RNA–Protein interactions for RNA: ENST00000417737.5

KIF3C-203, Transcript of kinesin family member 3C, humanhuman

TSL 1 (best)

Gene KIF3C, Length 5,452 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3C-203ENST00000417737 NISCHQ9Y2I1 1504 aa24.59■■□□□ 1.53
KIF3C-203ENST00000417737 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
KIF3C-203ENST00000417737 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
KIF3C-203ENST00000417737 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
KIF3C-203ENST00000417737 FAM9AQ8IZU1 332 aaPredicted RBP21.95■■□□□ 1.1
KIF3C-203ENST00000417737 MYT1Q01538 1121 aa21.82■■□□□ 1.08
KIF3C-203ENST00000417737 PELP1Q8IZL8 1130 aaKnown RBP21.59■■□□□ 1.05
KIF3C-203ENST00000417737 APLP2Q06481 763 aa21.41■■□□□ 1.02
KIF3C-203ENST00000417737 ABCC9O60706 1549 aa21.27■■□□□ 1
KIF3C-203ENST00000417737 EHMT2Q96KQ7 1210 aa21.01■□□□□ 0.95
KIF3C-203ENST00000417737 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
KIF3C-203ENST00000417737 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
KIF3C-203ENST00000417737 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
KIF3C-203ENST00000417737 PABPN1Q86U42 306 aaKnown RBP eCLIP20.65■□□□□ 0.9
KIF3C-203ENST00000417737 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
KIF3C-203ENST00000417737 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
KIF3C-203ENST00000417737 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.88
KIF3C-203ENST00000417737 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
KIF3C-203ENST00000417737 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
KIF3C-203ENST00000417737 ERICH6Q7L0X2 663 aa20.39■□□□□ 0.85
KIF3C-203ENST00000417737 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
KIF3C-203ENST00000417737 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
KIF3C-203ENST00000417737 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
KIF3C-203ENST00000417737 NACADO15069 1562 aa20.31■□□□□ 0.84
KIF3C-203ENST00000417737 SCRIBQ14160 1630 aa20.27■□□□□ 0.83
KIF3C-203ENST00000417737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
KIF3C-203ENST00000417737 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
KIF3C-203ENST00000417737 CCER1Q8TC90 406 aaPredicted RBP20.2■□□□□ 0.82
KIF3C-203ENST00000417737 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
KIF3C-203ENST00000417737 YTHDC1Q96MU7 727 aaKnown RBP20.06■□□□□ 0.8
KIF3C-203ENST00000417737 NEFLP07196 543 aa19.91■□□□□ 0.78
KIF3C-203ENST00000417737 DCAF1Q9Y4B6 1507 aa19.89■□□□□ 0.77
KIF3C-203ENST00000417737 HRCP23327 699 aa19.88■□□□□ 0.77
KIF3C-203ENST00000417737 FBLN2P98095 1184 aa19.84■□□□□ 0.77
KIF3C-203ENST00000417737 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
KIF3C-203ENST00000417737 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
KIF3C-203ENST00000417737 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
KIF3C-203ENST00000417737 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
KIF3C-203ENST00000417737 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
KIF3C-203ENST00000417737 BAZ1BQ9UIG0 1483 aaKnown RBP19.61■□□□□ 0.73
KIF3C-203ENST00000417737 MYO15BQ96JP2 1530 aa19.6■□□□□ 0.73
KIF3C-203ENST00000417737 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.72
KIF3C-203ENST00000417737 ITGAEP38570 1179 aa19.51■□□□□ 0.71
KIF3C-203ENST00000417737 CSRNP3Q8WYN3 585 aa19.48■□□□□ 0.71
KIF3C-203ENST00000417737 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
KIF3C-203ENST00000417737 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
KIF3C-203ENST00000417737 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
KIF3C-203ENST00000417737 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
KIF3C-203ENST00000417737 ESF1Q9H501 851 aaKnown RBP19.36■□□□□ 0.69
KIF3C-203ENST00000417737 TRIM52Q96A61 297 aa19.32■□□□□ 0.68
KIF3C-203ENST00000417737 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
KIF3C-203ENST00000417737 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
KIF3C-203ENST00000417737 EEA1Q15075 1411 aa19.28■□□□□ 0.68
KIF3C-203ENST00000417737 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.67
KIF3C-203ENST00000417737 DIEXFQ68CQ4 756 aaKnown RBP19.22■□□□□ 0.67
KIF3C-203ENST00000417737 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
KIF3C-203ENST00000417737 POLR3GLQ9BT43 218 aa19.19■□□□□ 0.66
KIF3C-203ENST00000417737 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
KIF3C-203ENST00000417737 ACIN1Q9UKV3 1341 aaKnown RBP19.13■□□□□ 0.65
KIF3C-203ENST00000417737 KIF27Q86VH2 1401 aa19.12■□□□□ 0.65
KIF3C-203ENST00000417737 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
KIF3C-203ENST00000417737 WRNQ14191 1432 aaPredicted RBP eCLIP19.11■□□□□ 0.65
KIF3C-203ENST00000417737 RTL5Q5HYW3 569 aaPredicted RBP19.1■□□□□ 0.65
KIF3C-203ENST00000417737 GTF3C3Q9Y5Q9 886 aa19.1■□□□□ 0.65
KIF3C-203ENST00000417737 ZNF777Q9ULD5 760 aaPredicted RBP19.08■□□□□ 0.64
KIF3C-203ENST00000417737 BCANQ96GW7 911 aa19.06■□□□□ 0.64
KIF3C-203ENST00000417737 CNGB1Q14028 1251 aaPredicted RBP19.05■□□□□ 0.64
KIF3C-203ENST00000417737 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
KIF3C-203ENST00000417737 ARID3CA6NKF2 412 aa18.98■□□□□ 0.63
KIF3C-203ENST00000417737 STAG3Q9UJ98 1225 aa18.97■□□□□ 0.63
KIF3C-203ENST00000417737 GOLGA3Q08378 1498 aa18.96■□□□□ 0.63
KIF3C-203ENST00000417737 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
KIF3C-203ENST00000417737 TSPY4P0CV99 314 aa18.93■□□□□ 0.62
KIF3C-203ENST00000417737 TSPY10P0CW01 314 aa18.93■□□□□ 0.62
KIF3C-203ENST00000417737 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
KIF3C-203ENST00000417737 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
KIF3C-203ENST00000417737 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
KIF3C-203ENST00000417737 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
KIF3C-203ENST00000417737 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
KIF3C-203ENST00000417737 CLIP1P30622 1438 aa18.83■□□□□ 0.6
KIF3C-203ENST00000417737 NEFMP07197 916 aa18.82■□□□□ 0.6
KIF3C-203ENST00000417737 CLSPNQ9HAW4 1339 aa18.82■□□□□ 0.6
KIF3C-203ENST00000417737 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
KIF3C-203ENST00000417737 CADPSQ9ULU8 1353 aa18.8■□□□□ 0.6
KIF3C-203ENST00000417737 CARMIL2Q6F5E8 1435 aa18.79■□□□□ 0.6
KIF3C-203ENST00000417737 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
KIF3C-203ENST00000417737 MROH2BQ7Z745 1585 aa18.78■□□□□ 0.6
KIF3C-203ENST00000417737 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
KIF3C-203ENST00000417737 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
KIF3C-203ENST00000417737 CUX2O14529 1486 aa18.74■□□□□ 0.59
KIF3C-203ENST00000417737 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
KIF3C-203ENST00000417737 GLIPR1L2Q4G1C9 344 aa18.73■□□□□ 0.59
KIF3C-203ENST00000417737 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
KIF3C-203ENST00000417737 SOGA1O94964 1423 aa18.71■□□□□ 0.59
KIF3C-203ENST00000417737 CHGAP10645 457 aaKnown RBP18.7■□□□□ 0.58
KIF3C-203ENST00000417737 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
KIF3C-203ENST00000417737 KCNH8Q96L42 1107 aa18.67■□□□□ 0.58
KIF3C-203ENST00000417737 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
KIF3C-203ENST00000417737 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
KIF3C-203ENST00000417737 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms