RNA–Protein interactions for RNA: ENST00000421621.2

YKT6-202, Transcript of YKT6 v-SNARE homolog, humanhuman

TSL 1 (best)

Gene YKT6, Length 2,463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YKT6-202ENST00000421621 NISCHQ9Y2I1 1504 aa31.66■■■□□ 2.66
YKT6-202ENST00000421621 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
YKT6-202ENST00000421621 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
YKT6-202ENST00000421621 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
YKT6-202ENST00000421621 CCDC180Q9P1Z9 1646 aa26.84■■□□□ 1.89
YKT6-202ENST00000421621 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
YKT6-202ENST00000421621 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
YKT6-202ENST00000421621 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
YKT6-202ENST00000421621 HRCP23327 699 aa26.26■■□□□ 1.79
YKT6-202ENST00000421621 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
YKT6-202ENST00000421621 ABCC9O60706 1549 aa26.01■■□□□ 1.76
YKT6-202ENST00000421621 PCGF6Q9BYE7 350 aa25.89■■□□□ 1.74
YKT6-202ENST00000421621 LOC105371045A0A1W2PR82 267 aa25.51■■□□□ 1.67
YKT6-202ENST00000421621 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
YKT6-202ENST00000421621 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
YKT6-202ENST00000421621 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
YKT6-202ENST00000421621 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
YKT6-202ENST00000421621 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
YKT6-202ENST00000421621 NACADO15069 1562 aa25.09■■□□□ 1.61
YKT6-202ENST00000421621 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
YKT6-202ENST00000421621 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
YKT6-202ENST00000421621 PABPN1Q86U42 306 aaKnown RBP eCLIP24.92■■□□□ 1.58
YKT6-202ENST00000421621 CECR2Q9BXF3 1484 aa24.81■■□□□ 1.56
YKT6-202ENST00000421621 FAM9AQ8IZU1 332 aaPredicted RBP24.74■■□□□ 1.55
YKT6-202ENST00000421621 PELP1Q8IZL8 1130 aaKnown RBP24.66■■□□□ 1.54
YKT6-202ENST00000421621 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.53
YKT6-202ENST00000421621 UNC13AQ9UPW8 1703 aa24.53■■□□□ 1.52
YKT6-202ENST00000421621 EHMT2Q96KQ7 1210 aa24.43■■□□□ 1.5
YKT6-202ENST00000421621 WIZO95785 1651 aa24.43■■□□□ 1.5
YKT6-202ENST00000421621 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
YKT6-202ENST00000421621 SCAF1Q9H7N4 1312 aaKnown RBP24.37■■□□□ 1.49
YKT6-202ENST00000421621 EIF4G1Q04637 1599 aaKnown RBP24.34■■□□□ 1.49
YKT6-202ENST00000421621 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
YKT6-202ENST00000421621 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
YKT6-202ENST00000421621 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.47
YKT6-202ENST00000421621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.2■■□□□ 1.46
YKT6-202ENST00000421621 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
YKT6-202ENST00000421621 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
YKT6-202ENST00000421621 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.44
YKT6-202ENST00000421621 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
YKT6-202ENST00000421621 CEP162Q5TB80 1403 aa24.04■■□□□ 1.44
YKT6-202ENST00000421621 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
YKT6-202ENST00000421621 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
YKT6-202ENST00000421621 EEA1Q15075 1411 aa24.02■■□□□ 1.44
YKT6-202ENST00000421621 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
YKT6-202ENST00000421621 DIEXFQ68CQ4 756 aaKnown RBP23.99■■□□□ 1.43
YKT6-202ENST00000421621 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
YKT6-202ENST00000421621 CENPBP07199 599 aaPredicted RBP23.94■■□□□ 1.42
YKT6-202ENST00000421621 SOGA1O94964 1423 aa23.91■■□□□ 1.42
YKT6-202ENST00000421621 CSRNP3Q8WYN3 585 aa23.89■■□□□ 1.41
YKT6-202ENST00000421621 MYT1Q01538 1121 aa23.84■■□□□ 1.41
YKT6-202ENST00000421621 GOLGA3Q08378 1498 aa23.8■■□□□ 1.4
YKT6-202ENST00000421621 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
YKT6-202ENST00000421621 TTBK1Q5TCY1 1321 aaPredicted RBP23.78■■□□□ 1.4
YKT6-202ENST00000421621 GTF3C3Q9Y5Q9 886 aa23.76■■□□□ 1.39
YKT6-202ENST00000421621 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
YKT6-202ENST00000421621 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
YKT6-202ENST00000421621 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
YKT6-202ENST00000421621 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
YKT6-202ENST00000421621 CEP164Q9UPV0 1460 aa23.64■■□□□ 1.37
YKT6-202ENST00000421621 KIF21BO75037 1637 aa23.59■■□□□ 1.37
YKT6-202ENST00000421621 PEG3Q9GZU2 1588 aa23.58■■□□□ 1.37
YKT6-202ENST00000421621 CLIP1P30622 1438 aa23.53■■□□□ 1.36
YKT6-202ENST00000421621 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
YKT6-202ENST00000421621 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
YKT6-202ENST00000421621 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
YKT6-202ENST00000421621 APLP2Q06481 763 aa23.4■■□□□ 1.34
YKT6-202ENST00000421621 MIER1Q8N108 512 aa23.38■■□□□ 1.33
YKT6-202ENST00000421621 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
YKT6-202ENST00000421621 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.33
YKT6-202ENST00000421621 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
YKT6-202ENST00000421621 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
YKT6-202ENST00000421621 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
YKT6-202ENST00000421621 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
YKT6-202ENST00000421621 TOP2BQ02880 1626 aa23.21■■□□□ 1.31
YKT6-202ENST00000421621 RANGAP1P46060 587 aaPredicted RBP23.21■■□□□ 1.31
YKT6-202ENST00000421621 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
YKT6-202ENST00000421621 HMGXB3Q12766 1538 aa23.14■■□□□ 1.29
YKT6-202ENST00000421621 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
YKT6-202ENST00000421621 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
YKT6-202ENST00000421621 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
YKT6-202ENST00000421621 ARAP1Q96P48 1450 aa23.07■■□□□ 1.28
YKT6-202ENST00000421621 RRBP1Q9P2E9 1410 aaKnown RBP23.02■■□□□ 1.28
YKT6-202ENST00000421621 CUX2O14529 1486 aa22.98■■□□□ 1.27
YKT6-202ENST00000421621 KANK4Q5T7N3 995 aaPredicted RBP22.97■■□□□ 1.27
YKT6-202ENST00000421621 CFTRP13569 1480 aa22.96■■□□□ 1.27
YKT6-202ENST00000421621 NESP48681 1621 aa22.94■■□□□ 1.26
YKT6-202ENST00000421621 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
YKT6-202ENST00000421621 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
YKT6-202ENST00000421621 CCNB3Q8WWL7 1395 aa22.89■■□□□ 1.25
YKT6-202ENST00000421621 CUX1P39880 1505 aa22.87■■□□□ 1.25
YKT6-202ENST00000421621 SUPT16HQ9Y5B9 1047 aaKnown RBP22.83■■□□□ 1.24
YKT6-202ENST00000421621 ARHGAP35Q9NRY4 1499 aa22.82■■□□□ 1.24
YKT6-202ENST00000421621 MAP3K1Q13233 1512 aa22.74■■□□□ 1.23
YKT6-202ENST00000421621 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
YKT6-202ENST00000421621 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
YKT6-202ENST00000421621 MAPKBP1O60336 1514 aa22.66■■□□□ 1.22
YKT6-202ENST00000421621 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
YKT6-202ENST00000421621 ITGAEP38570 1179 aa22.64■■□□□ 1.21
YKT6-202ENST00000421621 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms