RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 NISCHQ9Y2I1 1504 aa44.36■■■■■ 4.69
UBXN11-208ENST00000421827 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
UBXN11-208ENST00000421827 ABCC9O60706 1549 aa39.04■■■■□ 3.84
UBXN11-208ENST00000421827 RB1CC1Q8TDY2 1594 aa37.4■■■■□ 3.58
UBXN11-208ENST00000421827 NACADO15069 1562 aa37.29■■■■□ 3.56
UBXN11-208ENST00000421827 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
UBXN11-208ENST00000421827 MYO15BQ96JP2 1530 aa36.96■■■■□ 3.51
UBXN11-208ENST00000421827 ZCCHC6Q5VYS8 1495 aaKnown RBP36.88■■■■□ 3.49
UBXN11-208ENST00000421827 DCAF1Q9Y4B6 1507 aa36.68■■■■□ 3.46
UBXN11-208ENST00000421827 UNC13AQ9UPW8 1703 aa36.5■■■■□ 3.43
UBXN11-208ENST00000421827 PABPN1Q86U42 306 aaKnown RBP eCLIP36.46■■■■□ 3.43
UBXN11-208ENST00000421827 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
UBXN11-208ENST00000421827 DNAJC5BQ9UF47 199 aa36.15■■■■□ 3.38
UBXN11-208ENST00000421827 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
UBXN11-208ENST00000421827 SHROOM4Q9ULL8 1493 aa35.87■■■■□ 3.33
UBXN11-208ENST00000421827 EIF4G1Q04637 1599 aaKnown RBP35.35■■■■□ 3.25
UBXN11-208ENST00000421827 CC2D2AQ9P2K1 1620 aa35.28■■■■□ 3.24
UBXN11-208ENST00000421827 CECR2Q9BXF3 1484 aa35.12■■■■□ 3.21
UBXN11-208ENST00000421827 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
UBXN11-208ENST00000421827 NCAPD3P42695 1498 aa34.42■■■■□ 3.1
UBXN11-208ENST00000421827 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
UBXN11-208ENST00000421827 ATAD2BQ9ULI0 1458 aa34.39■■■■□ 3.1
UBXN11-208ENST00000421827 SMARCA2P51531 1590 aa34.32■■■■□ 3.09
UBXN11-208ENST00000421827 HMGXB3Q12766 1538 aa34.2■■■■□ 3.07
UBXN11-208ENST00000421827 MROH2BQ7Z745 1585 aa34.18■■■■□ 3.06
UBXN11-208ENST00000421827 PEG3Q9GZU2 1588 aa34.15■■■■□ 3.06
UBXN11-208ENST00000421827 BAZ1BQ9UIG0 1483 aaKnown RBP34.09■■■■□ 3.05
UBXN11-208ENST00000421827 WIZO95785 1651 aa33.78■■■■□ 3
UBXN11-208ENST00000421827 NESP48681 1621 aa33.69■■■□□ 2.98
UBXN11-208ENST00000421827 RSF1Q96T23 1441 aaPredicted RBP33.69■■■□□ 2.98
UBXN11-208ENST00000421827 ERCC6Q03468 1493 aa33.69■■■□□ 2.98
UBXN11-208ENST00000421827 LAMC3Q9Y6N6 1575 aa33.55■■■□□ 2.96
UBXN11-208ENST00000421827 CUX2O14529 1486 aa33.44■■■□□ 2.94
UBXN11-208ENST00000421827 CADPSQ9ULU8 1353 aa33.42■■■□□ 2.94
UBXN11-208ENST00000421827 TOP2AP11388 1531 aaKnown RBP33.41■■■□□ 2.94
UBXN11-208ENST00000421827 PDS5BQ9NTI5 1447 aa33.36■■■□□ 2.93
UBXN11-208ENST00000421827 KIF21AQ7Z4S6 1674 aa33.25■■■□□ 2.91
UBXN11-208ENST00000421827 THOC2Q8NI27 1593 aaKnown RBP33.22■■■□□ 2.91
UBXN11-208ENST00000421827 CFTRP13569 1480 aa33.13■■■□□ 2.89
UBXN11-208ENST00000421827 CCDC88BA6NC98 1476 aa33.04■■■□□ 2.88
UBXN11-208ENST00000421827 FANCD2Q9BXW9 1451 aa33.02■■■□□ 2.88
UBXN11-208ENST00000421827 MRC2Q9UBG0 1479 aa33.02■■■□□ 2.88
UBXN11-208ENST00000421827 CEP164Q9UPV0 1460 aa32.99■■■□□ 2.87
UBXN11-208ENST00000421827 WDR62O43379 1518 aa32.91■■■□□ 2.86
UBXN11-208ENST00000421827 DNAJC5Q9H3Z4 198 aa32.82■■■□□ 2.84
UBXN11-208ENST00000421827 PRDM2Q13029 1718 aa32.79■■■□□ 2.84
UBXN11-208ENST00000421827 URB2Q14146 1524 aaKnown RBP32.71■■■□□ 2.83
UBXN11-208ENST00000421827 SUPT5HO00267 1087 aaKnown RBP32.62■■■□□ 2.81
UBXN11-208ENST00000421827 TOPBP1Q92547 1522 aa32.45■■■□□ 2.78
UBXN11-208ENST00000421827 ABCC8Q09428 1581 aa32.43■■■□□ 2.78
UBXN11-208ENST00000421827 DNMBPQ6XZF7 1577 aa32.37■■■□□ 2.77
UBXN11-208ENST00000421827 IFT140Q96RY7 1462 aa32.33■■■□□ 2.77
UBXN11-208ENST00000421827 ZNF608Q9ULD9 1512 aaPredicted RBP32.21■■■□□ 2.75
UBXN11-208ENST00000421827 POLA1P09884 1462 aaPredicted RBP32.16■■■□□ 2.74
UBXN11-208ENST00000421827 TARBP1Q13395 1621 aaKnown RBP32.11■■■□□ 2.73
UBXN11-208ENST00000421827 CUX1P39880 1505 aa32.08■■■□□ 2.73
UBXN11-208ENST00000421827 EIF4G3O43432 1585 aaKnown RBP32.04■■■□□ 2.72
UBXN11-208ENST00000421827 SOGA1O94964 1423 aa32.03■■■□□ 2.72
UBXN11-208ENST00000421827 OSCARQ8IYS5 282 aa32.03■■■□□ 2.72
UBXN11-208ENST00000421827 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
UBXN11-208ENST00000421827 RAD54L2Q9Y4B4 1467 aa32.03■■■□□ 2.72
UBXN11-208ENST00000421827 AQRO60306 1485 aaKnown RBP eCLIP32■■■□□ 2.71
UBXN11-208ENST00000421827 TDRD9Q8NDG6 1382 aaKnown RBP31.9■■■□□ 2.7
UBXN11-208ENST00000421827 WDR97A6NE52 1622 aa31.83■■■□□ 2.69
UBXN11-208ENST00000421827 WRNQ14191 1432 aaPredicted RBP eCLIP31.77■■■□□ 2.68
UBXN11-208ENST00000421827 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
UBXN11-208ENST00000421827 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
UBXN11-208ENST00000421827 FBLN2P98095 1184 aa31.7■■■□□ 2.67
UBXN11-208ENST00000421827 BIVM-ERCC5R4GMW8 1640 aa31.7■■■□□ 2.66
UBXN11-208ENST00000421827 GRIN2BQ13224 1484 aa31.69■■■□□ 2.66
UBXN11-208ENST00000421827 CHD1O14646 1710 aa31.69■■■□□ 2.66
UBXN11-208ENST00000421827 SYNJ1O43426 1573 aa31.68■■■□□ 2.66
UBXN11-208ENST00000421827 SNAPC4Q5SXM2 1469 aa31.68■■■□□ 2.66
UBXN11-208ENST00000421827 GAPVD1Q14C86 1478 aa31.65■■■□□ 2.66
UBXN11-208ENST00000421827 MAGI1Q96QZ7 1491 aaPredicted RBP31.63■■■□□ 2.65
UBXN11-208ENST00000421827 TRIM41Q8WV44 630 aa31.6■■■□□ 2.65
UBXN11-208ENST00000421827 ABCA5Q8WWZ7 1642 aa31.58■■■□□ 2.65
UBXN11-208ENST00000421827 CHMP7Q8WUX9 453 aaPredicted RBP31.57■■■□□ 2.64
UBXN11-208ENST00000421827 PBRM1Q86U86 1689 aa31.55■■■□□ 2.64
UBXN11-208ENST00000421827 SYNJ2O15056 1496 aa31.52■■■□□ 2.64
UBXN11-208ENST00000421827 RIMBP3CA6NJZ7 1639 aa31.49■■■□□ 2.63
UBXN11-208ENST00000421827 RIMBP3BA6NNM3 1639 aa31.49■■■□□ 2.63
UBXN11-208ENST00000421827 RIMBP3Q9UFD9 1639 aa31.49■■■□□ 2.63
UBXN11-208ENST00000421827 ARHGEF11O15085 1522 aa31.47■■■□□ 2.63
UBXN11-208ENST00000421827 CLASP1Q7Z460 1538 aa31.36■■■□□ 2.61
UBXN11-208ENST00000421827 ERICH3Q5RHP9 1530 aa31.32■■■□□ 2.6
UBXN11-208ENST00000421827 ADAMTS12P58397 1594 aa31.31■■■□□ 2.6
UBXN11-208ENST00000421827 FHAD1B1AJZ9 1412 aa31.28■■■□□ 2.6
UBXN11-208ENST00000421827 GRIN2AQ12879 1464 aa31.27■■■□□ 2.6
UBXN11-208ENST00000421827 CYB5RLQ6IPT4 315 aa31.23■■■□□ 2.59
UBXN11-208ENST00000421827 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
UBXN11-208ENST00000421827 NUP160Q12769 1436 aa31.15■■■□□ 2.58
UBXN11-208ENST00000421827 KIF27Q86VH2 1401 aa31.14■■■□□ 2.58
UBXN11-208ENST00000421827 CEP170Q5SW79 1584 aa31.12■■■□□ 2.57
UBXN11-208ENST00000421827 IGF1RP08069 1367 aa31.07■■■□□ 2.56
UBXN11-208ENST00000421827 CUL7Q14999 1698 aa30.95■■■□□ 2.55
UBXN11-208ENST00000421827 SHROOM2Q13796 1616 aa30.92■■■□□ 2.54
UBXN11-208ENST00000421827 ERCC6L2Q5T890 1561 aa30.91■■■□□ 2.54
UBXN11-208ENST00000421827 CARMIL1Q5VZK9 1371 aa30.88■■■□□ 2.53
UBXN11-208ENST00000421827 JPH4Q96JJ6 628 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms