RNA–Protein interactions for RNA: ENST00000417666.1

TNRC18P2-201, Transcript of trinucleotide repeat containing 18 pseudogene 2, humanhuman

BASIC

Gene TNRC18P2, Length 2,714 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P2-201ENST00000417666 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
TNRC18P2-201ENST00000417666 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
TNRC18P2-201ENST00000417666 SUPT5HO00267 1087 aaKnown RBP26.79■■□□□ 1.88
TNRC18P2-201ENST00000417666 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
TNRC18P2-201ENST00000417666 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
TNRC18P2-201ENST00000417666 MYO15BQ96JP2 1530 aa26.36■■□□□ 1.81
TNRC18P2-201ENST00000417666 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
TNRC18P2-201ENST00000417666 HRCP23327 699 aa26.2■■□□□ 1.78
TNRC18P2-201ENST00000417666 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
TNRC18P2-201ENST00000417666 PCGF6Q9BYE7 350 aa25.87■■□□□ 1.73
TNRC18P2-201ENST00000417666 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
TNRC18P2-201ENST00000417666 PPARGC1BQ86YN6 1023 aaKnown RBP25.62■■□□□ 1.69
TNRC18P2-201ENST00000417666 LOC105371045A0A1W2PR82 267 aa25.52■■□□□ 1.68
TNRC18P2-201ENST00000417666 ABCC9O60706 1549 aa25.29■■□□□ 1.64
TNRC18P2-201ENST00000417666 TRIM26Q12899 539 aaPredicted RBP25.26■■□□□ 1.63
TNRC18P2-201ENST00000417666 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
TNRC18P2-201ENST00000417666 SCRIBQ14160 1630 aa24.96■■□□□ 1.59
TNRC18P2-201ENST00000417666 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
TNRC18P2-201ENST00000417666 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
TNRC18P2-201ENST00000417666 ZEB1P37275 1124 aaPredicted RBP24.85■■□□□ 1.57
TNRC18P2-201ENST00000417666 FAM9AQ8IZU1 332 aaPredicted RBP24.74■■□□□ 1.55
TNRC18P2-201ENST00000417666 PELP1Q8IZL8 1130 aaKnown RBP24.7■■□□□ 1.55
TNRC18P2-201ENST00000417666 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
TNRC18P2-201ENST00000417666 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
TNRC18P2-201ENST00000417666 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
TNRC18P2-201ENST00000417666 SCAF1Q9H7N4 1312 aaKnown RBP24.43■■□□□ 1.5
TNRC18P2-201ENST00000417666 WIZO95785 1651 aa24.39■■□□□ 1.49
TNRC18P2-201ENST00000417666 NACADO15069 1562 aa24.39■■□□□ 1.49
TNRC18P2-201ENST00000417666 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
TNRC18P2-201ENST00000417666 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
TNRC18P2-201ENST00000417666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.2■■□□□ 1.47
TNRC18P2-201ENST00000417666 CCER1Q8TC90 406 aaPredicted RBP24.12■■□□□ 1.45
TNRC18P2-201ENST00000417666 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
TNRC18P2-201ENST00000417666 ACIN1Q9UKV3 1341 aaKnown RBP24.02■■□□□ 1.44
TNRC18P2-201ENST00000417666 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
TNRC18P2-201ENST00000417666 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
TNRC18P2-201ENST00000417666 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
TNRC18P2-201ENST00000417666 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
TNRC18P2-201ENST00000417666 CEP162Q5TB80 1403 aa23.94■■□□□ 1.42
TNRC18P2-201ENST00000417666 DIEXFQ68CQ4 756 aaKnown RBP23.9■■□□□ 1.42
TNRC18P2-201ENST00000417666 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
TNRC18P2-201ENST00000417666 TTBK1Q5TCY1 1321 aaPredicted RBP23.87■■□□□ 1.41
TNRC18P2-201ENST00000417666 SMARCA4P51532 1647 aa23.86■■□□□ 1.41
TNRC18P2-201ENST00000417666 SOGA1O94964 1423 aa23.85■■□□□ 1.41
TNRC18P2-201ENST00000417666 TNIKQ9UKE5 1360 aa23.84■■□□□ 1.41
TNRC18P2-201ENST00000417666 MYT1Q01538 1121 aa23.78■■□□□ 1.4
TNRC18P2-201ENST00000417666 CENPBP07199 599 aaPredicted RBP23.75■■□□□ 1.39
TNRC18P2-201ENST00000417666 GTF3C3Q9Y5Q9 886 aa23.75■■□□□ 1.39
TNRC18P2-201ENST00000417666 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
TNRC18P2-201ENST00000417666 EEA1Q15075 1411 aa23.74■■□□□ 1.39
TNRC18P2-201ENST00000417666 CSRNP3Q8WYN3 585 aa23.7■■□□□ 1.39
TNRC18P2-201ENST00000417666 UNC13AQ9UPW8 1703 aa23.64■■□□□ 1.38
TNRC18P2-201ENST00000417666 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
TNRC18P2-201ENST00000417666 GOLGA3Q08378 1498 aa23.63■■□□□ 1.37
TNRC18P2-201ENST00000417666 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
TNRC18P2-201ENST00000417666 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
TNRC18P2-201ENST00000417666 KIF21BO75037 1637 aa23.44■■□□□ 1.34
TNRC18P2-201ENST00000417666 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
TNRC18P2-201ENST00000417666 SYNJ1O43426 1573 aa23.42■■□□□ 1.34
TNRC18P2-201ENST00000417666 HNRNPUL2Q1KMD3 747 aaKnown RBP23.4■■□□□ 1.34
TNRC18P2-201ENST00000417666 CLIP1P30622 1438 aa23.39■■□□□ 1.33
TNRC18P2-201ENST00000417666 YTHDC1Q96MU7 727 aaKnown RBP23.38■■□□□ 1.33
TNRC18P2-201ENST00000417666 MIER1Q8N108 512 aa23.37■■□□□ 1.33
TNRC18P2-201ENST00000417666 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
TNRC18P2-201ENST00000417666 VPS8Q8N3P4 1428 aa23.34■■□□□ 1.33
TNRC18P2-201ENST00000417666 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
TNRC18P2-201ENST00000417666 BAZ1BQ9UIG0 1483 aaKnown RBP23.28■■□□□ 1.32
TNRC18P2-201ENST00000417666 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
TNRC18P2-201ENST00000417666 APLP2Q06481 763 aa23.16■■□□□ 1.3
TNRC18P2-201ENST00000417666 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
TNRC18P2-201ENST00000417666 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
TNRC18P2-201ENST00000417666 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
TNRC18P2-201ENST00000417666 DHX57Q6P158 1386 aaKnown RBP23.04■■□□□ 1.28
TNRC18P2-201ENST00000417666 CLSPNQ9HAW4 1339 aa23.03■■□□□ 1.28
TNRC18P2-201ENST00000417666 ARAP1Q96P48 1450 aa23■■□□□ 1.27
TNRC18P2-201ENST00000417666 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
TNRC18P2-201ENST00000417666 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
TNRC18P2-201ENST00000417666 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
TNRC18P2-201ENST00000417666 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
TNRC18P2-201ENST00000417666 RRBP1Q9P2E9 1410 aaKnown RBP22.87■■□□□ 1.25
TNRC18P2-201ENST00000417666 CUX2O14529 1486 aa22.82■■□□□ 1.24
TNRC18P2-201ENST00000417666 SUPT16HQ9Y5B9 1047 aaKnown RBP22.79■■□□□ 1.24
TNRC18P2-201ENST00000417666 CUX1P39880 1505 aa22.77■■□□□ 1.24
TNRC18P2-201ENST00000417666 CCNB3Q8WWL7 1395 aa22.73■■□□□ 1.23
TNRC18P2-201ENST00000417666 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
TNRC18P2-201ENST00000417666 ARHGAP35Q9NRY4 1499 aa22.71■■□□□ 1.23
TNRC18P2-201ENST00000417666 MAPKBP1O60336 1514 aa22.63■■□□□ 1.21
TNRC18P2-201ENST00000417666 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
TNRC18P2-201ENST00000417666 ITGAEP38570 1179 aa22.61■■□□□ 1.21
TNRC18P2-201ENST00000417666 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
TNRC18P2-201ENST00000417666 NCAPD3P42695 1498 aa22.58■■□□□ 1.21
TNRC18P2-201ENST00000417666 KCNH8Q96L42 1107 aa22.56■■□□□ 1.2
TNRC18P2-201ENST00000417666 TSHZ2Q9NRE2 1034 aa22.54■■□□□ 1.2
TNRC18P2-201ENST00000417666 TIAM1Q13009 1591 aa22.54■■□□□ 1.2
TNRC18P2-201ENST00000417666 CFTRP13569 1480 aa22.54■■□□□ 1.2
TNRC18P2-201ENST00000417666 MAP3K1Q13233 1512 aa22.51■■□□□ 1.19
TNRC18P2-201ENST00000417666 BCL11AQ9H165 835 aa22.49■■□□□ 1.19
TNRC18P2-201ENST00000417666 SETD5Q9C0A6 1442 aa22.47■■□□□ 1.19
TNRC18P2-201ENST00000417666 IGF1RP08069 1367 aa22.45■■□□□ 1.18
TNRC18P2-201ENST00000417666 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms