RNA–Protein interactions for RNA: ENST00000414253.5

FAAP20-206, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-206ENST00000414253 NISCHQ9Y2I1 1504 aa51.96■■■■■ 5.91
FAAP20-206ENST00000414253 CCDC180Q9P1Z9 1646 aa44.63■■■■■ 4.73
FAAP20-206ENST00000414253 ZCCHC6Q5VYS8 1495 aaKnown RBP43.85■■■■■ 4.61
FAAP20-206ENST00000414253 SHROOM4Q9ULL8 1493 aa43.51■■■■■ 4.56
FAAP20-206ENST00000414253 DCAF8L2P0C7V8 631 aa42.97■■■■■ 4.47
FAAP20-206ENST00000414253 DCAF1Q9Y4B6 1507 aa42.8■■■■■ 4.44
FAAP20-206ENST00000414253 SUPT5HO00267 1087 aaKnown RBP42.4■■■■■ 4.38
FAAP20-206ENST00000414253 ABCC9O60706 1549 aa42.13■■■■■ 4.33
FAAP20-206ENST00000414253 MYO15BQ96JP2 1530 aa41.83■■■■■ 4.29
FAAP20-206ENST00000414253 NACADO15069 1562 aa41.49■■■■■ 4.23
FAAP20-206ENST00000414253 SCRIBQ14160 1630 aa41.47■■■■■ 4.23
FAAP20-206ENST00000414253 CHIC1Q5VXU3 224 aa41.08■■■■■ 4.17
FAAP20-206ENST00000414253 RB1CC1Q8TDY2 1594 aa41.04■■■■■ 4.16
FAAP20-206ENST00000414253 RSF1Q96T23 1441 aaPredicted RBP40.82■■■■■ 4.12
FAAP20-206ENST00000414253 HRCP23327 699 aa40.54■■■■■ 4.08
FAAP20-206ENST00000414253 CECR2Q9BXF3 1484 aa40.44■■■■■ 4.06
FAAP20-206ENST00000414253 UNC13AQ9UPW8 1703 aa40.35■■■■■ 4.05
FAAP20-206ENST00000414253 MROH2BQ7Z745 1585 aa40.29■■■■■ 4.04
FAAP20-206ENST00000414253 PCGF6Q9BYE7 350 aa40.08■■■■■ 4.01
FAAP20-206ENST00000414253 WIZO95785 1651 aa40.05■■■■■ 4
FAAP20-206ENST00000414253 PABPN1Q86U42 306 aaKnown RBP eCLIP40.01■■■■■ 4
FAAP20-206ENST00000414253 BAZ1AQ9NRL2 1556 aaPredicted RBP39.99■■■■□ 3.99
FAAP20-206ENST00000414253 BICRAQ9NZM4 1560 aa39.96■■■■□ 3.99
FAAP20-206ENST00000414253 SMARCA4P51532 1647 aa39.71■■■■□ 3.95
FAAP20-206ENST00000414253 LOC105371045A0A1W2PR82 267 aa39.7■■■■□ 3.95
FAAP20-206ENST00000414253 TRIM41Q8WV44 630 aa39.66■■■■□ 3.94
FAAP20-206ENST00000414253 TOP2AP11388 1531 aaKnown RBP39.51■■■■□ 3.91
FAAP20-206ENST00000414253 PPARGC1BQ86YN6 1023 aaKnown RBP39.49■■■■□ 3.91
FAAP20-206ENST00000414253 EIF4G1Q04637 1599 aaKnown RBP39.34■■■■□ 3.89
FAAP20-206ENST00000414253 TRIM26Q12899 539 aaPredicted RBP39.28■■■■□ 3.88
FAAP20-206ENST00000414253 CCDC88BA6NC98 1476 aa39.24■■■■□ 3.87
FAAP20-206ENST00000414253 SMARCA2P51531 1590 aa39.24■■■■□ 3.87
FAAP20-206ENST00000414253 FAM9AQ8IZU1 332 aaPredicted RBP39.14■■■■□ 3.86
FAAP20-206ENST00000414253 PEG3Q9GZU2 1588 aa39.08■■■■□ 3.85
FAAP20-206ENST00000414253 ATAD2BQ9ULI0 1458 aa38.91■■■■□ 3.82
FAAP20-206ENST00000414253 ABCC8Q09428 1581 aa38.86■■■■□ 3.81
FAAP20-206ENST00000414253 ZEB1P37275 1124 aaPredicted RBP38.71■■■■□ 3.79
FAAP20-206ENST00000414253 BAZ1BQ9UIG0 1483 aaKnown RBP38.7■■■■□ 3.79
FAAP20-206ENST00000414253 EHMT2Q96KQ7 1210 aa38.68■■■■□ 3.78
FAAP20-206ENST00000414253 NCAPD3P42695 1498 aa38.41■■■■□ 3.74
FAAP20-206ENST00000414253 SOGA1O94964 1423 aa38.37■■■■□ 3.73
FAAP20-206ENST00000414253 WRNQ14191 1432 aaPredicted RBP eCLIP38.36■■■■□ 3.73
FAAP20-206ENST00000414253 HMGXB3Q12766 1538 aa38.3■■■■□ 3.72
FAAP20-206ENST00000414253 EEA1Q15075 1411 aa38.26■■■■□ 3.72
FAAP20-206ENST00000414253 SYNJ1O43426 1573 aa38.2■■■■□ 3.71
FAAP20-206ENST00000414253 RUSC2Q8N2Y8 1516 aa38.2■■■■□ 3.71
FAAP20-206ENST00000414253 CSRNP3Q8WYN3 585 aa38.14■■■■□ 3.7
FAAP20-206ENST00000414253 TNIKQ9UKE5 1360 aa38■■■■□ 3.67
FAAP20-206ENST00000414253 CC2D2AQ9P2K1 1620 aa38■■■■□ 3.67
FAAP20-206ENST00000414253 CEP162Q5TB80 1403 aa37.95■■■■□ 3.67
FAAP20-206ENST00000414253 GOLGA3Q08378 1498 aa37.89■■■■□ 3.66
FAAP20-206ENST00000414253 TOP2BQ02880 1626 aa37.87■■■■□ 3.65
FAAP20-206ENST00000414253 UBTFP17480 764 aaKnown RBP37.83■■■■□ 3.65
FAAP20-206ENST00000414253 BIVM-ERCC5R4GMW8 1640 aa37.78■■■■□ 3.64
FAAP20-206ENST00000414253 KIF21BO75037 1637 aa37.77■■■■□ 3.64
FAAP20-206ENST00000414253 CEP164Q9UPV0 1460 aa37.76■■■■□ 3.64
FAAP20-206ENST00000414253 CFTRP13569 1480 aa37.75■■■■□ 3.63
FAAP20-206ENST00000414253 SCAF1Q9H7N4 1312 aaKnown RBP37.63■■■■□ 3.61
FAAP20-206ENST00000414253 PELP1Q8IZL8 1130 aaKnown RBP37.61■■■■□ 3.61
FAAP20-206ENST00000414253 CUX1P39880 1505 aa37.57■■■■□ 3.6
FAAP20-206ENST00000414253 CADPSQ9ULU8 1353 aa37.54■■■■□ 3.6
FAAP20-206ENST00000414253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.52■■■■□ 3.6
FAAP20-206ENST00000414253 PRDM2Q13029 1718 aa37.52■■■■□ 3.6
FAAP20-206ENST00000414253 RAPGEF2Q9Y4G8 1499 aa37.49■■■■□ 3.59
FAAP20-206ENST00000414253 CCER1Q8TC90 406 aaPredicted RBP37.49■■■■□ 3.59
FAAP20-206ENST00000414253 CLIP1P30622 1438 aa37.38■■■■□ 3.57
FAAP20-206ENST00000414253 DNAJC5BQ9UF47 199 aa37.33■■■■□ 3.57
FAAP20-206ENST00000414253 TTBK1Q5TCY1 1321 aaPredicted RBP37.3■■■■□ 3.56
FAAP20-206ENST00000414253 PRXQ9BXM0 1461 aa37.3■■■■□ 3.56
FAAP20-206ENST00000414253 ERICH3Q5RHP9 1530 aa37.28■■■■□ 3.56
FAAP20-206ENST00000414253 KIF27Q86VH2 1401 aa37.25■■■■□ 3.55
FAAP20-206ENST00000414253 NESP48681 1621 aa37.21■■■■□ 3.55
FAAP20-206ENST00000414253 VPS8Q8N3P4 1428 aa37.18■■■■□ 3.54
FAAP20-206ENST00000414253 ACIN1Q9UKV3 1341 aaKnown RBP37.15■■■■□ 3.54
FAAP20-206ENST00000414253 FANCD2Q9BXW9 1451 aa37.13■■■■□ 3.53
FAAP20-206ENST00000414253 DIEXFQ68CQ4 756 aaKnown RBP37.08■■■■□ 3.53
FAAP20-206ENST00000414253 RANGAP1P46060 587 aaPredicted RBP37.06■■■■□ 3.52
FAAP20-206ENST00000414253 NEUROD1Q13562 356 aa37■■■■□ 3.51
FAAP20-206ENST00000414253 FGD5Q6ZNL6 1462 aa36.98■■■■□ 3.51
FAAP20-206ENST00000414253 CUX2O14529 1486 aa36.98■■■■□ 3.51
FAAP20-206ENST00000414253 LAMC3Q9Y6N6 1575 aa36.92■■■■□ 3.5
FAAP20-206ENST00000414253 APLP2Q06481 763 aa36.89■■■■□ 3.5
FAAP20-206ENST00000414253 IGF1RP08069 1367 aa36.88■■■■□ 3.49
FAAP20-206ENST00000414253 ARAP1Q96P48 1450 aa36.88■■■■□ 3.49
FAAP20-206ENST00000414253 CENPBP07199 599 aaPredicted RBP36.87■■■■□ 3.49
FAAP20-206ENST00000414253 DNMBPQ6XZF7 1577 aa36.79■■■■□ 3.48
FAAP20-206ENST00000414253 TOPBP1Q92547 1522 aa36.78■■■■□ 3.48
FAAP20-206ENST00000414253 CARMIL1Q5VZK9 1371 aa36.7■■■■□ 3.47
FAAP20-206ENST00000414253 PDS5BQ9NTI5 1447 aa36.7■■■■□ 3.47
FAAP20-206ENST00000414253 ZNF316A6NFI3 1004 aaPredicted RBP36.69■■■■□ 3.46
FAAP20-206ENST00000414253 GTF3C3Q9Y5Q9 886 aa36.69■■■■□ 3.46
FAAP20-206ENST00000414253 RAD54L2Q9Y4B4 1467 aa36.68■■■■□ 3.46
FAAP20-206ENST00000414253 POLA1P09884 1462 aaPredicted RBP36.68■■■■□ 3.46
FAAP20-206ENST00000414253 URB2Q14146 1524 aaKnown RBP36.68■■■■□ 3.46
FAAP20-206ENST00000414253 ARHGAP35Q9NRY4 1499 aa36.67■■■■□ 3.46
FAAP20-206ENST00000414253 ABCA10Q8WWZ4 1543 aa36.61■■■■□ 3.45
FAAP20-206ENST00000414253 KIF21AQ7Z4S6 1674 aa36.57■■■■□ 3.44
FAAP20-206ENST00000414253 HNRNPUL2Q1KMD3 747 aaKnown RBP36.57■■■■□ 3.44
FAAP20-206ENST00000414253 KANK4Q5T7N3 995 aaPredicted RBP36.49■■■■□ 3.43
FAAP20-206ENST00000414253 WDR97A6NE52 1622 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms