351 TARBP1Q13395 1621 aaKnown RBP8.12□□□□□ -1.11
PBRM1-211ENST00000423351 WDR62O43379 1518 aa8.11□□□□□ -1.11
PBRM1-211ENST00000423351 RAD54L2Q9Y4B4 1467 aa8.1□□□□□ -1.11
PBRM1-211ENST00000423351 CLIP1P30622 1438 aa8.1□□□□□ -1.11
PBRM1-211ENST00000423351 EHMT2Q96KQ7 1210 aa8.1□□□□□ -1.11
PBRM1-211ENST00000423351 TRIM26Q12899 539 aaPredicted RBP8.08□□□□□ -1.12
PBRM1-211ENST00000423351 CARMIL1Q5VZK9 1371 aa8.08□□□□□ -1.12
PBRM1-211ENST00000423351 THOC2Q8NI27 1593 aaKnown RBP8.07□□□□□ -1.12
PBRM1-211ENST00000423351 VPS8Q8N3P4 1428 aa8.07□□□□□ -1.12
PBRM1-211ENST00000423351 PBRM1Q86U86 1689 aa8.06□□□□□ -1.12
PBRM1-211ENST00000423351 CTTNBP2Q8WZ74 1663 aa8.06□□□□□ -1.12
PBRM1-211ENST00000423351 GAPVD1Q14C86 1478 aa8.06□□□□□ -1.12
PBRM1-211ENST00000423351 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
PBRM1-211ENST00000423351 ARAP1Q96P48 1450 aa8.03□□□□□ -1.12
PBRM1-211ENST00000423351 PCGF6Q9BYE7 350 aa8.03□□□□□ -1.12
PBRM1-211ENST00000423351 ERCC6Q03468 1493 aa8.02□□□□□ -1.13
PBRM1-211ENST00000423351 EFCAB5A4FU69 1503 aa8.02□□□□□ -1.13
PBRM1-211ENST00000423351 ARHGAP35Q9NRY4 1499 aa8.01□□□□□ -1.13
PBRM1-211ENST00000423351 ADAMTS12P58397 1594 aa8.01□□□□□ -1.13
PBRM1-211ENST00000423351 GRIN2BQ13224 1484 aa8□□□□□ -1.13
PBRM1-211ENST00000423351 TDRD9Q8NDG6 1382 aaKnown RBP8□□□□□ -1.13
PBRM1-211ENST00000423351 FHAD1B1AJZ9 1412 aa7.99□□□□□ -1.13
PBRM1-211ENST00000423351 MAP3K1Q13233 1512 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms