RNA–Protein interactions for RNA: ENST00000422064.1

PMS2P3-203, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5 BASIC

Gene PMS2P3, Length 567 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-203ENST00000422064 NISCHQ9Y2I1 1504 aa15.64■□□□□ 0.09
PMS2P3-203ENST00000422064 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
PMS2P3-203ENST00000422064 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
PMS2P3-203ENST00000422064 DNAJC5Q9H3Z4 198 aa13.49□□□□□ -0.25
PMS2P3-203ENST00000422064 ABCC9O60706 1549 aa13.34□□□□□ -0.27
PMS2P3-203ENST00000422064 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
PMS2P3-203ENST00000422064 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
PMS2P3-203ENST00000422064 MYO15BQ96JP2 1530 aa13.01□□□□□ -0.33
PMS2P3-203ENST00000422064 NACADO15069 1562 aa12.94□□□□□ -0.34
PMS2P3-203ENST00000422064 RB1CC1Q8TDY2 1594 aa12.86□□□□□ -0.35
PMS2P3-203ENST00000422064 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
PMS2P3-203ENST00000422064 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
PMS2P3-203ENST00000422064 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.41
PMS2P3-203ENST00000422064 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
PMS2P3-203ENST00000422064 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
PMS2P3-203ENST00000422064 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
PMS2P3-203ENST00000422064 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
PMS2P3-203ENST00000422064 CECR2Q9BXF3 1484 aa12.18□□□□□ -0.46
PMS2P3-203ENST00000422064 BAZ1AQ9NRL2 1556 aaPredicted RBP12.12□□□□□ -0.47
PMS2P3-203ENST00000422064 AEBP2Q6ZN18 517 aaPredicted RBP12.09□□□□□ -0.47
PMS2P3-203ENST00000422064 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
PMS2P3-203ENST00000422064 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
PMS2P3-203ENST00000422064 CUX2O14529 1486 aa12.03□□□□□ -0.48
PMS2P3-203ENST00000422064 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
PMS2P3-203ENST00000422064 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
PMS2P3-203ENST00000422064 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
PMS2P3-203ENST00000422064 SMARCA2P51531 1590 aa11.96□□□□□ -0.5
PMS2P3-203ENST00000422064 CC2D2AQ9P2K1 1620 aa11.94□□□□□ -0.5
PMS2P3-203ENST00000422064 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
PMS2P3-203ENST00000422064 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
PMS2P3-203ENST00000422064 WIZO95785 1651 aa11.89□□□□□ -0.51
PMS2P3-203ENST00000422064 HMGXB3Q12766 1538 aa11.89□□□□□ -0.51
PMS2P3-203ENST00000422064 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
PMS2P3-203ENST00000422064 TOP2AP11388 1531 aaKnown RBP11.82□□□□□ -0.52
PMS2P3-203ENST00000422064 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
PMS2P3-203ENST00000422064 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
PMS2P3-203ENST00000422064 CCDC88BA6NC98 1476 aa11.67□□□□□ -0.54
PMS2P3-203ENST00000422064 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
PMS2P3-203ENST00000422064 CADPSQ9ULU8 1353 aa11.57□□□□□ -0.56
PMS2P3-203ENST00000422064 CFTRP13569 1480 aa11.57□□□□□ -0.56
PMS2P3-203ENST00000422064 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
PMS2P3-203ENST00000422064 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
PMS2P3-203ENST00000422064 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
PMS2P3-203ENST00000422064 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
PMS2P3-203ENST00000422064 NESP48681 1621 aa11.45□□□□□ -0.58
PMS2P3-203ENST00000422064 FANCD2Q9BXW9 1451 aa11.41□□□□□ -0.58
PMS2P3-203ENST00000422064 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
PMS2P3-203ENST00000422064 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
PMS2P3-203ENST00000422064 ABCC8Q09428 1581 aa11.35□□□□□ -0.59
PMS2P3-203ENST00000422064 KIF21AQ7Z4S6 1674 aa11.35□□□□□ -0.59
PMS2P3-203ENST00000422064 WRNQ14191 1432 aaPredicted RBP eCLIP11.31□□□□□ -0.6
PMS2P3-203ENST00000422064 MRC2Q9UBG0 1479 aa11.31□□□□□ -0.6
PMS2P3-203ENST00000422064 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
PMS2P3-203ENST00000422064 TOP2BQ02880 1626 aa11.27□□□□□ -0.6
PMS2P3-203ENST00000422064 BIVM-ERCC5R4GMW8 1640 aa11.27□□□□□ -0.6
PMS2P3-203ENST00000422064 WDR62O43379 1518 aa11.27□□□□□ -0.61
PMS2P3-203ENST00000422064 CUX1P39880 1505 aa11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 URB2Q14146 1524 aaKnown RBP11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 THOC2Q8NI27 1593 aaKnown RBP11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 CHIC1Q5VXU3 224 aa11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
PMS2P3-203ENST00000422064 CYB5RLQ6IPT4 315 aa11.19□□□□□ -0.62
PMS2P3-203ENST00000422064 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
PMS2P3-203ENST00000422064 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
PMS2P3-203ENST00000422064 SOGA1O94964 1423 aa11.15□□□□□ -0.62
PMS2P3-203ENST00000422064 IFT140Q96RY7 1462 aa11.14□□□□□ -0.63
PMS2P3-203ENST00000422064 RIMBP3CA6NJZ7 1639 aa11.14□□□□□ -0.63
PMS2P3-203ENST00000422064 RIMBP3BA6NNM3 1639 aa11.14□□□□□ -0.63
PMS2P3-203ENST00000422064 RIMBP3Q9UFD9 1639 aa11.14□□□□□ -0.63
PMS2P3-203ENST00000422064 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
PMS2P3-203ENST00000422064 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
PMS2P3-203ENST00000422064 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
PMS2P3-203ENST00000422064 SOCS7O14512 581 aa11.1□□□□□ -0.63
PMS2P3-203ENST00000422064 EEA1Q15075 1411 aa11.09□□□□□ -0.63
PMS2P3-203ENST00000422064 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
PMS2P3-203ENST00000422064 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
PMS2P3-203ENST00000422064 LMTK3Q96Q04 1460 aa11.06□□□□□ -0.64
PMS2P3-203ENST00000422064 ARHGEF11O15085 1522 aa11.05□□□□□ -0.64
PMS2P3-203ENST00000422064 ABCA5Q8WWZ7 1642 aa11.04□□□□□ -0.64
PMS2P3-203ENST00000422064 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
PMS2P3-203ENST00000422064 GAPVD1Q14C86 1478 aa11.02□□□□□ -0.65
PMS2P3-203ENST00000422064 FBXO41Q8TF61 875 aa11.02□□□□□ -0.65
PMS2P3-203ENST00000422064 ERICH3Q5RHP9 1530 aa11.02□□□□□ -0.65
PMS2P3-203ENST00000422064 TDRD9Q8NDG6 1382 aaKnown RBP11.01□□□□□ -0.65
PMS2P3-203ENST00000422064 GRIN2BQ13224 1484 aa11□□□□□ -0.65
PMS2P3-203ENST00000422064 ZNF608Q9ULD9 1512 aaPredicted RBP11□□□□□ -0.65
PMS2P3-203ENST00000422064 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
PMS2P3-203ENST00000422064 IGF1RP08069 1367 aa10.99□□□□□ -0.65
PMS2P3-203ENST00000422064 AQRO60306 1485 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■■■ 33.7
PMS2P3-203ENST00000422064 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
PMS2P3-203ENST00000422064 RUSC2Q8N2Y8 1516 aa10.98□□□□□ -0.65
PMS2P3-203ENST00000422064 HRCP23327 699 aa10.97□□□□□ -0.65
PMS2P3-203ENST00000422064 PBRM1Q86U86 1689 aa10.97□□□□□ -0.65
PMS2P3-203ENST00000422064 CUL7Q14999 1698 aa10.96□□□□□ -0.65
PMS2P3-203ENST00000422064 MAGI1Q96QZ7 1491 aaPredicted RBP10.96□□□□□ -0.65
PMS2P3-203ENST00000422064 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
PMS2P3-203ENST00000422064 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
PMS2P3-203ENST00000422064 CARMIL1Q5VZK9 1371 aa10.92□□□□□ -0.66
PMS2P3-203ENST00000422064 KIF21BO75037 1637 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms