RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 NISCHQ9Y2I1 1504 aa11.64□□□□□ -0.55
PRDM2-206ENST00000413440 DCAF8L2P0C7V8 631 aa11.32□□□□□ -0.6
PRDM2-206ENST00000413440 ABCC9O60706 1549 aa10.66□□□□□ -0.7
PRDM2-206ENST00000413440 SHROOM4Q9ULL8 1493 aa10.31□□□□□ -0.76
PRDM2-206ENST00000413440 PABPN1Q86U42 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
PRDM2-206ENST00000413440 CCDC180Q9P1Z9 1646 aa10.11□□□□□ -0.79
PRDM2-206ENST00000413440 RB1CC1Q8TDY2 1594 aa9.93□□□□□ -0.82
PRDM2-206ENST00000413440 SUPT5HO00267 1087 aaKnown RBP9.91□□□□□ -0.82
PRDM2-206ENST00000413440 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
PRDM2-206ENST00000413440 NACADO15069 1562 aa9.73□□□□□ -0.85
PRDM2-206ENST00000413440 EHMT2Q96KQ7 1210 aa9.61□□□□□ -0.87
PRDM2-206ENST00000413440 FAM9AQ8IZU1 332 aaPredicted RBP9.6□□□□□ -0.87
PRDM2-206ENST00000413440 ZCCHC6Q5VYS8 1495 aaKnown RBP9.58□□□□□ -0.88
PRDM2-206ENST00000413440 TTBK1Q5TCY1 1321 aaPredicted RBP9.53□□□□□ -0.88
PRDM2-206ENST00000413440 ERCC6Q03468 1493 aa9.52□□□□□ -0.89
PRDM2-206ENST00000413440 FBLN2P98095 1184 aa9.49□□□□□ -0.89
PRDM2-206ENST00000413440 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.89
PRDM2-206ENST00000413440 RANGAP1P46060 587 aaPredicted RBP9.45□□□□□ -0.9
PRDM2-206ENST00000413440 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
PRDM2-206ENST00000413440 ATP1B4Q9UN42 357 aaPredicted RBP9.34□□□□□ -0.91
PRDM2-206ENST00000413440 TRIM41Q8WV44 630 aa9.33□□□□□ -0.92
PRDM2-206ENST00000413440 BAZ1BQ9UIG0 1483 aaKnown RBP9.31□□□□□ -0.92
PRDM2-206ENST00000413440 CC2D2AQ9P2K1 1620 aa9.28□□□□□ -0.92
PRDM2-206ENST00000413440 DCAF1Q9Y4B6 1507 aa9.24□□□□□ -0.93
PRDM2-206ENST00000413440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.23□□□□□ -0.93
PRDM2-206ENST00000413440 HNRNPUL2Q1KMD3 747 aaKnown RBP9.23□□□□□ -0.93
PRDM2-206ENST00000413440 EIF4G1Q04637 1599 aaKnown RBP9.22□□□□□ -0.93
PRDM2-206ENST00000413440 UNC13AQ9UPW8 1703 aa9.21□□□□□ -0.94
PRDM2-206ENST00000413440 MYT1LQ9UL68 1186 aa9.2□□□□□ -0.94
PRDM2-206ENST00000413440 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
PRDM2-206ENST00000413440 MYO15BQ96JP2 1530 aa9.18□□□□□ -0.94
PRDM2-206ENST00000413440 SMARCA2P51531 1590 aa9.15□□□□□ -0.94
PRDM2-206ENST00000413440 CHMP7Q8WUX9 453 aaPredicted RBP9.13□□□□□ -0.95
PRDM2-206ENST00000413440 BAZ1AQ9NRL2 1556 aaPredicted RBP9.13□□□□□ -0.95
PRDM2-206ENST00000413440 UBTFP17480 764 aaKnown RBP9.12□□□□□ -0.95
PRDM2-206ENST00000413440 BICRAQ9NZM4 1560 aa9.1□□□□□ -0.95
PRDM2-206ENST00000413440 PDS5BQ9NTI5 1447 aa9.1□□□□□ -0.95
PRDM2-206ENST00000413440 NPM1P06748 294 aaKnown RBP eCLIP9.06□□□□□ -0.96
PRDM2-206ENST00000413440 APLP2Q06481 763 aa9.06□□□□□ -0.96
PRDM2-206ENST00000413440 SMARCA4P51532 1647 aa9.05□□□□□ -0.96
PRDM2-206ENST00000413440 ARID3CA6NKF2 412 aa9.04□□□□□ -0.96
PRDM2-206ENST00000413440 PLPPR3Q6T4P5 718 aa9.04□□□□□ -0.96
PRDM2-206ENST00000413440 ATAD2BQ9ULI0 1458 aa9.04□□□□□ -0.96
PRDM2-206ENST00000413440 MROH2BQ7Z745 1585 aa9.03□□□□□ -0.96
PRDM2-206ENST00000413440 CHIC1Q5VXU3 224 aa9.02□□□□□ -0.97
PRDM2-206ENST00000413440 WIZO95785 1651 aa9.02□□□□□ -0.97
PRDM2-206ENST00000413440 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
PRDM2-206ENST00000413440 NESP48681 1621 aa8.99□□□□□ -0.97
PRDM2-206ENST00000413440 RSF1Q96T23 1441 aaPredicted RBP8.98□□□□□ -0.97
PRDM2-206ENST00000413440 AEBP2Q6ZN18 517 aaPredicted RBP8.96□□□□□ -0.98
PRDM2-206ENST00000413440 P3H3Q8IVL6 736 aa8.95□□□□□ -0.98
PRDM2-206ENST00000413440 OSCARQ8IYS5 282 aa8.95□□□□□ -0.98
PRDM2-206ENST00000413440 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
PRDM2-206ENST00000413440 CYB5RLQ6IPT4 315 aa8.93□□□□□ -0.98
PRDM2-206ENST00000413440 FANCD2Q9BXW9 1451 aa8.92□□□□□ -0.98
PRDM2-206ENST00000413440 NCAPD3P42695 1498 aa8.9□□□□□ -0.99
PRDM2-206ENST00000413440 CCDC88BA6NC98 1476 aa8.88□□□□□ -0.99
PRDM2-206ENST00000413440 TOP2AP11388 1531 aaKnown RBP8.86□□□□□ -0.99
PRDM2-206ENST00000413440 MRC2Q9UBG0 1479 aa8.86□□□□□ -0.99
PRDM2-206ENST00000413440 SOGA1O94964 1423 aa8.85□□□□□ -0.99
PRDM2-206ENST00000413440 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
PRDM2-206ENST00000413440 KCNH8Q96L42 1107 aa8.83□□□□□ -1
PRDM2-206ENST00000413440 HMGXB3Q12766 1538 aa8.8□□□□□ -1
PRDM2-206ENST00000413440 ARID4BQ4LE39 1312 aaPredicted RBP8.79□□□□□ -1
PRDM2-206ENST00000413440 ESF1Q9H501 851 aaKnown RBP8.79□□□□□ -1
PRDM2-206ENST00000413440 LAMC3Q9Y6N6 1575 aa8.77□□□□□ -1.01
PRDM2-206ENST00000413440 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
PRDM2-206ENST00000413440 CUX2O14529 1486 aa8.76□□□□□ -1.01
PRDM2-206ENST00000413440 WRNQ14191 1432 aaPredicted RBP eCLIP8.75□□□□□ -1.019e-6■■■■■ 50.1
PRDM2-206ENST00000413440 PCGF6Q9BYE7 350 aa8.75□□□□□ -1.01
PRDM2-206ENST00000413440 AQRO60306 1485 aaKnown RBP eCLIP8.75□□□□□ -1.01
PRDM2-206ENST00000413440 PELP1Q8IZL8 1130 aaKnown RBP8.74□□□□□ -1.01
PRDM2-206ENST00000413440 KIF21AQ7Z4S6 1674 aa8.72□□□□□ -1.01
PRDM2-206ENST00000413440 PPARGC1BQ86YN6 1023 aaKnown RBP8.72□□□□□ -1.01
PRDM2-206ENST00000413440 RAD54L2Q9Y4B4 1467 aa8.72□□□□□ -1.01
PRDM2-206ENST00000413440 ITGAEP38570 1179 aa8.72□□□□□ -1.01
PRDM2-206ENST00000413440 ABCC8Q09428 1581 aa8.71□□□□□ -1.01
PRDM2-206ENST00000413440 BCANQ96GW7 911 aa8.7□□□□□ -1.02
PRDM2-206ENST00000413440 IFT140Q96RY7 1462 aa8.68□□□□□ -1.02
PRDM2-206ENST00000413440 KIF27Q86VH2 1401 aa8.68□□□□□ -1.02
PRDM2-206ENST00000413440 FGD5Q6ZNL6 1462 aa8.66□□□□□ -1.02
PRDM2-206ENST00000413440 CSRNP3Q8WYN3 585 aa8.66□□□□□ -1.02
PRDM2-206ENST00000413440 CDK11AQ9UQ88 783 aaPredicted RBP8.65□□□□□ -1.02
PRDM2-206ENST00000413440 FAM69CQ0P6D2 419 aa8.64□□□□□ -1.03
PRDM2-206ENST00000413440 CFTRP13569 1480 aa8.64□□□□□ -1.03
PRDM2-206ENST00000413440 DNAJC5Q9H3Z4 198 aa8.63□□□□□ -1.03
PRDM2-206ENST00000413440 MLECQ14165 292 aa8.63□□□□□ -1.03
PRDM2-206ENST00000413440 SNAPC4Q5SXM2 1469 aa8.63□□□□□ -1.03
PRDM2-206ENST00000413440 GAPVD1Q14C86 1478 aa8.63□□□□□ -1.03
PRDM2-206ENST00000413440 FAM50AQ14320 339 aaKnown RBP8.62□□□□□ -1.03
PRDM2-206ENST00000413440 TOPBP1Q92547 1522 aa8.62□□□□□ -1.03
PRDM2-206ENST00000413440 LOC105371045A0A1W2PR82 267 aa8.61□□□□□ -1.03
PRDM2-206ENST00000413440 CARMIL2Q6F5E8 1435 aa8.61□□□□□ -1.03
PRDM2-206ENST00000413440 JPH4Q96JJ6 628 aa8.61□□□□□ -1.03
PRDM2-206ENST00000413440 CARMIL1Q5VZK9 1371 aa8.6□□□□□ -1.03
PRDM2-206ENST00000413440 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.03
PRDM2-206ENST00000413440 SENP3Q9H4L4 574 aaPredicted RBP8.59□□□□□ -1.03
PRDM2-206ENST00000413440 URB2Q14146 1524 aaKnown RBP8.58□□□□□ -1.04
PRDM2-206ENST00000413440 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
PRDM2-206ENST00000413440 DNMBPQ6XZF7 1577 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms