RNA–Protein interactions for RNA: ENST00000422516.5

NINL-203, Transcript of ninein like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NINL, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-203ENST00000422516 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
NINL-203ENST00000422516 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
NINL-203ENST00000422516 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
NINL-203ENST00000422516 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
NINL-203ENST00000422516 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
NINL-203ENST00000422516 ZCCHC6Q5VYS8 1495 aaKnown RBP22.51■■□□□ 1.19
NINL-203ENST00000422516 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
NINL-203ENST00000422516 HRCP23327 699 aa22.45■■□□□ 1.18
NINL-203ENST00000422516 MYO15BQ96JP2 1530 aa22.32■■□□□ 1.16
NINL-203ENST00000422516 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
NINL-203ENST00000422516 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
NINL-203ENST00000422516 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
NINL-203ENST00000422516 TRIM26Q12899 539 aaPredicted RBP21.79■■□□□ 1.08
NINL-203ENST00000422516 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
NINL-203ENST00000422516 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
NINL-203ENST00000422516 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
NINL-203ENST00000422516 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
NINL-203ENST00000422516 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
NINL-203ENST00000422516 SCRIBQ14160 1630 aa21.33■■□□□ 1.01
NINL-203ENST00000422516 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
NINL-203ENST00000422516 ABCC9O60706 1549 aa21.28■■□□□ 1
NINL-203ENST00000422516 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
NINL-203ENST00000422516 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
NINL-203ENST00000422516 TTBK1Q5TCY1 1321 aaPredicted RBP21.1■□□□□ 0.97
NINL-203ENST00000422516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
NINL-203ENST00000422516 PELP1Q8IZL8 1130 aaKnown RBP21■□□□□ 0.95
NINL-203ENST00000422516 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
NINL-203ENST00000422516 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.93
NINL-203ENST00000422516 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
NINL-203ENST00000422516 CENPBP07199 599 aaPredicted RBP20.75■□□□□ 0.91
NINL-203ENST00000422516 UBTFP17480 764 aaKnown RBP20.74■□□□□ 0.91
NINL-203ENST00000422516 DIEXFQ68CQ4 756 aaKnown RBP20.73■□□□□ 0.91
NINL-203ENST00000422516 NACADO15069 1562 aa20.67■□□□□ 0.9
NINL-203ENST00000422516 WIZO95785 1651 aa20.67■□□□□ 0.9
NINL-203ENST00000422516 ACIN1Q9UKV3 1341 aaKnown RBP20.67■□□□□ 0.9
NINL-203ENST00000422516 NEUROD1Q13562 356 aa20.61■□□□□ 0.89
NINL-203ENST00000422516 GTF3C3Q9Y5Q9 886 aa20.57■□□□□ 0.88
NINL-203ENST00000422516 YTHDC1Q96MU7 727 aaKnown RBP20.54■□□□□ 0.88
NINL-203ENST00000422516 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
NINL-203ENST00000422516 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
NINL-203ENST00000422516 ABCC8Q09428 1581 aa20.47■□□□□ 0.87
NINL-203ENST00000422516 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
NINL-203ENST00000422516 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
NINL-203ENST00000422516 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
NINL-203ENST00000422516 APLP2Q06481 763 aa20.46■□□□□ 0.87
NINL-203ENST00000422516 CCDC88BA6NC98 1476 aa20.44■□□□□ 0.86
NINL-203ENST00000422516 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
NINL-203ENST00000422516 SOGA1O94964 1423 aa20.39■□□□□ 0.86
NINL-203ENST00000422516 TNIKQ9UKE5 1360 aa20.35■□□□□ 0.85
NINL-203ENST00000422516 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
NINL-203ENST00000422516 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.849e-7■■■■■ 29.6
NINL-203ENST00000422516 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
NINL-203ENST00000422516 EEA1Q15075 1411 aa20.25■□□□□ 0.83
NINL-203ENST00000422516 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
NINL-203ENST00000422516 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
NINL-203ENST00000422516 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
NINL-203ENST00000422516 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
NINL-203ENST00000422516 EIF4G1Q04637 1599 aaKnown RBP20.18■□□□□ 0.82
NINL-203ENST00000422516 MIER1Q8N108 512 aa20.16■□□□□ 0.82
NINL-203ENST00000422516 CLIP1P30622 1438 aa20.11■□□□□ 0.81
NINL-203ENST00000422516 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
NINL-203ENST00000422516 MYT1Q01538 1121 aa20.05■□□□□ 0.8
NINL-203ENST00000422516 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
NINL-203ENST00000422516 ITGAEP38570 1179 aa19.94■□□□□ 0.78
NINL-203ENST00000422516 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
NINL-203ENST00000422516 SYNJ1O43426 1573 aa19.82■□□□□ 0.76
NINL-203ENST00000422516 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
NINL-203ENST00000422516 KIF21BO75037 1637 aa19.77■□□□□ 0.76
NINL-203ENST00000422516 UNC13AQ9UPW8 1703 aa19.77■□□□□ 0.75
NINL-203ENST00000422516 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
NINL-203ENST00000422516 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
NINL-203ENST00000422516 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
NINL-203ENST00000422516 CLSPNQ9HAW4 1339 aa19.69■□□□□ 0.74
NINL-203ENST00000422516 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
NINL-203ENST00000422516 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
NINL-203ENST00000422516 SUPT16HQ9Y5B9 1047 aaKnown RBP19.6■□□□□ 0.73
NINL-203ENST00000422516 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
NINL-203ENST00000422516 BCANQ96GW7 911 aa19.56■□□□□ 0.72
NINL-203ENST00000422516 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
NINL-203ENST00000422516 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
NINL-203ENST00000422516 KIF27Q86VH2 1401 aa19.54■□□□□ 0.72
NINL-203ENST00000422516 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
NINL-203ENST00000422516 DDX10Q13206 875 aaKnown RBP19.48■□□□□ 0.71
NINL-203ENST00000422516 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
NINL-203ENST00000422516 NEFLP07196 543 aa19.48■□□□□ 0.71
NINL-203ENST00000422516 P3H3Q8IVL6 736 aa19.47■□□□□ 0.71
NINL-203ENST00000422516 PRXQ9BXM0 1461 aa19.44■□□□□ 0.7
NINL-203ENST00000422516 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
NINL-203ENST00000422516 KCNH8Q96L42 1107 aa19.42■□□□□ 0.7
NINL-203ENST00000422516 RAB3GAP2Q9H2M9 1393 aa19.41■□□□□ 0.7
NINL-203ENST00000422516 FKBP8Q14318 412 aa19.4■□□□□ 0.7
NINL-203ENST00000422516 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
NINL-203ENST00000422516 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
NINL-203ENST00000422516 HIRIP3Q9BW71 556 aaPredicted RBP19.39■□□□□ 0.69
NINL-203ENST00000422516 ANP32CO43423 234 aa19.33■□□□□ 0.68
NINL-203ENST00000422516 TSHZ2Q9NRE2 1034 aa19.33■□□□□ 0.68
NINL-203ENST00000422516 CUX2O14529 1486 aa19.32■□□□□ 0.68
NINL-203ENST00000422516 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
NINL-203ENST00000422516 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
NINL-203ENST00000422516 CUX1P39880 1505 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms