RNA–Protein interactions for RNA: ENST00000421439.1

AC018442.1-201, humanhuman

BASIC

Gene AC018442.1, Length 2,061 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC018442.1-201ENST00000421439 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
AC018442.1-201ENST00000421439 CCDC180Q9P1Z9 1646 aa28.88■■■□□ 2.21
AC018442.1-201ENST00000421439 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
AC018442.1-201ENST00000421439 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
AC018442.1-201ENST00000421439 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
AC018442.1-201ENST00000421439 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
AC018442.1-201ENST00000421439 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
AC018442.1-201ENST00000421439 ABCC9O60706 1549 aa27.08■■□□□ 1.93
AC018442.1-201ENST00000421439 NACADO15069 1562 aa26.86■■□□□ 1.89
AC018442.1-201ENST00000421439 SUPT5HO00267 1087 aaKnown RBP26.67■■□□□ 1.86
AC018442.1-201ENST00000421439 SCRIBQ14160 1630 aa26.64■■□□□ 1.86
AC018442.1-201ENST00000421439 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
AC018442.1-201ENST00000421439 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
AC018442.1-201ENST00000421439 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
AC018442.1-201ENST00000421439 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
AC018442.1-201ENST00000421439 MROH2BQ7Z745 1585 aa25.8■■□□□ 1.72
AC018442.1-201ENST00000421439 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
AC018442.1-201ENST00000421439 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
AC018442.1-201ENST00000421439 CHIC1Q5VXU3 224 aa25.7■■□□□ 1.71
AC018442.1-201ENST00000421439 PABPN1Q86U42 306 aaKnown RBP eCLIP25.66■■□□□ 1.7
AC018442.1-201ENST00000421439 WIZO95785 1651 aa25.6■■□□□ 1.69
AC018442.1-201ENST00000421439 SMARCA4P51532 1647 aa25.56■■□□□ 1.68
AC018442.1-201ENST00000421439 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
AC018442.1-201ENST00000421439 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
AC018442.1-201ENST00000421439 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
AC018442.1-201ENST00000421439 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
AC018442.1-201ENST00000421439 ATAD2BQ9ULI0 1458 aa25.09■■□□□ 1.61
AC018442.1-201ENST00000421439 TRIM41Q8WV44 630 aa25.05■■□□□ 1.6
AC018442.1-201ENST00000421439 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
AC018442.1-201ENST00000421439 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.59
AC018442.1-201ENST00000421439 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
AC018442.1-201ENST00000421439 HMGXB3Q12766 1538 aa24.77■■□□□ 1.56
AC018442.1-201ENST00000421439 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
AC018442.1-201ENST00000421439 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
AC018442.1-201ENST00000421439 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
AC018442.1-201ENST00000421439 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
AC018442.1-201ENST00000421439 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
AC018442.1-201ENST00000421439 CFTRP13569 1480 aa24.36■■□□□ 1.49
AC018442.1-201ENST00000421439 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
AC018442.1-201ENST00000421439 SOGA1O94964 1423 aa24.32■■□□□ 1.48
AC018442.1-201ENST00000421439 EEA1Q15075 1411 aa24.31■■□□□ 1.48
AC018442.1-201ENST00000421439 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
AC018442.1-201ENST00000421439 TOP2BQ02880 1626 aa24.23■■□□□ 1.47
AC018442.1-201ENST00000421439 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
AC018442.1-201ENST00000421439 CSRNP3Q8WYN3 585 aa24.21■■□□□ 1.47
AC018442.1-201ENST00000421439 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
AC018442.1-201ENST00000421439 PRDM2Q13029 1718 aa24.19■■□□□ 1.46
AC018442.1-201ENST00000421439 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
AC018442.1-201ENST00000421439 CUX1P39880 1505 aa24.09■■□□□ 1.45
AC018442.1-201ENST00000421439 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
AC018442.1-201ENST00000421439 GOLGA3Q08378 1498 aa23.99■■□□□ 1.43
AC018442.1-201ENST00000421439 PCGF6Q9BYE7 350 aa23.97■■□□□ 1.43
AC018442.1-201ENST00000421439 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.43
AC018442.1-201ENST00000421439 KIF21BO75037 1637 aa23.95■■□□□ 1.42
AC018442.1-201ENST00000421439 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
AC018442.1-201ENST00000421439 UBTFP17480 764 aaKnown RBP23.93■■□□□ 1.42
AC018442.1-201ENST00000421439 LAMC3Q9Y6N6 1575 aa23.89■■□□□ 1.41
AC018442.1-201ENST00000421439 TRIM26Q12899 539 aaPredicted RBP23.88■■□□□ 1.41
AC018442.1-201ENST00000421439 NESP48681 1621 aa23.88■■□□□ 1.41
AC018442.1-201ENST00000421439 CEP162Q5TB80 1403 aa23.88■■□□□ 1.41
AC018442.1-201ENST00000421439 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
AC018442.1-201ENST00000421439 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
AC018442.1-201ENST00000421439 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
AC018442.1-201ENST00000421439 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
AC018442.1-201ENST00000421439 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
AC018442.1-201ENST00000421439 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
AC018442.1-201ENST00000421439 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
AC018442.1-201ENST00000421439 PDS5BQ9NTI5 1447 aa23.73■■□□□ 1.39
AC018442.1-201ENST00000421439 TOPBP1Q92547 1522 aa23.71■■□□□ 1.39
AC018442.1-201ENST00000421439 CUX2O14529 1486 aa23.7■■□□□ 1.38
AC018442.1-201ENST00000421439 IGF1RP08069 1367 aa23.63■■□□□ 1.37
AC018442.1-201ENST00000421439 CLIP1P30622 1438 aa23.63■■□□□ 1.37
AC018442.1-201ENST00000421439 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
AC018442.1-201ENST00000421439 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
AC018442.1-201ENST00000421439 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.37
AC018442.1-201ENST00000421439 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
AC018442.1-201ENST00000421439 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
AC018442.1-201ENST00000421439 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
AC018442.1-201ENST00000421439 HRCP23327 699 aa23.54■■□□□ 1.36
AC018442.1-201ENST00000421439 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
AC018442.1-201ENST00000421439 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
AC018442.1-201ENST00000421439 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
AC018442.1-201ENST00000421439 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
AC018442.1-201ENST00000421439 MRC2Q9UBG0 1479 aa23.38■■□□□ 1.33
AC018442.1-201ENST00000421439 CUL7Q14999 1698 aa23.34■■□□□ 1.33
AC018442.1-201ENST00000421439 ARAP1Q96P48 1450 aa23.33■■□□□ 1.33
AC018442.1-201ENST00000421439 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.33
AC018442.1-201ENST00000421439 TDRD9Q8NDG6 1382 aaKnown RBP23.33■■□□□ 1.32
AC018442.1-201ENST00000421439 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
AC018442.1-201ENST00000421439 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
AC018442.1-201ENST00000421439 APLP2Q06481 763 aa23.3■■□□□ 1.32
AC018442.1-201ENST00000421439 ARHGAP35Q9NRY4 1499 aa23.29■■□□□ 1.32
AC018442.1-201ENST00000421439 TTBK1Q5TCY1 1321 aaPredicted RBP23.28■■□□□ 1.32
AC018442.1-201ENST00000421439 WDR62O43379 1518 aa23.23■■□□□ 1.31
AC018442.1-201ENST00000421439 ERCC6Q03468 1493 aa23.18■■□□□ 1.3
AC018442.1-201ENST00000421439 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
AC018442.1-201ENST00000421439 CTTNBP2Q8WZ74 1663 aa23.12■■□□□ 1.29
AC018442.1-201ENST00000421439 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.29
AC018442.1-201ENST00000421439 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
AC018442.1-201ENST00000421439 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms