RNA–Protein interactions for RNA: ENST00000420638.2

NBEAP3-201, Transcript of neurobeachin pseudogene 3, humanhuman

BASIC

Gene NBEAP3, Length 1,493 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBEAP3-201ENST00000420638 NISCHQ9Y2I1 1504 aa30.53■■■□□ 2.48
NBEAP3-201ENST00000420638 CCDC180Q9P1Z9 1646 aa27.22■■□□□ 1.95
NBEAP3-201ENST00000420638 ABCC9O60706 1549 aa26.8■■□□□ 1.88
NBEAP3-201ENST00000420638 RB1CC1Q8TDY2 1594 aa25.72■■□□□ 1.71
NBEAP3-201ENST00000420638 NACADO15069 1562 aa25.64■■□□□ 1.69
NBEAP3-201ENST00000420638 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
NBEAP3-201ENST00000420638 MYO15BQ96JP2 1530 aa25.45■■□□□ 1.66
NBEAP3-201ENST00000420638 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
NBEAP3-201ENST00000420638 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
NBEAP3-201ENST00000420638 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
NBEAP3-201ENST00000420638 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
NBEAP3-201ENST00000420638 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
NBEAP3-201ENST00000420638 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
NBEAP3-201ENST00000420638 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
NBEAP3-201ENST00000420638 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
NBEAP3-201ENST00000420638 EIF4G1Q04637 1599 aaKnown RBP24.3■■□□□ 1.48
NBEAP3-201ENST00000420638 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
NBEAP3-201ENST00000420638 CECR2Q9BXF3 1484 aa24.1■■□□□ 1.45
NBEAP3-201ENST00000420638 SMARCA4P51532 1647 aa23.72■■□□□ 1.39
NBEAP3-201ENST00000420638 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
NBEAP3-201ENST00000420638 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
NBEAP3-201ENST00000420638 ATAD2BQ9ULI0 1458 aa23.64■■□□□ 1.38
NBEAP3-201ENST00000420638 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
NBEAP3-201ENST00000420638 HMGXB3Q12766 1538 aa23.52■■□□□ 1.36
NBEAP3-201ENST00000420638 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
NBEAP3-201ENST00000420638 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
NBEAP3-201ENST00000420638 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
NBEAP3-201ENST00000420638 WIZO95785 1651 aa23.25■■□□□ 1.31
NBEAP3-201ENST00000420638 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
NBEAP3-201ENST00000420638 NESP48681 1621 aa23.13■■□□□ 1.29
NBEAP3-201ENST00000420638 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
NBEAP3-201ENST00000420638 LAMC3Q9Y6N6 1575 aa23.08■■□□□ 1.28
NBEAP3-201ENST00000420638 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
NBEAP3-201ENST00000420638 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
NBEAP3-201ENST00000420638 CUX2O14529 1486 aa22.95■■□□□ 1.27
NBEAP3-201ENST00000420638 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
NBEAP3-201ENST00000420638 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
NBEAP3-201ENST00000420638 THOC2Q8NI27 1593 aaKnown RBP22.82■■□□□ 1.24
NBEAP3-201ENST00000420638 CFTRP13569 1480 aa22.79■■□□□ 1.24
NBEAP3-201ENST00000420638 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
NBEAP3-201ENST00000420638 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
NBEAP3-201ENST00000420638 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
NBEAP3-201ENST00000420638 CEP164Q9UPV0 1460 aa22.69■■□□□ 1.22
NBEAP3-201ENST00000420638 PRDM2Q13029 1718 aa22.67■■□□□ 1.22
NBEAP3-201ENST00000420638 WDR62O43379 1518 aa22.61■■□□□ 1.21
NBEAP3-201ENST00000420638 DNAJC5Q9H3Z4 198 aa22.48■■□□□ 1.19
NBEAP3-201ENST00000420638 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
NBEAP3-201ENST00000420638 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
NBEAP3-201ENST00000420638 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
NBEAP3-201ENST00000420638 TOPBP1Q92547 1522 aa22.3■■□□□ 1.16
NBEAP3-201ENST00000420638 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
NBEAP3-201ENST00000420638 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
NBEAP3-201ENST00000420638 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
NBEAP3-201ENST00000420638 POLA1P09884 1462 aaPredicted RBP22.11■■□□□ 1.13
NBEAP3-201ENST00000420638 TARBP1Q13395 1621 aaKnown RBP22.08■■□□□ 1.13
NBEAP3-201ENST00000420638 CUX1P39880 1505 aa22.06■■□□□ 1.12
NBEAP3-201ENST00000420638 EIF4G3O43432 1585 aaKnown RBP22.03■■□□□ 1.12
NBEAP3-201ENST00000420638 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
NBEAP3-201ENST00000420638 SOGA1O94964 1423 aa22.03■■□□□ 1.12
NBEAP3-201ENST00000420638 RAD54L2Q9Y4B4 1467 aa22.01■■□□□ 1.11
NBEAP3-201ENST00000420638 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
NBEAP3-201ENST00000420638 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.11
NBEAP3-201ENST00000420638 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
NBEAP3-201ENST00000420638 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
NBEAP3-201ENST00000420638 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
NBEAP3-201ENST00000420638 WRNQ14191 1432 aaPredicted RBP eCLIP21.87■■□□□ 1.09
NBEAP3-201ENST00000420638 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
NBEAP3-201ENST00000420638 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
NBEAP3-201ENST00000420638 ABCA10Q8WWZ4 1543 aa21.81■■□□□ 1.08
NBEAP3-201ENST00000420638 GRIN2BQ13224 1484 aa21.79■■□□□ 1.08
NBEAP3-201ENST00000420638 CHD1O14646 1710 aa21.79■■□□□ 1.08
NBEAP3-201ENST00000420638 FBLN2P98095 1184 aa21.77■■□□□ 1.08
NBEAP3-201ENST00000420638 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.07
NBEAP3-201ENST00000420638 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.07
NBEAP3-201ENST00000420638 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
NBEAP3-201ENST00000420638 ABCA5Q8WWZ7 1642 aa21.72■■□□□ 1.07
NBEAP3-201ENST00000420638 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
NBEAP3-201ENST00000420638 CHMP7Q8WUX9 453 aaPredicted RBP21.7■■□□□ 1.06
NBEAP3-201ENST00000420638 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
NBEAP3-201ENST00000420638 TRIM41Q8WV44 630 aa21.64■■□□□ 1.06
NBEAP3-201ENST00000420638 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
NBEAP3-201ENST00000420638 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
NBEAP3-201ENST00000420638 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
NBEAP3-201ENST00000420638 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
NBEAP3-201ENST00000420638 ERICH3Q5RHP9 1530 aa21.55■■□□□ 1.04
NBEAP3-201ENST00000420638 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
NBEAP3-201ENST00000420638 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
NBEAP3-201ENST00000420638 FHAD1B1AJZ9 1412 aa21.51■■□□□ 1.03
NBEAP3-201ENST00000420638 GRIN2AQ12879 1464 aa21.5■■□□□ 1.03
NBEAP3-201ENST00000420638 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
NBEAP3-201ENST00000420638 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
NBEAP3-201ENST00000420638 NUP160Q12769 1436 aa21.42■■□□□ 1.02
NBEAP3-201ENST00000420638 ARAP1Q96P48 1450 aa21.41■■□□□ 1.02
NBEAP3-201ENST00000420638 CEP170Q5SW79 1584 aa21.39■■□□□ 1.01
NBEAP3-201ENST00000420638 IGF1RP08069 1367 aa21.37■■□□□ 1.01
NBEAP3-201ENST00000420638 CUL7Q14999 1698 aa21.32■■□□□ 1
NBEAP3-201ENST00000420638 SHROOM2Q13796 1616 aa21.27■■□□□ 1
NBEAP3-201ENST00000420638 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
NBEAP3-201ENST00000420638 ERCC6L2Q5T890 1561 aa21.22■□□□□ 0.99
NBEAP3-201ENST00000420638 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms