RNA–Protein interactions for RNA: ENST00000421557.1

MRPL35P3-201, Transcript of mitochondrial ribosomal protein L35 pseudogene 3, humanhuman

BASIC

Gene MRPL35P3, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35P3-201ENST00000421557 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.49
MRPL35P3-201ENST00000421557 CHIC1Q5VXU3 224 aa11.09□□□□□ -0.63
MRPL35P3-201ENST00000421557 SENP3Q9H4L4 574 aaPredicted RBP10.22□□□□□ -0.77
MRPL35P3-201ENST00000421557 PHF23Q9BUL5 403 aaPredicted RBP10.02□□□□□ -0.81
MRPL35P3-201ENST00000421557 POTEDQ86YR6 584 aa9.78□□□□□ -0.84
MRPL35P3-201ENST00000421557 FOXD1Q16676 465 aa9.62□□□□□ -0.87
MRPL35P3-201ENST00000421557 MSH5O43196 834 aa9.14□□□□□ -0.95
MRPL35P3-201ENST00000421557 PIAS4Q8N2W9 510 aaPredicted RBP8.83□□□□□ -1
MRPL35P3-201ENST00000421557 PPP6R1Q9UPN7 881 aa8.63□□□□□ -1.03
MRPL35P3-201ENST00000421557 ADRA2BP18089 450 aa8.54□□□□□ -1.04
MRPL35P3-201ENST00000421557 PLPPR3Q6T4P5 718 aa8.43□□□□□ -1.06
MRPL35P3-201ENST00000421557 CACNB1Q02641 598 aaPredicted RBP8.12□□□□□ -1.11
MRPL35P3-201ENST00000421557 DMRT2Q9Y5R5 561 aa8.05□□□□□ -1.12
MRPL35P3-201ENST00000421557 MAPK8IP2Q13387 824 aaPredicted RBP8□□□□□ -1.13
MRPL35P3-201ENST00000421557 RNF39Q9H2S5 420 aa7.79□□□□□ -1.16
MRPL35P3-201ENST00000421557 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
MRPL35P3-201ENST00000421557 DCAF8L1A6NGE4 600 aa7.67□□□□□ -1.18
MRPL35P3-201ENST00000421557 C1QBPQ07021 282 aaKnown RBP7.62□□□□□ -1.19
MRPL35P3-201ENST00000421557 HOXD11P31277 338 aaPredicted RBP7.58□□□□□ -1.2
MRPL35P3-201ENST00000421557 POTEHQ6S545 545 aa7.55□□□□□ -1.2
MRPL35P3-201ENST00000421557 DNAJC5BQ9UF47 199 aa7.4□□□□□ -1.22
MRPL35P3-201ENST00000421557 RNF216Q9NWF9 866 aaPredicted RBP7.37□□□□□ -1.23
MRPL35P3-201ENST00000421557 PPP4R3CPQ6ZMV5 832 aa7.33□□□□□ -1.24
MRPL35P3-201ENST00000421557 CNKSR2Q8WXI2 1034 aa7.3□□□□□ -1.24
MRPL35P3-201ENST00000421557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.14□□□□□ -1.27
MRPL35P3-201ENST00000421557 DSG3P32926 999 aa7.13□□□□□ -1.27
MRPL35P3-201ENST00000421557 SPINK5Q9NQ38 1064 aaPredicted RBP7.05□□□□□ -1.28
MRPL35P3-201ENST00000421557 U3KPZ7 1027 aaPredicted RBP7.02□□□□□ -1.29
MRPL35P3-201ENST00000421557 CAPN15O75808 1086 aa7□□□□□ -1.29
MRPL35P3-201ENST00000421557 NCBP3Q53F19 620 aaKnown RBP6.85□□□□□ -1.31
MRPL35P3-201ENST00000421557 SP7Q8TDD2 431 aaPredicted RBP6.85□□□□□ -1.31
MRPL35P3-201ENST00000421557 ABCB7O75027 752 aa6.83□□□□□ -1.32
MRPL35P3-201ENST00000421557 NPM3O75607 178 aaKnown RBP6.83□□□□□ -1.32
MRPL35P3-201ENST00000421557 CHRDL2Q6WN34 429 aa6.83□□□□□ -1.32
MRPL35P3-201ENST00000421557 TRHP20396 242 aaPredicted RBP6.78□□□□□ -1.32
MRPL35P3-201ENST00000421557 RBM42Q9BTD8 480 aaKnown RBP6.77□□□□□ -1.33
MRPL35P3-201ENST00000421557 ZNF219Q9P2Y4 722 aaPredicted RBP6.76□□□□□ -1.33
MRPL35P3-201ENST00000421557 APLP2Q06481 763 aa6.68□□□□□ -1.34
MRPL35P3-201ENST00000421557 SLC4A2P04920 1241 aa6.66□□□□□ -1.34
MRPL35P3-201ENST00000421557 PIP4P2Q8N4L2 257 aa6.58□□□□□ -1.36
MRPL35P3-201ENST00000421557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.57□□□□□ -1.36
MRPL35P3-201ENST00000421557 HNRNPUL2Q1KMD3 747 aaKnown RBP6.57□□□□□ -1.36
MRPL35P3-201ENST00000421557 HAX1O00165 279 aa6.54□□□□□ -1.36
MRPL35P3-201ENST00000421557 SAMD1Q6SPF0 538 aaPredicted RBP6.53□□□□□ -1.36
MRPL35P3-201ENST00000421557 AKT1S1Q96B36 256 aa6.53□□□□□ -1.36
MRPL35P3-201ENST00000421557 EVX2Q03828 476 aa6.5□□□□□ -1.37
MRPL35P3-201ENST00000421557 POLA2Q14181 598 aa6.5□□□□□ -1.37
MRPL35P3-201ENST00000421557 FXR2P51116 673 aaKnown RBP eCLIP6.47□□□□□ -1.37
MRPL35P3-201ENST00000421557 REM2Q8IYK8 340 aaPredicted RBP6.47□□□□□ -1.37
MRPL35P3-201ENST00000421557 PITPNM1O00562 1244 aa6.43□□□□□ -1.38
MRPL35P3-201ENST00000421557 LHX8Q68G74 356 aa6.4□□□□□ -1.38
MRPL35P3-201ENST00000421557 PLSCR2Q9NRY7 297 aa6.37□□□□□ -1.39
MRPL35P3-201ENST00000421557 OSCARQ8IYS5 282 aa6.34□□□□□ -1.39
MRPL35P3-201ENST00000421557 MYCNP04198 464 aaPredicted RBP6.31□□□□□ -1.4
MRPL35P3-201ENST00000421557 ZBTB12Q9Y330 459 aaPredicted RBP6.31□□□□□ -1.4
MRPL35P3-201ENST00000421557 GABBR2O75899 941 aa6.29□□□□□ -1.4
MRPL35P3-201ENST00000421557 C19orf67A6NJJ6 358 aa6.28□□□□□ -1.4
MRPL35P3-201ENST00000421557 KCNA4P22459 653 aa6.27□□□□□ -1.41
MRPL35P3-201ENST00000421557 ATF5Q9Y2D1 282 aaPredicted RBP6.24□□□□□ -1.41
MRPL35P3-201ENST00000421557 PRKAR2AP13861 404 aaKnown RBP6.23□□□□□ -1.41
MRPL35P3-201ENST00000421557 POTEIP0CG38 1075 aa6.2□□□□□ -1.42
MRPL35P3-201ENST00000421557 SPDYE2BA6NHP3 402 aa6.1□□□□□ -1.43
MRPL35P3-201ENST00000421557 SPDYE6P0CI01 402 aa6.1□□□□□ -1.43
MRPL35P3-201ENST00000421557 SPDYE2Q495Y8 402 aa6.1□□□□□ -1.43
MRPL35P3-201ENST00000421557 SPDYE1Q8NFV5 336 aaPredicted RBP6.1□□□□□ -1.43
MRPL35P3-201ENST00000421557 CLEC11AQ9Y240 323 aa6.1□□□□□ -1.43
MRPL35P3-201ENST00000421557 CHADLQ6NUI6 762 aa6.08□□□□□ -1.44
MRPL35P3-201ENST00000421557 POTEMA6NI47 508 aa6.06□□□□□ -1.44
MRPL35P3-201ENST00000421557 OTUD5Q96G74 571 aa6.04□□□□□ -1.44
MRPL35P3-201ENST00000421557 POTEGQ6S5H5 508 aa6.02□□□□□ -1.45
MRPL35P3-201ENST00000421557 CD44P16070 742 aaKnown RBP6.01□□□□□ -1.45
MRPL35P3-201ENST00000421557 SSUH2Q9Y2M2 353 aa6.01□□□□□ -1.45
MRPL35P3-201ENST00000421557 CLCN6P51797 869 aa6□□□□□ -1.45
MRPL35P3-201ENST00000421557 POTEB2H3BUK9 544 aa5.98□□□□□ -1.45
MRPL35P3-201ENST00000421557 FOXD4L1Q9NU39 408 aa5.98□□□□□ -1.45
MRPL35P3-201ENST00000421557 DCBLD2Q96PD2 775 aa5.97□□□□□ -1.45
MRPL35P3-201ENST00000421557 PCDH10Q9P2E7 1040 aa5.96□□□□□ -1.46
MRPL35P3-201ENST00000421557 FBLN2P98095 1184 aa5.94□□□□□ -1.46
MRPL35P3-201ENST00000421557 PRR29P0C7W0 189 aa5.93□□□□□ -1.46
MRPL35P3-201ENST00000421557 ZNF692Q9BU19 519 aaPredicted RBP5.93□□□□□ -1.46
MRPL35P3-201ENST00000421557 MKRN4PQ13434 485 aaPredicted RBP5.92□□□□□ -1.46
MRPL35P3-201ENST00000421557 ZNF579Q8NAF0 562 aaKnown RBP5.92□□□□□ -1.46
MRPL35P3-201ENST00000421557 FARP1Q9Y4F1 1045 aaPredicted RBP5.92□□□□□ -1.46
MRPL35P3-201ENST00000421557 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
MRPL35P3-201ENST00000421557 GALR2O43603 387 aaPredicted RBP5.88□□□□□ -1.47
MRPL35P3-201ENST00000421557 PABPN1Q86U42 306 aaKnown RBP eCLIP5.84□□□□□ -1.47
MRPL35P3-201ENST00000421557 ZRANB1Q9UGI0 708 aa5.84□□□□□ -1.47
MRPL35P3-201ENST00000421557 ATXN8OSP0DMR3 200 aa5.83□□□□□ -1.48
MRPL35P3-201ENST00000421557 POTEJP0CG39 1038 aa5.82□□□□□ -1.48
MRPL35P3-201ENST00000421557 PELP1Q8IZL8 1130 aaKnown RBP5.82□□□□□ -1.48
MRPL35P3-201ENST00000421557 ZBTB22O15209 634 aa5.79□□□□□ -1.48
MRPL35P3-201ENST00000421557 SLC4A1APQ9BWU0 796 aaKnown RBP5.78□□□□□ -1.48
MRPL35P3-201ENST00000421557 METRNQ9UJH8 293 aa5.75□□□□□ -1.49
MRPL35P3-201ENST00000421557 FAM163AQ96GL9 167 aaPredicted RBP5.74□□□□□ -1.49
MRPL35P3-201ENST00000421557 PHF12Q96QT6 1004 aa5.74□□□□□ -1.49
MRPL35P3-201ENST00000421557 ASTLQ6HA08 431 aaPredicted RBP5.73□□□□□ -1.49
MRPL35P3-201ENST00000421557 MAMSTRQ6ZN01 415 aa5.72□□□□□ -1.49
MRPL35P3-201ENST00000421557 CREBZFQ9NS37 354 aa5.72□□□□□ -1.49
MRPL35P3-201ENST00000421557 C7P10643 843 aa5.7□□□□□ -1.5
MRPL35P3-201ENST00000421557 CDAN1Q8IWY9 1227 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms