RNA–Protein interactions for RNA: ENST00000418047.5

AC004997.1-204, humanhuman

TSL 2

Gene AC004997.1, Length 1,781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004997.1-204ENST00000418047 NISCHQ9Y2I1 1504 aa32.45■■■□□ 2.78
AC004997.1-204ENST00000418047 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
AC004997.1-204ENST00000418047 ABCC9O60706 1549 aa27.73■■■□□ 2.03
AC004997.1-204ENST00000418047 ZCCHC6Q5VYS8 1495 aaKnown RBP27.34■■□□□ 1.97
AC004997.1-204ENST00000418047 DCAF1Q9Y4B6 1507 aa26.93■■□□□ 1.9
AC004997.1-204ENST00000418047 RB1CC1Q8TDY2 1594 aa26.7■■□□□ 1.87
AC004997.1-204ENST00000418047 NACADO15069 1562 aa26.68■■□□□ 1.86
AC004997.1-204ENST00000418047 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
AC004997.1-204ENST00000418047 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
AC004997.1-204ENST00000418047 MYO15BQ96JP2 1530 aa26.54■■□□□ 1.84
AC004997.1-204ENST00000418047 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
AC004997.1-204ENST00000418047 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
AC004997.1-204ENST00000418047 BICRAQ9NZM4 1560 aa25.92■■□□□ 1.74
AC004997.1-204ENST00000418047 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
AC004997.1-204ENST00000418047 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
AC004997.1-204ENST00000418047 DNAJC5BQ9UF47 199 aa25.4■■□□□ 1.66
AC004997.1-204ENST00000418047 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
AC004997.1-204ENST00000418047 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
AC004997.1-204ENST00000418047 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
AC004997.1-204ENST00000418047 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
AC004997.1-204ENST00000418047 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
AC004997.1-204ENST00000418047 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
AC004997.1-204ENST00000418047 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
AC004997.1-204ENST00000418047 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
AC004997.1-204ENST00000418047 WIZO95785 1651 aa24.79■■□□□ 1.56
AC004997.1-204ENST00000418047 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
AC004997.1-204ENST00000418047 ATAD2BQ9ULI0 1458 aa24.63■■□□□ 1.53
AC004997.1-204ENST00000418047 SMARCA2P51531 1590 aa24.61■■□□□ 1.53
AC004997.1-204ENST00000418047 NCAPD3P42695 1498 aa24.61■■□□□ 1.53
AC004997.1-204ENST00000418047 PEG3Q9GZU2 1588 aa24.6■■□□□ 1.53
AC004997.1-204ENST00000418047 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
AC004997.1-204ENST00000418047 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
AC004997.1-204ENST00000418047 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
AC004997.1-204ENST00000418047 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
AC004997.1-204ENST00000418047 NESP48681 1621 aa24.02■■□□□ 1.44
AC004997.1-204ENST00000418047 LAMC3Q9Y6N6 1575 aa23.97■■□□□ 1.43
AC004997.1-204ENST00000418047 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
AC004997.1-204ENST00000418047 ERCC6Q03468 1493 aa23.89■■□□□ 1.42
AC004997.1-204ENST00000418047 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
AC004997.1-204ENST00000418047 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
AC004997.1-204ENST00000418047 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
AC004997.1-204ENST00000418047 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
AC004997.1-204ENST00000418047 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
AC004997.1-204ENST00000418047 CFTRP13569 1480 aa23.77■■□□□ 1.4
AC004997.1-204ENST00000418047 EEA1Q15075 1411 aa23.74■■□□□ 1.39
AC004997.1-204ENST00000418047 FAM9AQ8IZU1 332 aaPredicted RBP23.73■■□□□ 1.39
AC004997.1-204ENST00000418047 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
AC004997.1-204ENST00000418047 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
AC004997.1-204ENST00000418047 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
AC004997.1-204ENST00000418047 CUX2O14529 1486 aa23.63■■□□□ 1.37
AC004997.1-204ENST00000418047 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
AC004997.1-204ENST00000418047 CEP164Q9UPV0 1460 aa23.59■■□□□ 1.37
AC004997.1-204ENST00000418047 TOP2BQ02880 1626 aa23.57■■□□□ 1.36
AC004997.1-204ENST00000418047 SOGA1O94964 1423 aa23.57■■□□□ 1.36
AC004997.1-204ENST00000418047 MRC2Q9UBG0 1479 aa23.54■■□□□ 1.36
AC004997.1-204ENST00000418047 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
AC004997.1-204ENST00000418047 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
AC004997.1-204ENST00000418047 WDR62O43379 1518 aa23.49■■□□□ 1.35
AC004997.1-204ENST00000418047 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
AC004997.1-204ENST00000418047 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.34
AC004997.1-204ENST00000418047 CUX1P39880 1505 aa23.39■■□□□ 1.33
AC004997.1-204ENST00000418047 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
AC004997.1-204ENST00000418047 GOLGA3Q08378 1498 aa23.35■■□□□ 1.33
AC004997.1-204ENST00000418047 KIF21BO75037 1637 aa23.33■■□□□ 1.32
AC004997.1-204ENST00000418047 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
AC004997.1-204ENST00000418047 TOPBP1Q92547 1522 aa23.26■■□□□ 1.31
AC004997.1-204ENST00000418047 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
AC004997.1-204ENST00000418047 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
AC004997.1-204ENST00000418047 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
AC004997.1-204ENST00000418047 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
AC004997.1-204ENST00000418047 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
AC004997.1-204ENST00000418047 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
AC004997.1-204ENST00000418047 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
AC004997.1-204ENST00000418047 PRXQ9BXM0 1461 aa23.14■■□□□ 1.3
AC004997.1-204ENST00000418047 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
AC004997.1-204ENST00000418047 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
AC004997.1-204ENST00000418047 FGD5Q6ZNL6 1462 aa23.08■■□□□ 1.29
AC004997.1-204ENST00000418047 POLA1P09884 1462 aaPredicted RBP23.07■■□□□ 1.28
AC004997.1-204ENST00000418047 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
AC004997.1-204ENST00000418047 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
AC004997.1-204ENST00000418047 CLIP1P30622 1438 aa22.98■■□□□ 1.27
AC004997.1-204ENST00000418047 IGF1RP08069 1367 aa22.96■■□□□ 1.27
AC004997.1-204ENST00000418047 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
AC004997.1-204ENST00000418047 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
AC004997.1-204ENST00000418047 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
AC004997.1-204ENST00000418047 HRCP23327 699 aa22.89■■□□□ 1.26
AC004997.1-204ENST00000418047 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
AC004997.1-204ENST00000418047 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
AC004997.1-204ENST00000418047 VPS8Q8N3P4 1428 aa22.84■■□□□ 1.25
AC004997.1-204ENST00000418047 CARMIL1Q5VZK9 1371 aa22.83■■□□□ 1.25
AC004997.1-204ENST00000418047 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.24
AC004997.1-204ENST00000418047 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
AC004997.1-204ENST00000418047 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
AC004997.1-204ENST00000418047 CUL7Q14999 1698 aa22.72■■□□□ 1.23
AC004997.1-204ENST00000418047 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
AC004997.1-204ENST00000418047 GAPVD1Q14C86 1478 aa22.7■■□□□ 1.22
AC004997.1-204ENST00000418047 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
AC004997.1-204ENST00000418047 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
AC004997.1-204ENST00000418047 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
AC004997.1-204ENST00000418047 CHD1O14646 1710 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms