RNA–Protein interactions for RNA: ENST00000416232.5

AC004890.2-205, humanhuman

TSL 2 BASIC

Gene AC004890.2, Length 2,804 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004890.2-205ENST00000416232 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
AC004890.2-205ENST00000416232 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
AC004890.2-205ENST00000416232 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
AC004890.2-205ENST00000416232 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
AC004890.2-205ENST00000416232 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
AC004890.2-205ENST00000416232 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
AC004890.2-205ENST00000416232 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
AC004890.2-205ENST00000416232 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
AC004890.2-205ENST00000416232 HRCP23327 699 aa24.31■■□□□ 1.48
AC004890.2-205ENST00000416232 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.46
AC004890.2-205ENST00000416232 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.46
AC004890.2-205ENST00000416232 LOC105371045A0A1W2PR82 267 aa24.03■■□□□ 1.44
AC004890.2-205ENST00000416232 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.37
AC004890.2-205ENST00000416232 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
AC004890.2-205ENST00000416232 TRIM26Q12899 539 aaPredicted RBP23.46■■□□□ 1.35
AC004890.2-205ENST00000416232 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
AC004890.2-205ENST00000416232 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
AC004890.2-205ENST00000416232 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
AC004890.2-205ENST00000416232 ABCC9O60706 1549 aa23.19■■□□□ 1.3
AC004890.2-205ENST00000416232 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
AC004890.2-205ENST00000416232 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
AC004890.2-205ENST00000416232 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
AC004890.2-205ENST00000416232 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
AC004890.2-205ENST00000416232 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
AC004890.2-205ENST00000416232 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
AC004890.2-205ENST00000416232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.77■■□□□ 1.24
AC004890.2-205ENST00000416232 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
AC004890.2-205ENST00000416232 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
AC004890.2-205ENST00000416232 WIZO95785 1651 aa22.6■■□□□ 1.21
AC004890.2-205ENST00000416232 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
AC004890.2-205ENST00000416232 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
AC004890.2-205ENST00000416232 NACADO15069 1562 aa22.35■■□□□ 1.17
AC004890.2-205ENST00000416232 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
AC004890.2-205ENST00000416232 DIEXFQ68CQ4 756 aaKnown RBP22.31■■□□□ 1.16
AC004890.2-205ENST00000416232 PELP1Q8IZL8 1130 aaKnown RBP22.3■■□□□ 1.16
AC004890.2-205ENST00000416232 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
AC004890.2-205ENST00000416232 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
AC004890.2-205ENST00000416232 SOGA1O94964 1423 aa22.23■■□□□ 1.15
AC004890.2-205ENST00000416232 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
AC004890.2-205ENST00000416232 GTF3C3Q9Y5Q9 886 aa22.22■■□□□ 1.15
AC004890.2-205ENST00000416232 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
AC004890.2-205ENST00000416232 CEP162Q5TB80 1403 aa22.2■■□□□ 1.14
AC004890.2-205ENST00000416232 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
AC004890.2-205ENST00000416232 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
AC004890.2-205ENST00000416232 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
AC004890.2-205ENST00000416232 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
AC004890.2-205ENST00000416232 HNRNPUL2Q1KMD3 747 aaKnown RBP22.06■■□□□ 1.12
AC004890.2-205ENST00000416232 RANGAP1P46060 587 aaPredicted RBP22.05■■□□□ 1.12
AC004890.2-205ENST00000416232 TOP2AP11388 1531 aaKnown RBP22.03■■□□□ 1.12
AC004890.2-205ENST00000416232 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
AC004890.2-205ENST00000416232 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
AC004890.2-205ENST00000416232 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
AC004890.2-205ENST00000416232 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
AC004890.2-205ENST00000416232 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
AC004890.2-205ENST00000416232 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
AC004890.2-205ENST00000416232 MIER1Q8N108 512 aa21.86■■□□□ 1.09
AC004890.2-205ENST00000416232 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
AC004890.2-205ENST00000416232 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
AC004890.2-205ENST00000416232 EEA1Q15075 1411 aa21.75■■□□□ 1.07
AC004890.2-205ENST00000416232 CLIP1P30622 1438 aa21.71■■□□□ 1.07
AC004890.2-205ENST00000416232 APLP2Q06481 763 aa21.69■■□□□ 1.06
AC004890.2-205ENST00000416232 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
AC004890.2-205ENST00000416232 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
AC004890.2-205ENST00000416232 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
AC004890.2-205ENST00000416232 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
AC004890.2-205ENST00000416232 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
AC004890.2-205ENST00000416232 KIF21BO75037 1637 aa21.47■■□□□ 1.03
AC004890.2-205ENST00000416232 KANK4Q5T7N3 995 aaPredicted RBP21.45■■□□□ 1.02
AC004890.2-205ENST00000416232 ITGAEP38570 1179 aa21.43■■□□□ 1.02
AC004890.2-205ENST00000416232 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
AC004890.2-205ENST00000416232 ATAD2BQ9ULI0 1458 aa21.38■■□□□ 1.01
AC004890.2-205ENST00000416232 DHX57Q6P158 1386 aaKnown RBP21.36■■□□□ 1.01
AC004890.2-205ENST00000416232 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
AC004890.2-205ENST00000416232 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
AC004890.2-205ENST00000416232 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
AC004890.2-205ENST00000416232 SUPT16HQ9Y5B9 1047 aaKnown RBP21.22■□□□□ 0.99
AC004890.2-205ENST00000416232 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
AC004890.2-205ENST00000416232 PRXQ9BXM0 1461 aa21.15■□□□□ 0.98
AC004890.2-205ENST00000416232 MYT1Q01538 1121 aa21.13■□□□□ 0.97
AC004890.2-205ENST00000416232 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
AC004890.2-205ENST00000416232 BCANQ96GW7 911 aa21.09■□□□□ 0.97
AC004890.2-205ENST00000416232 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.97
AC004890.2-205ENST00000416232 CUX1P39880 1505 aa21.06■□□□□ 0.96
AC004890.2-205ENST00000416232 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
AC004890.2-205ENST00000416232 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
AC004890.2-205ENST00000416232 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
AC004890.2-205ENST00000416232 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
AC004890.2-205ENST00000416232 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
AC004890.2-205ENST00000416232 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
AC004890.2-205ENST00000416232 P3H3Q8IVL6 736 aa21.02■□□□□ 0.96
AC004890.2-205ENST00000416232 ARHGAP35Q9NRY4 1499 aa21.02■□□□□ 0.96
AC004890.2-205ENST00000416232 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
AC004890.2-205ENST00000416232 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
AC004890.2-205ENST00000416232 DDX10Q13206 875 aaKnown RBP21■□□□□ 0.95
AC004890.2-205ENST00000416232 FAM50AQ14320 339 aaKnown RBP21■□□□□ 0.95
AC004890.2-205ENST00000416232 TSHZ2Q9NRE2 1034 aa20.97■□□□□ 0.95
AC004890.2-205ENST00000416232 MAPKBP1O60336 1514 aa20.89■□□□□ 0.94
AC004890.2-205ENST00000416232 FKBP8Q14318 412 aa20.87■□□□□ 0.93
AC004890.2-205ENST00000416232 CUX2O14529 1486 aa20.87■□□□□ 0.93
AC004890.2-205ENST00000416232 PHLDB1Q86UU1 1377 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms